COMT

Basic Information

Gene Symbol	COMT
Entrez Id	1312
Position	chr22:19929263..19957498
Description	catechol-O-methyltransferase
Gene type	protein-coding

SNP Information

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SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs1109436	22:19953882	T/C	COMT	intron,near-gene-3	0.972	0.98847	0.0147	0.4327		4
rs111450487	22:19945817	A/G	COMT	intron	0.720	0.97006	0.0617	0.6228		6
rs112080665	22:19938759	A/G	COMT	intron,near-gene-5	0.932	1.00541	0.0259	0.8338		7
rs113099378	22:19938617	T/G	COMT	intron,near-gene-5	0.769	1.02378	0.0154	0.1262		7
rs113208324	22:19944496	T/C	COMT	intron	0.870	0.99332	0.0170	0.6922		6
rs117222687	22:19956014	C/G	COMT	intron	0.810	1.00582	0.0242	0.8091		4
rs11912353	22:19947341	A/G	COMT	intron	0.746	1.02347	0.0130	0.07488		2b
rs11912354	22:19947347	C/G	COMT	intron	0.737	1.02984	0.0128	0.02165		4
rs12053782	22:19932095	T/C	COMT	intron	0.997	1.01430	0.0118	0.2282		6
rs13054814	22:19943895	T/C	COMT	intron	0.846	1.00371	0.0175	0.833		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Showing 1 to 10 of 90 entries

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Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

Reference	Study type	Sample size
18668038	GWAS	3391 cases; 3181 controls
18511947	GWAS	359 cases; 718 controls
20489179	GWAS	977 cases; 2000 controls
21489405	GWAS	834 cases; 672 controls
19181681	GWAS	471 cases; 2792 controls
Reference	Study type	Sample size

eQTL Information