Transcript eQTL query


Step1: select a dataset

CMC             PsychENCODE            

Step2: input genes

or - Input SNPs

Step2: input SNPs

MXRA8
BTN3A2

or - Input SNPs

rs2298213
rs1979

Where does this data come from?

We collected gene expression quantitative trait loci (eQTL) data from the following studies:

  1. CommonMind Consortium (CMC, http://www.synapse.org/CMC) eQTL: Fromer et al. 2016. Gene expression elucidates functional impact of polygenic risk for schizophrenia. Nature Neuroscience, 19(11):1442-1453. [PMID: 27668389]
  2. PsychENCODE (http://resource.psychencode.org/) eQTL: Wang et al. 2018. Comprehensive functional genomic resource and integrative model for the human brain. Science, 362(6420). pii: eaat8464. [PMID: 30545857]
If you used this data, please cite the reletive reference.