ZMAT2

Basic Information

Gene Symbol	ZMAT2
Entrez Id	153527
Position	chr5:140080032..140086239
Description	zinc finger, matrin-type 2
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs139197618	5:140086085	A/G	ZMAT2	untranslated-3	0.797	0.99035	0.0483	0.8409		-
rs17286731	5:140083744	A/G	ZMAT2	intron	0.999	1.04123	0.0122	0.0009404		1f
rs192351044	5:140086704	T/C	ZMAT2	near-gene-3	0.654	1.02860	0.0512	0.5817		-
rs2530232	5:140082878	A/G	ZMAT2	intron	0.993	0.95476	0.0106	0.00001248		6
rs2530233	5:140082876	A/G	ZMAT2	intron	1.000	0.95390	0.0105	7.542E-6		6
rs59127720	5:140082677	A/G	ZMAT2	intron	0.999	0.96041	0.0122	0.0009195		5
rs702395	5:140086677	T/C	ZMAT2	near-gene-3	0.978	1.04917	0.0107	7.044E-6		7
rs801166	5:140081902	A/G	ZMAT2	intron	1.000	1.02593	0.0129	0.04654		7
rs809635	5:140081791	A/G	ZMAT2	intron	1.000	0.95447	0.0105	9.854E-6		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information