CPLX2

Basic Information
Gene SymbolCPLX2
Entrez Id10814
Positionchr5:175223610..175311023
Descriptioncomplexin 2
Gene typeprotein-coding
SNP Information

SNPPositionAlelleGeneAnnotationInfoOrSeP-valueeQTLScore*
rs10011205:175249549A/GCPLX2intron0.9930.994420.01860.7622b
rs100521845:175298874A/GCPLX2intron0.9880.995310.01130.67974
rs100569165:175283493A/GCPLX2intron0.9861.030870.01720.076855
rs100569205:175283498T/GCPLX2intron0.9851.030970.01720.076025
rs100610595:175261050A/GCPLX2intron1.0001.000600.01310.96565
rs100629225:175252691T/CCPLX2intron0.9891.001200.01330.92945
rs100644855:175310195A/CCPLX2untranslated-30.9660.998200.01140.87575
rs100651795:175262845A/GCPLX2intron0.9950.986690.01220.27036
rs100728605:175262693T/GCPLX2intron0.9981.004610.01070.66977
rs100768675:175273481T/GCPLX2intron0.9960.990640.01070.37927
rs10173065:175248625A/GCPLX2intron0.9731.017550.01550.26075
rs104756235:175262264A/GCPLX2intron1.0001.010050.01090.35526
rs104761705:175247862T/CCPLX2intron1.0000.990640.01170.42155
rs104761715:175261856A/GCPLX2intron0.9850.999800.01320.98737
rs105161325:175282343A/GCPLX2intron1.0101.005110.01420.725
rs108666885:175239610C/GCPLX2intron0.9931.000800.01310.94955
rs108666905:175271761A/TCPLX2intron0.9740.973950.01370.053097
rs108666915:175277599T/CCPLX2intron0.9630.985410.01090.17664
rs108666925:175310383C/GCPLX2untranslated-30.9761.002400.01070.8251f
rs1114785465:175287592A/GCPLX2intron,near-gene-50.6050.985010.03150.63216
rs1123386915:175266320A/GCPLX2intron0.9241.045920.02370.058246
rs1128420805:175248251T/CCPLX2intron0.6771.050640.04740.29795
rs1130489795:175263209T/CCPLX2intron0.8900.950850.02380.033816
rs1140586195:175262896T/CCPLX2intron0.6771.001500.04090.9716
rs1146085315:175294461A/CCPLX2intron0.8261.092430.04340.041885
rs1147668135:175272550A/GCPLX2intron0.9200.963290.03200.2425
rs1148214575:175292787A/CCPLX2intron0.9710.956380.02350.058297
rs1149501915:175304354A/TCPLX2intron0.7201.039870.04340.36745
rs1155521645:175234575A/TCPLX2intron0.9800.942140.03610.099115
rs1158816355:175260115T/CCPLX2intron0.9940.962620.02250.091397
rs1164080115:175289692T/CCPLX2intron0.7381.112490.03720.0041575
rs1164676675:175259571T/CCPLX2intron0.8080.984030.03880.67845
rs1165312265:175267526A/GCPLX2intron0.6281.072400.04060.085214
rs1165583745:175253632A/GCPLX2intron0.9850.943270.03570.10175
rs1165915855:175293385A/CCPLX2intron0.9190.963970.03320.26855
rs1166873795:175253103T/CCPLX2intron0.8801.093190.04960.072534
rs117453985:175234156A/GCPLX2intron1.0001.002900.01330.82616
rs117487895:175273224C/GCPLX2intron0.9201.030870.03180.3395
rs119511575:175239836T/GCPLX2intron1.0101.010860.01400.44045
rs121881525:175264275C/GCPLX2intron0.9910.992530.01280.55835
rs123325465:175311159T/CCPLX2near-gene-30.9721.010350.02000.60735
rs125199565:175234780A/GCPLX2intron1.0001.002800.01330.83277
rs125205575:175241153C/GCPLX2intron1.0001.005820.01080.59433a
rs125221185:175267971A/GCPLX2intron0.9290.961560.02050.055155
rs125223685:175304682A/TCPLX2intron0.9811.003000.01100.78465
rs126528465:175292620A/GCPLX2intron0.9961.002900.01120.79827
rs126569725:175292583A/GCPLX2intron0.9960.997500.01120.82347
rs131581145:175264185A/GCPLX2intron0.9600.978630.01500.14875
rs131630875:175234857A/GCPLX2intron0.9911.001400.01340.91747
rs131662135:175311357A/GCPLX2near-gene-30.9750.995010.01090.6492b
rs131747275:175275485T/CCPLX2intron0.9901.022040.01510.14854
rs131785605:175228477T/CCPLX2intron0.9970.975110.01310.053845
rs131843755:175238999A/GCPLX2intron1.0000.997300.01320.83936
rs131845345:175261704C/GCPLX2intron1.0001.000900.01310.94767
rs131868755:175240972T/CCPLX2intron1.0000.997100.01320.8275
rs131868815:175240980T/CCPLX2intron1.0000.997100.01320.8275
rs131889935:175239440T/CCPLX2intron0.9911.002500.01320.85191f
rs133625665:175287440A/GCPLX2intron,near-gene-50.9480.990640.02930.74956
rs134365825:175235351T/CCPLX2intron1.0000.989260.01400.43956
rs13661165:175297531T/CCPLX2intron,near-gene-50.9981.002600.01100.81415
rs1386904085:175264364A/TCPLX2intron0.8461.067050.04930.1882-
rs1393700895:175238709A/GCPLX2intron0.8271.087850.03800.02681-
rs1415440255:175283927T/CCPLX2intron0.6590.919800.05840.1525-
rs1425138735:175311451A/GCPLX2near-gene-30.8690.934450.04320.1161-
rs1439070285:175277519T/CCPLX2intron0.9631.045300.03140.1588-
rs1455079405:175266372T/CCPLX2intron0.9101.035410.04300.4184-
rs1456728775:175287541A/TCPLX2intron,near-gene-50.7940.952940.04520.286-
rs1479765895:175222464A/GCPLX2near-gene-50.8570.967150.05120.5136-
rs1495216275:175261068A/CCPLX2intron0.8531.022860.05410.6753-
rs1503137875:175311300C/GCPLX2near-gene-30.6941.049280.04830.3189-
rs15449235:175268492A/GCPLX2intron0.9981.011870.01650.47445
rs15449245:175268379T/CCPLX2intron0.9970.988960.01650.50165
rs15600315:175230907A/GCPLX2intron0.9990.973950.01320.044745
rs15600325:175231723A/GCPLX2intron0.9991.004810.01100.66596
rs15600335:175286271A/CCPLX2intron0.9911.002300.01130.84147
rs15600345:175308060T/CCPLX2untranslated-30.9970.993520.01060.5441f
rs15600355:175260760T/GCPLX2intron1.0100.994020.01140.59595
rs15600365:175260372A/GCPLX2intron1.0100.990640.01070.38115
rs170655115:175238278C/GCPLX2intron0.9991.022650.01140.049387
rs170655195:175240469T/CCPLX2intron1.0101.011060.01400.43066
rs170655225:175242385T/CCPLX2intron1.0100.992330.01530.61595
rs170655245:175245365A/CCPLX2intron1.0101.011060.01380.4267
rs170655255:175245433A/GCPLX2intron1.0000.998100.01510.90145
rs170655345:175252471C/GCPLX2intron0.9901.004510.01860.80937
rs170655355:175253734C/GCPLX2intron0.9891.004310.01250.73065
rs170655375:175258762T/CCPLX2intron0.9931.038520.02270.094985
rs170655565:175265147A/GCPLX2intron0.9941.011060.01650.50425
rs170655755:175278252A/TCPLX2intron0.9721.046030.02320.052495
rs177620825:175241957T/CCPLX2intron0.9961.040600.02140.062774
rs177678315:175256368T/CCPLX2intron0.9251.054220.02530.036835
rs178302115:175274576A/CCPLX2intron0.8660.987780.03760.74434
rs1842754155:175263221T/CCPLX2intron0.7871.137580.05530.01986-
rs1845896645:175263307T/CCPLX2intron0.7180.966090.03840.3689-
rs1846577795:175263152A/GCPLX2intron0.7571.010560.02790.7072-
rs1854490435:175236326T/CCPLX2intron0.6621.020810.06280.743-
rs1879912935:175263180T/CCPLX2intron0.9790.954180.02310.04283-
rs1898475515:175254523T/CCPLX2intron0.7210.965410.05790.5437-
rs1916352665:175300005A/GCPLX2intron0.7150.951130.04790.2954-
rs1923026065:175226563A/TCPLX2intron0.6920.974430.01540.09204-
rs19657095:175248575T/CCPLX2intron0.9901.000400.01620.98037
rs19657105:175248571T/CCPLX2intron0.9821.003810.01640.81647
rs19750125:175260122A/GCPLX2intron1.0001.002200.01220.8557
rs20597845:175233642T/CCPLX2intron0.9850.974630.01310.050657
rs20597855:175233730T/CCPLX2intron0.9980.974720.01320.051657
rs21149675:175267342A/GCPLX2intron0.9991.012170.01650.46133a
rs22434045:175223616A/GCPLX2untranslated-50.9980.974920.01310.053355
rs22450695:175225361A/GCPLX2intron1.0000.996210.01330.77375
rs22450765:175225229T/CCPLX2intron1.0000.996210.01330.77285
rs22450785:175225188T/GCPLX2intron0.9970.974240.01320.047615
rs22450805:175225129C/GCPLX2intron0.9980.994910.01100.64474
rs22479165:175223454T/GCPLX2near-gene-50.9980.975500.01310.05895
rs22883885:175310713T/CCPLX2untranslated-30.9490.986690.01440.35062b
rs23821185:175230670A/GCPLX2intron0.6661.019180.05100.70936
rs23821205:175231947C/GCPLX2intron1.0000.974040.01320.045247
rs23821215:175244282A/GCPLX2intron1.0101.010760.01250.39027
rs23821225:175244377T/CCPLX2intron0.9930.997700.01660.88857
rs23821235:175244408A/GCPLX2intron0.9991.005720.01090.59957
rs24342355:175226150C/GCPLX2intron1.0000.996210.01330.77727
rs24342365:175225524C/GCPLX2intron0.9980.994910.01100.64157
rs24342375:175224905A/CCPLX2intron0.9980.974530.01310.049694
rs24342385:175224422C/GCPLX2intron0.9710.988370.01130.30185
rs24342395:175221644T/CCPLX2near-gene-50.9981.025210.01310.057286
rs24435405:175221857A/GCPLX2near-gene-50.9980.975700.01300.05775
rs24435415:175221988T/CCPLX2near-gene-50.9990.975600.01300.057165
rs24435425:175222323T/CCPLX2near-gene-50.9981.025110.01300.056536
rs24435435:175222418T/CCPLX2near-gene-50.9980.975700.01300.05857
rs24435445:175224281A/GCPLX2intron0.9950.976770.01320.073824
rs31802495:175310525A/GCPLX2untranslated-30.9631.005110.01150.66144
rs31994275:175309921A/GCPLX2untranslated-30.9161.005010.01370.71624
rs38226745:175307256T/CCPLX2untranslated-30.9850.995010.01060.63762b
rs38607735:175224763C/GCPLX2intron0.9990.996110.01470.78882b
rs38929095:175305591T/CCPLX2intron0.9811.002000.01120.86025
rs39290645:175260928T/GCPLX2intron1.0000.991240.01150.44395
rs42421875:175244097T/CCPLX2intron1.0000.975310.01120.025617
rs43453355:175299448T/GCPLX2intron0.9450.993320.02720.80565
rs43702935:175296993A/GCPLX2intron,near-gene-50.9891.002500.01100.825
rs48678055:175226346A/CCPLX2intron0.6061.030970.02580.23756
rs48678065:175266835A/GCPLX2intron0.9991.000100.01110.99216
rs48678075:175276859A/CCPLX2intron0.9740.975310.01320.058765
rs48678085:175301715A/GCPLX2intron0.9810.995210.01130.67185
rs48678095:175308022A/GCPLX2untranslated-30.9940.993920.01060.56175
rs48685375:175263950A/TCPLX2intron0.9971.000600.01110.95675
rs48685385:175275598A/GCPLX2intron0.9910.981570.01280.14425
rs48685395:175279441A/GCPLX2intron0.9790.993520.01070.5465
rs48685405:175293513A/TCPLX2intron0.9850.999000.01130.92742b
rs578361005:175287545A/TCPLX2intron,near-gene-50.7270.994610.01240.66067
rs590927685:175235880T/CCPLX2intron0.7731.012170.01920.52777
rs592516015:175280287A/GCPLX2intron0.9811.030660.01730.080675
rs594879965:175265420A/GCPLX2intron0.9931.011470.01650.48757
rs596017055:175301110T/CCPLX2intron0.9591.002000.02870.94524
rs596485985:175300812T/CCPLX2intron0.9591.002000.02870.94545
rs599248545:175222615T/CCPLX2near-gene-50.9701.060350.03630.10657
rs601373385:175267777T/CCPLX2intron0.9901.016540.01630.31285
rs602701185:175257857A/GCPLX2intron0.9931.016230.01670.33563a
rs603402045:175296180A/GCPLX2intron0.9700.996710.02850.90884
rs611658455:175250482A/GCPLX2intron0.9831.016430.01660.3277
rs611784235:175270329A/CCPLX2intron0.8310.986990.01470.37083a
rs613730735:175300892A/GCPLX2intron0.9590.998600.02870.96035
rs623871065:175296249A/GCPLX2intron0.8530.971510.04120.48284
rs623871385:175299886T/CCPLX2intron0.9331.003310.01500.82812b
rs623871395:175306671T/CCPLX2intron0.9121.085890.04800.086495
rs623871415:175307969A/GCPLX2untranslated-30.9691.000000.02020.99995
rs64200865:175278688A/GCPLX2intron0.9410.953320.02250.033685
rs64200875:175278691A/GCPLX2intron0.9411.048960.02250.033615
rs64200885:175279492A/GCPLX2intron0.9551.045820.02240.045925
rs65562255:175259182A/GCPLX2intron1.0001.007230.01130.5287
rs65562265:175279241A/CCPLX2intron0.9440.954090.02250.036225
rs670729805:175255969A/CCPLX2intron0.9941.001300.01230.91815
rs671639515:175254406T/GCPLX2intron0.9451.002700.01640.86865
rs681536205:175263079A/CCPLX2intron0.9681.007430.01280.56167
rs68604205:175281132A/CCPLX2intron0.9821.010860.01070.31175
rs68606615:175281021C/GCPLX2intron0.9811.002600.01140.81554
rs68740255:175240816A/GCPLX2intron1.0101.024390.01140.034937
rs68852755:175242954C/GCPLX2intron0.9950.982550.01560.25735
rs68872415:175261076A/GCPLX2intron1.0101.009550.01080.37815
rs68873125:175268350A/TCPLX2intron0.9280.944970.02390.017585
rs68876205:175261021A/GCPLX2intron1.0000.991440.01150.45525
rs728231175:175236936A/GCPLX2intron0.9820.961080.01790.026864
rs728231185:175239417T/CCPLX2intron0.9840.961940.01780.029415
rs728231295:175260141A/GCPLX2intron0.8491.053060.03120.097776
rs728231495:175296514A/GCPLX2intron,near-gene-50.9641.012880.01100.24714
rs728231515:175302337T/CCPLX2intron0.8740.997100.02000.88415
rs728231535:175307299C/GCPLX2untranslated-30.8581.007430.01320.57412b
rs733263655:175230516A/GCPLX2intron0.9290.927650.04560.099587
rs738030645:175272512T/CCPLX2intron0.9191.029840.03160.3525
rs738030765:175289018A/GCPLX2intron0.9691.004310.02870.88064
rs738030795:175293743A/TCPLX2intron0.9730.994220.02840.83742b
rs738030805:175294538C/GCPLX2intron0.9711.003310.02850.90795
rs738030835:175304417T/CCPLX2intron0.9540.997000.02880.91675
rs747854915:175277899C/GCPLX2intron0.9241.062690.05590.27685
rs748202125:175287588A/GCPLX2intron,near-gene-50.6350.970930.01900.12086
rs751406525:175311305T/CCPLX2near-gene-30.9731.011060.02010.58412b
rs757227275:175229727T/CCPLX2intron0.9291.049280.02260.033036
rs759917425:175266082T/GCPLX2intron0.9670.998000.01630.90286
rs763671305:175244396T/CCPLX2intron0.8841.045400.05770.44116
rs767760905:175268670C/GCPLX2intron0.6020.928300.06730.26865
rs768466905:175311092A/GCPLX2near-gene-30.7931.042060.05890.48475
rs77106325:175234856C/GCPLX2intron0.9971.026030.01310.050287
rs77118435:175229648A/GCPLX2intron0.9991.023880.01080.029216
rs77144785:175248342T/CCPLX2intron0.9961.007020.01690.67837
rs772035995:175265199A/GCPLX2intron0.9960.988760.01650.49467
rs781907605:175277584T/CCPLX2intron0.9230.940160.05580.26954
rs789781075:175277698A/GCPLX2intron0.8810.969770.01990.12294
rs791667305:175229558T/GCPLX2intron0.6711.094500.04920.066575
rs792815615:175290438T/CCPLX2intron0.9740.995110.02860.8655
rs8718535:175282310T/GCPLX2intron0.9861.003000.01130.79045
rs8788505:175285931T/CCPLX2intron0.9460.990250.01130.38765
rs8794835:175280111A/GCPLX2intron0.9781.014300.01070.18295
rs8830195:175257213C/GCPLX2intron0.9851.006320.01850.73265
rs8831885:175251578T/GCPLX2intron0.9911.025830.01150.026625
rs8907345:175227308T/GCPLX2intron0.9971.025620.01310.053397
rs8907355:175227912A/GCPLX2intron0.9970.975020.01310.053622b
rs8907365:175231206T/CCPLX2intron1.0001.026650.01310.043825
rs8907375:175285898A/GCPLX2intron0.9801.004110.01100.7115
rs93137295:175262638A/GCPLX2intron0.9891.001700.01330.89627
rs9990655:175274468A/CCPLX2intron0.9940.990640.01070.3785
SNPPositionAlelleGeneAnnotationInfoOrSeP-valueeQTLScore*

  Note: RegulomeDB score*
score supporting data score supporting data
1aeQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak6other
2aTF binding + matched TF motif + matched DNase Footprint + DNase peak5TF binding or DNase peak
1beQTL + TF binding + any motif + DNase Footprint + DNase peak4TF binding + DNase peak
2bTF binding + any motif + DNase Footprint + DNase peak3bTF binding + matched TF motif
1ceQTL + TF binding + matched TF motif + DNase peak1feQTL + TF binding / DNase peak
2cTF binding + matched TF motif + DNase peak3aTF binding + any motif + DNase peak
1deQTL + TF binding + any motif + DNase peak1eeQTL + TF binding + matched TF motif
CNV Information

The gene is not affected by CNV!

eQTL Information