SYT11

Basic Information

Gene Symbol	SYT11
Entrez Id	23208
Position	chr1:155829260..155854990
Description	synaptotagmin XI
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs1094558	1:155847509	T/G	SYT11	intron	0.977	1.00672	0.0220	0.761		6
rs1094559	1:155847610	A/G	SYT11	intron	0.794	0.97922	0.0218	0.3349		7
rs111872775	1:155830864	T/G	SYT11	intron,near-gene-5	0.991	0.98079	0.0256	0.45		5
rs112293774	1:155831431	T/C	SYT11	intron	0.990	0.98157	0.0256	0.4662		7
rs112414573	1:155833518	T/C	SYT11	intron	0.961	0.98187	0.0254	0.471		7
rs114442346	1:155855207	T/C	SYT11	near-gene-3	0.772	0.98373	0.0447	0.713		7
rs114800548	1:155833407	T/C	SYT11	intron	0.852	0.94686	0.0375	0.1453		6
rs115295558	1:155832211	A/C	SYT11	intron	0.839	1.04802	0.0334	0.1609		6
rs17370982	1:155842928	T/C	SYT11	intron	0.956	0.99810	0.0296	0.9488		7
rs17379666	1:155852604	T/C	SYT11	untranslated-3	0.716	0.99273	0.0590	0.901		6
rs187018555	1:155844498	A/G	SYT11	intron	0.797	0.98236	0.0583	0.7598		-
rs190301488	1:155848644	T/C	SYT11	intron	0.828	1.03334	0.0340	0.3348		-
rs35374730	1:155855476	A/G	SYT11	near-gene-3	0.983	1.03355	0.0197	0.09417		7
rs3820594	1:155829511	T/C	SYT11	near-gene-5,untranslated-5	0.995	1.02768	0.0116	0.01901		1f
rs4971065	1:155832204	A/G	SYT11	intron	0.988	0.98098	0.0256	0.4543		7
rs4971106	1:155834259	C/G	SYT11	intron	0.984	1.02122	0.0256	0.412		5
rs71628695	1:155847427	T/C	SYT11	intron	0.975	0.99084	0.0262	0.7242		6
rs72706192	1:155833403	T/C	SYT11	intron	0.853	1.00985	0.0335	0.7689		7
rs76838616	1:155833005	A/G	SYT11	intron	0.986	1.01969	0.0256	0.4469		7
rs77345941	1:155842895	C/G	SYT11	intron	0.672	1.06577	0.0333	0.05605		7
rs78444759	1:155835774	A/C	SYT11	intron	0.645	0.97219	0.0275	0.3047		7
rs78735443	1:155832622	T/C	SYT11	intron	0.987	0.97893	0.0257	0.4073		7
rs822505	1:155846528	T/C	SYT11	intron	0.987	0.97590	0.0113	0.03167		7
rs822506	1:155846820	A/G	SYT11	intron	0.913	1.01227	0.0213	0.5671		7
rs822507	1:155849720	T/C	SYT11	intron	0.986	1.00030	0.0232	0.9904		7
rs822508	1:155850558	T/C	SYT11	intron	0.994	1.02593	0.0113	0.02378		6
rs822509	1:155850811	A/G	SYT11	intron	0.993	0.97453	0.0113	0.02262		4
rs822516	1:155842568	T/C	SYT11	intron	0.986	1.00110	0.0224	0.9602		7
rs822519	1:155840706	T/C	SYT11	intron	0.978	0.99860	0.0224	0.9506		6
rs822523	1:155837118	A/G	SYT11	intron	0.974	1.02061	0.0255	0.4251		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information