Genes identified by convergent functional genomics

Symbol Entrez Id Position Location Description Type aCFG score Reference LocusZoom
ADCYAP1116chr18:904944..91217318p11adenylate cyclase activating polypeptide 1 (pituitary)protein-coding4.0Ayalew et al., 2012
ALDH1A1216chr9:75515578..755682339q21.13aldehyde dehydrogenase 1 family, member A1protein-coding4.0Ayalew et al., 2012
ANK3288chr10:61786056..6249328410q21ankyrin 3, node of Ranvier (ankyrin G)protein-coding4.0Ayalew et al., 2012
BDNF627chr11:27676440..2774360511p13brain-derived neurotrophic factorprotein-coding4.0Ayalew et al., 2012
CD9928chr12:6309482..634743712p13.3CD9 moleculeprotein-coding4.0Ayalew et al., 2012
CNR11268chr6:88849583..888757676q14-q15cannabinoid receptor 1 (brain)protein-coding4.0Ayalew et al., 2012
COMT1312chr22:19929263..1995749822q11.21catechol-O-methyltransferaseprotein-coding4.0Ayalew et al., 2012
CPLX210814chr5:175223610..1753110235q35.2complexin 2protein-coding4.0Ayalew et al., 2012
DISC127185chr1:231762561..2321770181q42.1disrupted in schizophrenia 1protein-coding5.0Ayalew et al., 2012
DRD21813chr11:113280317..11334600111q23dopamine receptor D2protein-coding4.0Ayalew et al., 2012
DTNBP184062chr6:15523032..156632896p22.3dystrobrevin binding protein 1protein-coding4.0Ayalew et al., 2012
FABP72173chr6:123100646..1231052196q22-q23fatty acid binding protein 7, brainprotein-coding4.0Ayalew et al., 2012
GABRB32562chr15:26788693..2701893515q12gamma-aminobutyric acid (GABA) A receptor, beta 3protein-coding4.0Ayalew et al., 2012
GAD12571chr2:171673200..1717176612q31glutamate decarboxylase 1protein-coding4.0Ayalew et al., 2012
GNB1L54584chr22:19775934..1984246222q11.2guanine nucleotide binding protein (G protein), beta polypeptide 1-likeprotein-coding4.0Ayalew et al., 2012
GRIA12890chr5:152870084..1531934295q31.1glutamate receptor, ionotropic, AMPA 1protein-coding4.0Ayalew et al., 2012
GRIA42893chr11:105480800..10585281911q22glutamate receptor, ionotropic, AMPA 4protein-coding4.0Ayalew et al., 2012
GRIN2B2904chr12:13714410..1413302212p12glutamate receptor, ionotropic, N-methyl D-aspartate 2Bprotein-coding4.0Ayalew et al., 2012
GRM52915chr11:88237744..8879681611q14.3glutamate receptor, metabotropic 5protein-coding4.0Ayalew et al., 2012
GSN2934chr9:124030380..1240951209q33gelsolinprotein-coding4.0Ayalew et al., 2012
HINT13094chr5:130494875..1305010345q31.2histidine triad nucleotide binding protein 1protein-coding4.0Ayalew et al., 2012
HSPA1B3304chr6:3305094..33076166p21.3heat shock 70kDa protein 1Bprotein-coding5.0Ayalew et al., 2012
HTR2A3356chr13:47407513..4747116913q14-q215-hydroxytryptamine (serotonin) receptor 2A, G protein-coupledprotein-coding4.0Ayalew et al., 2012
KALRN8997chr3:123813558..1244400363q21.2kalirin, RhoGEF kinaseprotein-coding4.0Ayalew et al., 2012
KIF2A3796chr5:61601989..616822105q12-q13kinesin heavy chain member 2Aprotein-coding4.0Ayalew et al., 2012
MBP4155chr18:74690789..7484477418q23myelin basic proteinprotein-coding5.0Ayalew et al., 2012
MOBP4336chr3:39509070..395678593p22.1myelin-associated oligodendrocyte basic proteinprotein-coding4.5Ayalew et al., 2012
NCAM14684chr11:112831969..11314915811q23.1neural cell adhesion molecule 1protein-coding4.5Ayalew et al., 2012
NDUFV24729chr18:9102628..913434318p11.22NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDaprotein-coding4.5Ayalew et al., 2012
NR4A24929chr2:157180944..1571892872q22-q23nuclear receptor subfamily 4, group A, member 2protein-coding4.0Ayalew et al., 2012
NRCAM4897chr7:107788071..1080968417q31neuronal cell adhesion moleculeprotein-coding4.5Ayalew et al., 2012
NRG13084chr8:31496820..326225588p12neuregulin 1protein-coding4.0Ayalew et al., 2012
PDE4B5142chr1:66258193..668402621p31phosphodiesterase 4B, cAMP-specificprotein-coding4.0Ayalew et al., 2012
PRKCA5578chr17:64298926..6480686217q22-q23.2protein kinase C, alphaprotein-coding4.0Ayalew et al., 2012
RAB1822931chr10:27793249..2782909910p12.1RAB18, member RAS oncogene familyprotein-coding4.5Ayalew et al., 2012
RELN5649chr7:103112231..1036299637q22reelinprotein-coding4.0Ayalew et al., 2012
RGS45999chr1:163038396..1630465921q23.3regulator of G-protein signaling 4protein-coding4.0Ayalew et al., 2012
SLC1A26506chr11:35272752..3544153211p13-p12solute carrier family 1 (glial high affinity glutamate transporter), member 2protein-coding4.0Ayalew et al., 2012
SNAP256616chr20:10199477..1028806520p12-p11.2synaptosome associated protein 25kDaprotein-coding4.0Ayalew et al., 2012
SYN26854chr3:12045862..122335323p25synapsin IIprotein-coding4.0Ayalew et al., 2012
TCF46925chr18:52889562..5325586018q21.1transcription factor 4protein-coding5.0Ayalew et al., 2012
TNIK23043chr3:170780292..1711781973q26.31TRAF2 and NCK interacting kinaseprotein-coding4.0Ayalew et al., 2012
Symbol Id Position Location Description Type CFG score Reference LocusZoom

Note:
aCFG score: CFG score was evaluated by six evidence: 1) Databases; 2) Human postmortem brain gene expression evidence; 3) Human blood and other peripheral tissue gene
                   expression data; 4) Human genetic evidence (association, CNVs, linkage); 5) Animal model brain and blood gene expression evidence; 6) Animal model genetic
                   evidence (transgenic). All six cross-validating lines of evidence (other human data, animal model data) were weighted equally, receiving a maximum of 1 point
                   each (for human genetic evidence: 0.5 points if it is linkage, 0.75 if it is from CNVs, 1 point if it is association). For more details, please refer to the following
                   reference.
Data source: Ayalew et al. Convergent functional genomics of schizophrenia: from comprehensive understanding to genetic risk prediction. Molecular Psychiatry, 17(9): 887-
                   905(2012).