PRKCA

Basic Information

Gene Symbol	PRKCA
Entrez Id	5578
Position	chr17:64298926..64806862
Description	protein kinase C, alpha
Gene type	protein-coding

SNP Information

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SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs1003425	17:64552899	A/G	PRKCA	intron	0.971	0.99820	0.0117	0.8757		7
rs1003598	17:64551407	A/C	PRKCA	intron	0.988	1.00592	0.0106	0.5746		7
rs1005651	17:64438011	A/C	PRKCA	intron	0.986	1.00441	0.0114	0.7032		7
rs1006841	17:64633239	T/C	PRKCA	intron	0.991	1.00743	0.0105	0.4801		7
rs1010544	17:64687446	A/G	PRKCA	intron	0.994	1.00411	0.0124	0.7416		5
rs1010546	17:64684565	T/C	PRKCA	intron	0.996	1.00010	0.0156	0.9942		7
rs10401064	17:64658871	A/T	PRKCA	intron	1.000	0.99332	0.0107	0.5316		2b
rs10451280	17:64621079	C/G	PRKCA	intron	0.995	1.00190	0.0197	0.9218		5
rs10451281	17:64621185	A/G	PRKCA	intron	0.974	0.99860	0.0197	0.9427		5
rs10491200	17:64703877	T/C	PRKCA	intron	1.000	1.01888	0.0214	0.3828		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Showing 1 to 10 of 1,498 entries

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Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information