TP53

Basic Information

Gene Symbol	TP53
Entrez Id	7157
Position	chr17:7571720..7590863
Description	tumor protein p53
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs113451673	17:7581042	A/G	TP53	intron	0.667	1.19698	0.0618	0.003631		5
rs113530090	17:7578640	A/G	TP53	intron,untranslated-5	0.834	0.93165	0.0577	0.2194		6
rs12602273	17:7583013	C/G	TP53	intron	0.999	1.03531	0.0187	0.064		5
rs12603869	17:7582874	A/G	TP53	intron	0.993	1.03593	0.0187	0.05983		5
rs12944939	17:7580500	T/C	TP53	intron,near-gene-5	0.965	0.97006	0.0195	0.1202		7
rs12945970	17:7584032	A/G	TP53	intron	0.998	0.96667	0.0187	0.07049		7
rs12947788	17:7577427	A/G	TP53	intron	0.986	0.97853	0.0184	0.2376		3a
rs12949655	17:7575733	A/G	TP53	intron	0.960	1.02306	0.0190	0.231		6
rs12951053	17:7577407	A/C	TP53	intron	0.987	1.02265	0.0184	0.2227		2b
rs140699530	17:7580117	C/G	TP53	intron,near-gene-5	0.826	0.92969	0.0578	0.2075		-
rs1614984	17:7571452	A/G	TP53	near-gene-3	0.929	1.01319	0.0110	0.2348		5
rs1625895	17:7578115	T/C	TP53	intron	0.986	1.01187	0.0163	0.4689		5
rs1641548	17:7574779	T/C	TP53	intron	0.871	1.00321	0.0150	0.8333		7
rs1641549	17:7574775	T/C	TP53	intron	0.948	0.99283	0.0122	0.554		7
rs1642782	17:7581124	A/G	TP53	intron	0.977	1.03231	0.0194	0.1007		5
rs1642785	17:7579801	C/G	TP53	intron,near-gene-5,untranslated-5	0.959	1.00894	0.0121	0.4591		5
rs1642792	17:7576151	A/G	TP53	intron	0.762	0.98265	0.0538	0.7444		7
rs1642793	17:7575564	T/C	TP53	intron	0.923	1.01278	0.0167	0.4485		6
rs17879377	17:7574721	T/C	TP53	intron	0.935	1.00662	0.0251	0.7916		7
rs17880604	17:7577644	C/G	TP53	intron	0.655	1.03832	0.0545	0.491		5
rs17880847	17:7573897	A/T	TP53	intron	0.840	1.11516	0.0587	0.06359		6
rs17881850	17:7573057	A/G	TP53	intron	0.846	1.02655	0.0529	0.6202		5
rs17883323	17:7579619	T/G	TP53	intron,near-gene-5	0.952	0.99720	0.0227	0.903		5
rs17884306	17:7572101	T/C	TP53	untranslated-3	0.953	1.00240	0.0232	0.9187		6
rs17886107	17:7586063	T/C	TP53	intron	0.839	0.89691	0.0560	0.05185		5
rs1794284	17:7581271	T/C	TP53	intron	0.964	0.96435	0.0189	0.05463		6
rs1794287	17:7578837	A/G	TP53	intron,near-gene-5	0.972	1.00793	0.0171	0.6457		6
rs1800370	17:7579579	T/C	TP53	coding-synon,near-gene-5,untranslated-5	0.828	1.06386	0.0573	0.28		5
rs1800899	17:7576841	A/G	TP53	intron	0.808	0.92682	0.0587	0.1959		4
rs2078486	17:7583083	A/G	TP53	intron	1.000	0.96532	0.0187	0.05919		5
rs2909430	17:7578645	T/C	TP53	intron,untranslated-5	0.992	0.98926	0.0163	0.5069		6
rs35175270	17:7584515	A/G	TP53	intron	0.994	1.03469	0.0188	0.07008		7
rs35850753	17:7578671	T/C	TP53	intron,untranslated-5	0.894	1.04144	0.0394	0.3036		7
rs4968187	17:7572442	T/C	TP53	untranslated-3	0.603	1.01086	0.0611	0.86		5
rs60699444	17:7576276	A/T	TP53	intron	0.947	0.98295	0.0152	0.2558		6
rs6503048	17:7573229	T/C	TP53	intron	0.918	1.00060	0.0214	0.9766		6
rs75732100	17:7576348	T/C	TP53	intron	0.955	0.99601	0.0232	0.8631		7
rs77697176	17:7576501	A/G	TP53	intron	0.746	1.00995	0.0244	0.6853		7
rs78378222	17:7571752	T/G	TP53	untranslated-3	0.848	0.94469	0.0517	0.2714		5
rs8079544	17:7580052	T/C	TP53	intron,near-gene-5	0.976	0.99432	0.0229	0.8032		4
rs858528	17:7574936	T/C	TP53	intron	0.948	1.00622	0.0165	0.7073		7
rs9891744	17:7574864	T/C	TP53	intron	0.935	0.99461	0.0238	0.8209		7
rs9895829	17:7578679	A/G	TP53	intron,untranslated-5	0.973	1.00511	0.0229	0.8227		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information