SLC1A2

Basic Information
Gene SymbolSLC1A2
Entrez Id6506
Positionchr11:35272752..35441532
Descriptionsolute carrier family 1 (glial high affinity glutamate transporter), member 2
Gene typeprotein-coding
SNP Information

SNPPositionAlelleGeneAnnotationInfoOrSeP-valueeQTLScore*
rs100152511:35434662A/TSLC1A2intron0.9671.008940.01500.55336
rs104211311:35308369T/CSLC1A2coding-synon1.0001.002500.01210.83467
rs104310111:35274829A/GSLC1A2untranslated-30.9981.003710.01070.72695
rs1044427111:35289757T/CSLC1A2intron1.0001.004210.01290.74286
rs1048881511:35286768A/GSLC1A2intron0.7261.030760.05680.59367
rs1048881611:35311418T/CSLC1A2intron1.0001.003210.01210.79354
rs1048881711:35312145A/TSLC1A2intron1.0000.996900.01210.79537
rs1048881811:35312380T/CSLC1A2intron1.0000.996610.01210.78085
rs1050113711:35430288T/CSLC1A2intron0.9991.002300.01090.83436
rs1050113811:35430439T/CSLC1A2intron0.9991.002300.01090.83327
SNPPositionAlelleGeneAnnotationInfoOrSeP-valueeQTLScore*
Showing 1 to 10 of 438 entries

  Note: RegulomeDB score*
score supporting data score supporting data
1aeQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak6other
2aTF binding + matched TF motif + matched DNase Footprint + DNase peak5TF binding or DNase peak
1beQTL + TF binding + any motif + DNase Footprint + DNase peak4TF binding + DNase peak
2bTF binding + any motif + DNase Footprint + DNase peak3bTF binding + matched TF motif
1ceQTL + TF binding + matched TF motif + DNase peak1feQTL + TF binding / DNase peak
2cTF binding + matched TF motif + DNase peak3aTF binding + any motif + DNase peak
1deQTL + TF binding + any motif + DNase peak1eeQTL + TF binding + matched TF motif
CNV Information

The gene is not affected by CNV!

eQTL Information