TRMT2A

Basic Information

Gene Symbol	TRMT2A
Entrez Id	27037
Position	chr22:20099398..20104768
Description	tRNA methyltransferase 2 homolog A (S. cerevisiae)
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs111617686	22:20101392	D/I3	TRMT2A	intron	0.952	0.93529	0.0252	0.007981		-
rs1633445	22:20100596	T/C	TRMT2A	intron	0.986	1.01725	0.0126	0.1757		4
rs73877139	22:20100911	T/C	TRMT2A	intron	1.000	0.91265	0.0290	0.001638		5
rs8142540	22:20101434	A/G	TRMT2A	intron	1.000	0.91421	0.0290	0.001967		2b
rs9606254	22:20100409	T/C	TRMT2A	intron	1.000	1.03087	0.0138	0.02759		2b
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information