HTR2A

Basic Information

Gene Symbol	HTR2A
Entrez Id	3356
Position	chr13:47407513..47471169
Description	5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled
Gene type	protein-coding

SNP Information

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SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs1002513	13:47454440	A/G	HTR2A	intron	1.000	0.99372	0.0132	0.6336		7
rs1033847	13:47469335	T/C	HTR2A	intron	0.993	0.96977	0.0243	0.2064		7
rs112193154	13:47433825	A/G	HTR2A	intron	0.646	0.94497	0.0274	0.03924		5
rs113919495	13:47421294	A/T	HTR2A	intron	0.850	1.03448	0.0393	0.3885		7
rs115353156	13:47458416	A/C	HTR2A	intron	0.995	0.99990	0.0276	0.9971		7
rs117047261	13:47455444	A/G	HTR2A	intron	0.746	0.93725	0.0551	0.2393		6
rs117222059	13:47406657	A/G	HTR2A	untranslated-3	0.887	0.98531	0.0378	0.6962		7
rs117230475	13:47466384	T/C	HTR2A	intron	0.853	1.00130	0.0432	0.9758		5
rs117388050	13:47452169	T/C	HTR2A	intron	0.921	1.08199	0.0355	0.02649		7
rs117527334	13:47462743	A/T	HTR2A	intron	0.727	1.05665	0.0631	0.3824		7
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Showing 1 to 10 of 184 entries

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Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information