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SZDB2.0
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SNP
PGC2 GWAS
CLOZUK + PGC2 GWAS
Functional SNPs
Gene
Genes expressed differentially in SZ
Genes identified by integrative analysis
Genes identified by GWAS
Genes affected by CNVs
Genes identified by linkage and association study
Genes identified by exome sequencing
Genes differentially methylated in SZ
Genes identified by expression imputation
Gene browser system
CNV
Others
Gene eQTL query
Methylation QTL query
Static LocusZoom
Protein-Protein interaction
Polygenic Risk Score
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Manual
About Us
(current)
Association plot with LocusZoom
(Fill
only
one of these three tabs)
SNP
Gene
Region
Step1: Input LocusZoom information
SNP
Flanking size
kb
Example for LocusZoom information
SNP rs1979
Flanking size 100kb
Step1: Input LocusZoom information
Gene
Flanking size
kb
Example for LocusZoom information
BTN3A2
Flanking size 50kb
Step1: Input LocusZoom information
Chromosome
chr1
chr2
chr3
chr4
chr5
chr6
chr7
chr8
chr9
chr10
chr11
chr12
chr13
chr14
chr15
chr16
chr17
chr18
chr19
chr20
chr21
chr22
chrX
Genome Position
-
bp
Example for LocusZoom information
Chromosome chr1
Genome Position 2000000 - 2050000 bp
Step2: Select a GWAS
PGC2
CLOZUK + PGC2
Example for GWAS
CLOZUK + PGC2
Step3: Select a LD population
Population
EUR
ASN
AMR
AFR
Example for LD population
EUR
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