TAOK2

Basic Information

Gene Symbol	TAOK2
Entrez Id	9344
Position	chr16:29985222..30003581
Description	TAO kinase 2
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10445105	16:29999488	T/G	TAOK2	intron,untranslated-3	0.817	0.95945	0.0273	0.1295		5
rs10871451	16:29986205	C/G	TAOK2	intron	0.999	1.06823	0.0106	4.444E-10		2b
rs11860782	16:29989739	A/G	TAOK2	intron	0.962	0.94290	0.0219	0.007148		7
rs11864149	16:29999225	A/G	TAOK2	intron,missense	0.963	1.05908	0.0220	0.00896		5
rs3814881	16:30000901	A/G	TAOK2	intron	0.997	0.93594	0.0106	4.268E-10		1f
rs3814883	16:29994922	T/C	TAOK2	coding-synon	0.917	0.93305	0.0110	2.709E-10		1f
rs3814884	16:29994736	A/T	TAOK2	intron	0.998	0.93641	0.0106	5.585E-10		1f
rs4077410	16:29998200	A/G	TAOK2	coding-synon,intron	0.990	1.05348	0.0106	8.089E-7		5
rs4283241	16:29988349	A/G	TAOK2	intron	1.000	0.93604	0.0106	4.317E-10		6
rs4583255	16:29988941	A/G	TAOK2	intron	1.000	1.06791	0.0106	5.578E-10		6
rs4787488	16:29995803	A/C	TAOK2	intron	0.990	1.05285	0.0106	1.126E-6		1f
rs4787489	16:29995880	A/G	TAOK2	intron	0.998	0.93669	0.0106	6.775E-10		1f
rs4788204	16:29995218	A/G	TAOK2	intron	0.998	0.93660	0.0106	6.359E-10		1f
rs60683614	16:29999993	T/C	TAOK2	intron,near-gene-3	0.964	1.05993	0.0219	0.007839		5
rs62057680	16:29986627	T/C	TAOK2	intron	0.798	0.95858	0.0239	0.07657		4
rs62057682	16:29996399	T/C	TAOK2	intron	0.780	1.04196	0.0472	0.3843		5
rs9924686	16:30003076	A/G	TAOK2	untranslated-3	0.998	0.93641	0.0106	5.797E-10		1f
rs9925915	16:29993686	C/G	TAOK2	intron	0.998	0.93632	0.0106	5.121E-10		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

Reference	Study type	Sample size
19855392	Regional	4551 cases; 6391 controls
Reference	Study type	Sample size

eQTL Information