VRK2

Basic Information

Gene Symbol	VRK2
Entrez Id	7444
Position	chr2:58273777..58387055
Description	vaccinia related kinase 2
Gene type	protein-coding

SNP Information

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SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10167028	2:58335756	C/G	VRK2	intron	1.000	1.07154	0.0184	0.0001742		5
rs10171955	2:58254078	A/G	VRK2	intron	0.989	0.95705	0.0138	0.001457		5
rs10172212	2:58379496	A/C	VRK2	intron	0.989	0.95447	0.0113	0.00003767		6
rs10172295	2:58201202	A/G	VRK2	intron	1.000	1.02778	0.0106	0.01002		7
rs10184957	2:58386247	T/G	VRK2	intron,near-gene-3	1.000	0.94592	0.0173	0.0013		5
rs10188070	2:58299326	A/G	VRK2	intron	0.989	0.94753	0.0112	1.406E-6		5
rs10188390	2:58271932	C/G	VRK2	intron,near-gene-5	0.991	1.02010	0.0184	0.2791		5
rs10188826	2:58153424	A/G	VRK2	intron	0.995	1.02214	0.0127	0.08454		6
rs10189138	2:58153676	T/G	VRK2	intron	0.925	1.07154	0.0164	0.00002431		6
rs10194044	2:58160171	T/C	VRK2	intron	1.000	0.89637	0.0259	0.00002476		7
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Showing 1 to 10 of 497 entries

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Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information