Gene Symbol | TH |
---|---|
Entrez Id | 7054 |
Position | chr11:2185159..2193035 |
Description | tyrosine hydroxylase |
Gene type | protein-coding |
SNP | Position | Alelle | Gene | Annotation | Info | Or | Se | P-value | eQTL | Score* |
---|---|---|---|---|---|---|---|---|---|---|
rs117422675 | 11:2191462 | A/G | TH | intron | 0.673 | 1.06876 | 0.0676 | 0.325 | ![]() | 5 |
rs12419447 | 11:2187855 | C/G | TH | intron | 0.813 | 0.99035 | 0.0124 | 0.4342 | ![]() | 3a |
rs2070762 | 11:2186335 | A/G | TH | intron | 0.858 | 0.98620 | 0.0114 | 0.2246 | ![]() | 5 |
rs3842729 | 11:2184336 | A/G | TH | near-gene-5 | 0.844 | 1.00351 | 0.0142 | 0.8071 | ![]() | 5 |
rs4072824 | 11:2187439 | A/C | TH | intron | 0.824 | 1.00491 | 0.0126 | 0.7006 | ![]() | 4 |
rs4072826 | 11:2187482 | C/G | TH | intron | 0.824 | 0.99481 | 0.0126 | 0.6795 | ![]() | 2b |
rs4074905 | 11:2189185 | A/G | TH | intron | 0.817 | 0.99870 | 0.0127 | 0.9183 | ![]() | 5 |
rs4930043 | 11:2189983 | T/C | TH | intron | 0.823 | 0.99880 | 0.0128 | 0.9243 | ![]() | 5 |
rs67482701 | 11:2188436 | A/G | TH | intron | 0.820 | 1.00190 | 0.0127 | 0.8806 | ![]() | 5 |
rs77909323 | 11:2190355 | A/G | TH | intron | 0.672 | 1.09988 | 0.0355 | 0.007382 | ![]() | 4 |
SNP | Position | Alelle | Gene | Annotation | Info | Or | Se | P-value | eQTL | Score* |
score | supporting data | score | supporting data |
---|---|---|---|
1a | eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak | 6 | other |
2a | TF binding + matched TF motif + matched DNase Footprint + DNase peak | 5 | TF binding or DNase peak |
1b | eQTL + TF binding + any motif + DNase Footprint + DNase peak | 4 | TF binding + DNase peak |
2b | TF binding + any motif + DNase Footprint + DNase peak | 3b | TF binding + matched TF motif |
1c | eQTL + TF binding + matched TF motif + DNase peak | 1f | eQTL + TF binding / DNase peak |
2c | TF binding + matched TF motif + DNase peak | 3a | TF binding + any motif + DNase peak |
1d | eQTL + TF binding + any motif + DNase peak | 1e | eQTL + TF binding + matched TF motif |
The gene is not affected by CNV!