TRANK1

Basic Information
Gene SymbolTRANK1
Entrez Id9881
Positionchr3:36868308..36986548
Descriptiontetratricopeptide repeat and ankyrin repeat containing 1
Gene typeprotein-coding
SNP Information

SNPPositionAlelleGeneAnnotationInfoOrSeP-valueeQTLScore*
rs102225253:36932601T/CTRANK1intron0.9890.961460.01240.0014687
rs11055733:36971517T/CTRANK1intron0.9590.988470.01790.51847
rs111297443:36966449A/GTRANK1intron0.9861.044460.01090.000063733a
rs1114400533:36904264C/GTRANK1intron0.8870.991730.02990.78137
rs1114500043:36876904T/CTRANK1intron0.8170.914750.05990.13697
rs1116874623:36903246C/GTRANK1intron0.9450.950280.02590.048797
rs1118740243:36965646A/TTRANK1intron0.8571.021830.03690.55896
rs1118997453:36969705A/GTRANK1intron0.9620.962810.02830.18166
rs1119904593:36976714T/CTRANK1intron0.9420.972390.03170.37836
rs1121328953:36972408T/CTRANK1intron0.8591.020810.03690.57736
rs1122130283:36885495A/CTRANK1intron0.6840.954470.05930.43184
rs1122252473:36890331T/GTRANK1intron0.8211.017960.03150.5727
rs1127825913:36954337A/GTRANK1intron0.8940.983140.03050.57664
rs1127893793:36923353T/CTRANK1intron0.8891.010150.02990.73627
rs1129283503:36951365A/GTRANK1intron0.7251.079180.05800.18875
rs1131154573:36900073T/CTRANK1intron0.8861.008840.02990.76947
rs1132639213:36983542T/CTRANK1intron0.7551.023470.05920.69485
rs1141752993:36986486A/GTRANK1near-gene-5,untranslated-50.8591.015210.02570.55572b
rs1146287853:36904791T/CTRANK1intron0.6941.100210.04790.046356
rs1149892813:36960925T/CTRANK1intron0.7641.014810.04290.73176
rs1160931133:36926205T/CTRANK1intron0.6771.002500.04750.95836
rs1167422813:36959609T/GTRANK1intron0.6440.897360.06500.095944
rs1167526203:36869421T/CTRANK1untranslated-30.6101.019690.07140.78437
rs117067803:36896235T/CTRANK1intron0.9861.073150.01134.539E-107
rs117081643:36943118T/CTRANK1intron0.9881.038630.01260.0025757
rs117107793:36965037A/GTRANK1intron0.7580.974820.01560.1014
rs119181903:36924629T/CTRANK1intron1.0001.040080.01220.0013346
rs119217473:36924636A/CTRANK1intron1.0001.039770.01220.0014137
rs119227073:36959370T/CTRANK1intron0.6770.939690.03290.058277
rs119267683:36968347T/CTRANK1intron0.9890.957720.01090.00006976
rs121070293:36923207T/CTRANK1intron1.0000.961750.01220.0014217
rs124881813:36913967A/TTRANK1intron0.9220.963390.01240.0027386
rs124972993:36888575T/CTRANK1intron1.0000.959930.01200.00068226
rs124976433:36974003A/GTRANK1intron0.9851.037380.01060.0005396
rs126298333:36920796T/CTRANK1intron0.9680.960120.01230.00099135
rs126377473:36904783A/GTRANK1intron1.0101.041120.01220.00092186
rs126379123:36871894A/CTRANK1intron0.9981.076380.01124.851E-117
rs130618053:36937983T/CTRANK1intron0.7610.968310.04410.46477
rs130623043:36908023A/GTRANK1intron0.9060.969860.01490.039735
rs130710643:36921527A/GTRANK1intron0.6330.997000.01330.81995
rs130808503:36958463A/CTRANK1intron0.9490.959930.01460.0052076
rs133144213:36962388A/GTRANK1intron0.9650.940160.01091.765E-85
rs1387392373:36907389T/CTRANK1intron0.9811.073470.01133.592E-10-
rs1397320873:36921312T/CTRANK1intron0.6111.023570.02660.3824-
rs1399131683:36920405A/GTRANK1intron0.7770.963100.03530.2877-
rs1408224443:36958301T/GTRANK1intron0.9011.026440.04640.5737-
rs1411556853:36932929T/CTRANK1intron0.7781.006920.06230.9125-
rs1421368043:36921542T/CTRANK1intron0.7590.982360.01520.241-
rs1421389223:36888576A/GTRANK1intron0.8191.026140.04600.5739-
rs1421560743:36878208A/TTRANK1intron0.7431.099220.05040.06069-
rs1422372823:36910168A/GTRANK1intron0.8001.084800.04130.04854-
rs1431101983:36951556T/CTRANK1intron0.8481.013690.04640.7689-
rs1431843003:36939682A/GTRANK1intron0.8600.924590.06210.2068-
rs1444214563:36957835A/TTRANK1intron0.8510.981470.05750.7445-
rs1450704983:36985866T/CTRANK1intron0.9520.984620.03010.6076-
rs1451578923:36951840A/GTRANK1intron0.8850.999400.04740.9901-
rs1474370623:36921062T/CTRANK1intron0.7191.012680.03650.73-
rs1482648833:36928430C/GTRANK1intron0.9400.934070.01164.043E-9-
rs170356723:36909902T/GTRANK1intron0.9971.040390.01230.0012416
rs170357483:36951572A/CTRANK1intron0.9590.979510.01360.12786
rs170357503:36952984T/GTRANK1intron0.9591.021020.01360.12466
rs170357553:36955409A/CTRANK1intron0.9150.998400.04100.96967
rs171950983:36893965T/CTRANK1intron0.9981.074660.01121.201E-106
rs172016033:36898973A/GTRANK1missense0.9191.022040.03020.47086
rs178077443:36894048T/CTRANK1intron0.9981.074550.01121.3E-107
rs1809789753:36921294T/CTRANK1intron0.7140.994810.01310.6905-
rs1812877323:36921205A/GTRANK1intron0.6440.964830.02130.09288-
rs1823470983:36921380T/CTRANK1intron0.6360.984230.01510.2921-
rs1830749933:36921366T/CTRANK1intron0.6551.017860.02660.5068-
rs1832289063:36935133A/CTRANK1intron0.6920.903210.07010.1464-
rs1832499073:36921326T/CTRANK1intron0.7051.012270.02220.5831-
rs1838947513:36915241T/CTRANK1intron0.8181.027270.04100.5117-
rs1839463693:36921506T/CTRANK1intron0.6431.012580.01550.4223-
rs1844690013:36921097A/GTRANK1intron0.7111.002300.04150.9562-
rs1845266733:36921398T/CTRANK1intron0.6081.022650.01810.2142-
rs1853052763:36921302A/TTRANK1intron0.6371.001600.02300.9453-
rs1853526083:36921437A/GTRANK1intron0.6521.022860.01710.187-
rs1854499073:36921560T/CTRANK1intron0.7380.983540.01410.2402-
rs1863949153:36921232T/CTRANK1intron0.6200.994610.02040.7905-
rs1866623273:36921488T/CTRANK1intron0.6011.012070.02210.5863-
rs1867298053:36921465A/GTRANK1intron0.6801.018880.02010.3525-
rs1867789003:36921337A/TTRANK1intron0.6821.017860.03570.6196-
rs1872521733:36921452T/CTRANK1intron0.6581.026440.01830.1528-
rs1873879193:36921573A/GTRANK1intron0.6140.939790.02180.004468-
rs1884091383:36921369A/GTRANK1intron0.6961.019490.03510.5814-
rs1900699913:36921401A/GTRANK1intron0.6120.975310.01390.07209-
rs1900780023:36921106T/CTRANK1intron0.6190.962420.02260.09069-
rs1911983443:36921308T/CTRANK1intron0.6320.955040.03520.1907-
rs1915825683:36921375A/GTRANK1intron0.6661.012170.02020.5471-
rs1917360343:36921344T/CTRANK1intron0.6001.014300.02140.5069-
rs1917949713:36921588T/CTRANK1intron0.7941.067910.02710.01535-
rs1919218923:36921455A/GTRANK1intron0.6350.998100.01670.9105-
rs1926902313:36926379A/GTRANK1intron0.6890.993320.06740.9203-
rs1930394193:36921411A/GTRANK1intron0.6301.009750.01950.6187-
rs1930944343:36921524T/CTRANK1intron0.7380.979410.01640.2048-
rs21748543:36870427C/GTRANK1intron0.9910.976870.01320.077067
rs285221463:36906822C/GTRANK1intron0.9870.966470.01080.0016356
rs285767243:36959899T/CTRANK1intron0.9970.938380.01084.242E-96
rs344961313:36921473A/GTRANK1intron0.6041.011360.01730.51235
rs345026433:36921509A/GTRANK1intron0.6301.002300.01330.86265
rs347073353:36934774A/CTRANK1intron0.9940.961080.01230.0012382b
rs348272953:36965123A/GTRANK1intron0.8771.011970.01560.44572a
rs351434373:36985315T/GTRANK1intron0.9161.040710.01880.034024
rs355951203:36921054T/CTRANK1intron0.9620.936220.01146.793E-96
rs356462833:36884011A/GTRANK1intron0.7660.995910.04300.92434
rs359294763:36921383A/GTRANK1intron0.6231.021830.01340.1065
rs359792233:36886306A/GTRANK1intron0.7670.957910.03620.23547
rs37961863:36876154T/CTRANK1intron0.9990.949140.01220.000018887
rs415117483:36898381A/GTRANK1coding-synon0.8641.001500.03170.96317
rs42342583:36878970A/GTRANK1intron0.9980.928490.01123.19E-115
rs42965483:36915814T/GTRANK1intron0.9700.965990.01090.0015387
rs43287573:36938180T/CTRANK1intron0.9781.031490.01090.0044247
rs43759953:36893000A/GTRANK1intron0.9941.026960.01410.060367
rs43923713:36883010A/CTRANK1intron0.9990.960020.01200.00069645
rs44237183:36937964A/GTRANK1intron0.9940.961370.01230.0013136
rs44252103:36938417A/GTRANK1intron0.9750.960980.01260.0015437
rs44252113:36951898A/GTRANK1intron0.9820.935940.01101.789E-97
rs44310503:36880684A/GTRANK1intron0.9941.063640.01860.00092935
rs44416093:36892717T/CTRANK1intron1.0000.967050.01080.0018897
rs44764633:36880858A/GTRANK1intron0.9971.042160.01210.000615
rs44979883:36920622T/GTRANK1intron0.9700.959540.01230.00082117
rs45087253:36937943T/CTRANK1intron0.9940.961270.01230.001317
rs45103383:36915524T/CTRANK1intron0.9601.040600.01240.0012896
rs45288893:36939094A/GTRANK1intron0.9831.016540.01330.21814
rs45351773:36977460A/GTRANK1intron0.9970.968600.01070.0029346
rs45476463:36881654A/TTRANK1intron0.9981.041230.01210.00079855
rs45835863:36925460T/CTRANK1intron1.0001.039770.01220.0014247
rs45914573:36916351A/GTRANK1intron0.9690.958870.01240.0006727
rs46023383:36932232A/CTRANK1intron0.9831.017450.01330.19457
rs46420703:36900944T/CTRANK1intron0.9881.036240.01080.0010027
rs46789093:36878563A/GTRANK1intron0.9970.928580.01123.592E-115
rs46789103:36887973C/GTRANK1intron0.9980.929880.01128.076E-117
rs46789113:36888064T/GTRANK1intron0.9981.075300.01128.437E-115
rs46789123:36894646A/TTRANK1intron0.9980.930530.01121.252E-106
rs46789133:36895741C/GTRANK1intron0.9940.929970.01129.793E-116
rs46789143:36948417T/GTRANK1intron0.9750.965700.01100.0015412b
rs46789153:36964583A/GTRANK1intron0.9221.063010.01125.643E-85
rs46789163:36965002A/CTRANK1intron0.6260.963290.03290.25635
rs46789173:36965158T/CTRANK1intron0.8970.969380.01830.088962b
rs47893:36869439T/CTRANK1untranslated-30.9960.949040.01067.171E-77
rs617323263:36898991T/CTRANK1missense0.6861.031790.05790.58897
rs622452533:36898036A/GTRANK1coding-synon0.9320.983240.02170.43567
rs622452553:36921491A/GTRANK1intron0.6061.003510.01350.79725
rs622452563:36921545A/GTRANK1intron0.6360.969090.01570.046085
rs622452583:36932602A/GTRANK1intron0.8670.998900.02490.96547
rs622468623:36963274A/CTRANK1intron0.9270.982260.01390.19886
rs622468633:36981102C/GTRANK1intron0.8910.991640.03630.81787
rs632660603:36894278A/CTRANK1intron0.9481.017860.01390.20236
rs65504373:36911079A/GTRANK1intron0.9870.963290.01220.0022255
rs65504383:36918614A/CTRANK1intron0.9700.960020.01230.00092696
rs65504393:36930875A/CTRANK1intron0.9991.039770.01220.0014325
rs65504403:36939286A/GTRANK1intron0.9930.961560.01230.0013927
rs65504413:36939606A/GTRANK1intron0.9930.960210.01230.00095416
rs65504423:36941924A/GTRANK1intron0.9940.962040.01260.0021366
rs67649683:36917368T/CTRANK1intron0.9700.960020.01230.00093677
rs67651393:36917406A/GTRANK1intron0.9700.960020.01230.00094296
rs67656243:36927546A/GTRANK1intron0.9980.961080.01220.0011817
rs67691893:36958773A/GTRANK1intron1.0000.974340.01500.082886
rs67695943:36920156T/CTRANK1intron0.9701.041850.01230.00089127
rs67716553:36884370A/CTRANK1intron0.9981.075950.01125.981E-115
rs67770943:36976926A/TTRANK1intron0.9941.036030.01060.0008426
rs67796653:36952932T/CTRANK1intron0.9910.952660.01075.458E-66
rs67812723:36974632A/TTRANK1intron0.9621.011870.01790.50952b
rs67941343:36927363T/CTRANK1intron1.0001.039670.01220.0014577
rs68061583:36966067T/CTRANK1intron0.9910.968410.01080.0030151f
rs681851073:36907090T/CTRANK1intron1.0000.961270.01230.0012677
rs713281593:36891844A/CTRANK1intron0.7671.005110.04300.90567
rs726199863:36918399A/GTRANK1intron0.9690.958580.01240.00062935
rs726199873:36954884C/GTRANK1intron0.9660.973950.01640.10595
rs726199883:36962739C/GTRANK1intron0.9371.023470.01660.16115
rs728612013:36928235T/CTRANK1intron1.0001.039770.01220.0014396
rs730680423:36918401A/GTRANK1intron0.8580.967540.02430.17525
rs730680443:36919481A/GTRANK1intron0.9841.072190.01135.836E-107
rs730680463:36920158T/CTRANK1intron0.9761.061410.01221.102E-67
rs730680543:36945794A/GTRANK1intron0.9661.068330.01112.686E-96
rs74289473:36926338A/CTRANK1intron0.9980.961850.01220.0014277
rs744246043:36931397T/CTRANK1missense0.8251.043210.03370.20997
rs751149483:36972383T/CTRANK1intron0.8590.979710.03690.57767
rs752698253:36982113A/GTRANK1intron0.9751.022650.02800.42256
rs755433973:36976537A/GTRANK1intron0.9671.042160.02850.14697
rs756837973:36972262A/GTRANK1intron0.9510.959350.02120.049796
rs761476833:36907105A/GTRANK1intron0.7130.982460.03430.60616
rs762266623:36884315T/CTRANK1intron0.9170.995010.02290.8265
rs763366283:36981357C/GTRANK1intron0.6651.013790.04340.75246
rs76456393:36939771T/CTRANK1intron0.9931.041440.01230.00094556
rs771952113:36890387T/GTRANK1intron0.9891.060240.01880.0018746
rs772663963:36957025T/CTRANK1intron0.9320.995310.03980.90636
rs773701843:36914650C/GTRANK1intron0.7110.989750.03530.77036
rs775286433:36882281A/CTRANK1intron0.9041.026650.03070.39235
rs778159683:36957689T/CTRANK1intron0.7971.036860.04750.44617
rs785003863:36923117T/CTRANK1intron0.7520.940160.03270.05946
rs788465873:36960704A/GTRANK1intron0.8700.978140.05100.66426
rs788936823:36957230C/GTRANK1intron0.9320.995310.03980.90647
rs790993993:36891939A/GTRANK1intron0.7521.011160.05450.83857
rs793559313:36931411A/GTRANK1coding-synon0.9540.949140.02590.04347
rs795055993:36899890A/GTRANK1intron0.8320.990840.03590.79677
rs795130273:36978709T/CTRANK1intron0.7231.062160.03000.044677
rs801850163:36941319T/CTRANK1intron0.9181.000500.04160.9916
rs93111393:36905623T/CTRANK1intron1.0001.039460.01220.0015297
rs96812223:36934354A/CTRANK1intron0.6100.929320.06490.25876
rs98101323:36920050A/GTRANK1intron0.9640.960790.01230.0011725
rs98119163:36878086A/GTRANK1intron0.9980.927840.01122.149E-116
rs98138693:36956349C/GTRANK1intron0.9630.941670.01115.799E-87
rs98181123:36956529A/GTRANK1intron0.7331.008440.03660.81866
rs98193043:36888172T/GTRANK1intron0.9980.929970.01128.506E-116
rs98193483:36951527T/CTRANK1intron0.9970.974820.01500.087916
rs98204613:36979951A/GTRANK1intron0.6031.009750.03670.79184
rs98212233:36883369T/CTRANK1intron0.9980.929140.01125.131E-117
rs98303223:36923392A/GTRANK1intron1.0000.961750.01220.0014237
rs98303793:36923615A/CTRANK1intron1.0000.961750.01220.0014236
rs98326463:36934534C/GTRANK1intron0.9940.961370.01230.0013044
rs98339283:36926372T/CTRANK1intron0.9751.042690.01220.00059247
rs98346863:36950971T/CTRANK1intron0.9071.000900.04090.98257
rs98495553:36968309T/CTRANK1intron0.9600.984820.01790.3936
rs98572523:36985232A/CTRANK1intron0.9981.031490.01070.0037924
rs98590933:36909472C/GTRANK1intron0.9951.038840.01220.0018245
rs98621883:36928318A/CTRANK1intron1.0001.039770.01220.0014427
rs98637983:36885960T/CTRANK1intron0.9941.075300.01121.08E-106
rs98649103:36940741T/GTRANK1coding-synon0.9940.961460.01260.0017887
rs98674553:36953424A/TTRANK1intron0.9900.952750.01075.808E-67
rs98814193:36913888A/GTRANK1intron0.9980.962330.01220.0016956
rs98828143:36924421A/GTRANK1intron0.9940.961850.01230.0016267
rs98829113:36885392T/CTRANK1intron0.9990.929510.01126.426E-114
rs98829243:36945591T/CTRANK1intron0.9540.965220.01100.0013586
rs98829523:36945650T/CTRANK1intron0.9931.039150.01260.0023237
rs98830013:36894579T/CTRANK1intron0.9981.074660.01121.25E-105
rs99852963:36889621T/CTRANK1intron1.0000.966570.01080.0016476
SNPPositionAlelleGeneAnnotationInfoOrSeP-valueeQTLScore*

  Note: RegulomeDB score*
score supporting data score supporting data
1aeQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak6other
2aTF binding + matched TF motif + matched DNase Footprint + DNase peak5TF binding or DNase peak
1beQTL + TF binding + any motif + DNase Footprint + DNase peak4TF binding + DNase peak
2bTF binding + any motif + DNase Footprint + DNase peak3bTF binding + matched TF motif
1ceQTL + TF binding + matched TF motif + DNase peak1feQTL + TF binding / DNase peak
2cTF binding + matched TF motif + DNase peak3aTF binding + any motif + DNase peak
1deQTL + TF binding + any motif + DNase peak1eeQTL + TF binding + matched TF motif
CNV Information

The gene is not affected by CNV!

eQTL Information