TSNAXIP1

Basic Information

Gene Symbol	TSNAXIP1
Entrez Id	55815
Position	chr16:67841010..67861971
Description	translin-associated factor X interacting protein 1
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs1109273	16:67856197	A/G	TSNAXIP1	intron	0.764	0.91879	0.0458	0.06419		6
rs113066419	16:67842470	A/C	TSNAXIP1	intron,near-gene-5	0.983	0.94526	0.0143	0.00007952		7
rs113493894	16:67844745	T/C	TSNAXIP1	intron	0.988	1.04019	0.0165	0.01711		7
rs117624237	16:67859257	A/C	TSNAXIP1	intron	0.732	1.00733	0.0287	0.7985		5
rs118108102	16:67844471	A/G	TSNAXIP1	intron	0.999	1.08448	0.0260	0.001845		6
rs11865098	16:67857436	A/G	TSNAXIP1	intron	0.998	0.92293	0.0250	0.001365		7
rs12325430	16:67853425	T/C	TSNAXIP1	intron	0.936	0.97326	0.0111	0.01437		7
rs138728054	16:67851985	A/G	TSNAXIP1	intron	0.847	1.00833	0.0434	0.8474		-
rs139290028	16:67853289	A/G	TSNAXIP1	intron	0.999	1.08459	0.0260	0.001825		-
rs143224015	16:67856236	A/T	TSNAXIP1	intron	0.910	1.03355	0.0534	0.5362		-
rs147433176	16:67841495	C/G	TSNAXIP1	intron,near-gene-5	0.951	0.92376	0.0458	0.08314		-
rs148094357	16:67851252	A/G	TSNAXIP1	intron	0.685	1.05454	0.0551	0.3353		-
rs149250342	16:67857854	A/G	TSNAXIP1	intron	0.848	1.11227	0.0476	0.02538		-
rs151116880	16:67853875	T/C	TSNAXIP1	intron	0.666	1.08872	0.0535	0.1125		-
rs2292316	16:67861134	C/G	TSNAXIP1	intron	1.000	0.95954	0.0163	0.01112		1f
rs28367503	16:67854534	A/G	TSNAXIP1	intron	1.010	0.92951	0.0243	0.002584		7
rs28465467	16:67843538	A/T	TSNAXIP1	intron	0.834	1.03842	0.0172	0.02794		6
rs28847731	16:67843310	T/C	TSNAXIP1	intron	0.998	1.08394	0.0250	0.001244		7
rs34693072	16:67861501	T/C	TSNAXIP1	intron	0.786	0.96831	0.0274	0.2401		5
rs35316276	16:67850700	T/C	TSNAXIP1	intron	0.909	0.99005	0.0125	0.4246		1f
rs59343240	16:67850529	C/G	TSNAXIP1	intron	1.010	0.92941	0.0243	0.002552		2b
rs62620177	16:67860637	T/C	TSNAXIP1	missense	0.999	1.08459	0.0260	0.001826		7
rs62636658	16:67855107	T/C	TSNAXIP1	coding-synon,intron,missense,untranslated-5	0.999	1.08459	0.0260	0.001823		4
rs71393968	16:67847341	A/G	TSNAXIP1	intron	0.784	1.03210	0.0274	0.249		7
rs7199443	16:67841129	T/G	TSNAXIP1	intron,near-gene-5,untranslated-5	0.999	0.94620	0.0141	0.00008799		4
rs8047631	16:67843046	T/G	TSNAXIP1	intron	1.000	1.08415	0.0250	0.001212		7
rs8051653	16:67848515	T/C	TSNAXIP1	intron	1.010	0.92941	0.0243	0.002537		2a
rs8059990	16:67853923	A/G	TSNAXIP1	intron	1.000	1.08101	0.0246	0.001522		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information