SUGP1

Basic Information

Gene Symbol	SUGP1
Entrez Id	57794
Position	chr19:19387322..19431307
Description	SURP and G patch domain containing 1
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs1010207	19:19416045	T/C	SUGP1	intron	0.991	0.94847	0.0111	1.993E-6		5
rs10401969	19:19407718	T/C	SUGP1	intron	0.994	0.99193	0.0192	0.6728		1f
rs10407952	19:19394396	T/C	SUGP1	intron	0.995	1.05317	0.0111	3.158E-6		7
rs10409234	19:19403410	A/G	SUGP1	intron	0.996	0.94810	0.0111	1.618E-6		7
rs10418051	19:19397789	T/C	SUGP1	intron	0.987	1.02922	0.0133	0.03042		6
rs10427072	19:19428927	T/C	SUGP1	intron,near-gene-5	0.785	0.94129	0.0148	0.00004306		6
rs112116399	19:19401245	A/G	SUGP1	intron	0.903	1.04425	0.0251	0.08425		6
rs112253053	19:19425145	A/T	SUGP1	intron	1.000	1.05485	0.0147	0.0002819		6
rs112860492	19:19394539	A/C	SUGP1	intron	0.903	0.96175	0.0423	0.357		6
rs113145184	19:19419984	T/C	SUGP1	intron	0.994	0.94885	0.0149	0.000427		6
rs113610638	19:19404578	T/G	SUGP1	intron	0.988	0.96185	0.0282	0.1672		5
rs114573949	19:19414379	A/C	SUGP1	intron	0.800	1.07337	0.0517	0.171		5
rs11555053	19:19390185	A/G	SUGP1	coding-synon	1.010	1.05527	0.0147	0.0002527		5
rs117109209	19:19417145	C/G	SUGP1	intron	0.639	1.09560	0.0410	0.02579		5
rs118064953	19:19404017	T/C	SUGP1	intron	0.787	0.91110	0.0249	0.0001817		7
rs12459676	19:19425141	A/T	SUGP1	intron	0.996	0.96522	0.0135	0.008963		6
rs12976025	19:19429220	T/C	SUGP1	intron,near-gene-5	0.995	1.03376	0.0136	0.01478		6
rs12979148	19:19406869	T/C	SUGP1	intron	0.989	0.97190	0.0152	0.06033		6
rs12981966	19:19388063	A/G	SUGP1	intron	0.985	1.03915	0.0274	0.1618		5
rs12981974	19:19388071	C/G	SUGP1	intron	0.916	1.03624	0.0145	0.01428		5
rs12983137	19:19419810	A/G	SUGP1	intron	0.998	1.03396	0.0135	0.01343		6
rs138295924	19:19394368	A/G	SUGP1	intron	0.841	1.01694	0.0263	0.5226		-
rs143017014	19:19394609	A/C	SUGP1	intron	0.748	0.99940	0.0545	0.9914		-
rs148310976	19:19406106	A/G	SUGP1	intron	0.748	0.99990	0.0545	0.9991		-
rs150612994	19:19392009	A/C	SUGP1	intron	0.633	0.93109	0.0540	0.1861		-
rs17683766	19:19388888	T/C	SUGP1	intron	0.986	0.96242	0.0275	0.1634		5
rs17750998	19:19388446	A/G	SUGP1	intron	0.794	0.91174	0.0223	0.00003505		5
rs17751021	19:19391045	A/G	SUGP1	coding-synon	0.986	1.03676	0.0273	0.1867		1f
rs17751061	19:19413092	T/C	SUGP1	missense	0.997	1.05570	0.0149	0.0002653		5
rs180868320	19:19420590	A/G	SUGP1	intron	0.904	1.10087	0.0505	0.05689		-
rs188195466	19:19423650	A/T	SUGP1	intron	0.753	1.04812	0.0315	0.1355		-
rs192626298	19:19422493	A/G	SUGP1	intron	0.692	1.02984	0.0487	0.5453		-
rs2023882	19:19405405	T/C	SUGP1	intron	0.997	0.94866	0.0111	2.038E-6		7
rs2023883	19:19405480	A/G	SUGP1	intron	0.995	1.03262	0.0135	0.01781		6
rs2074550	19:19387743	A/C	SUGP1	intron	0.995	0.94753	0.0111	1.273E-6		5
rs2074551	19:19388057	C/G	SUGP1	intron	0.914	1.05369	0.0120	0.00001368		5
rs2240117	19:19418916	T/C	SUGP1	intron	0.990	1.03097	0.0152	0.04385		7
rs2269873	19:19392401	T/C	SUGP1	intron	0.995	0.94961	0.0111	3.337E-6		5
rs2285859	19:19422485	A/G	SUGP1	intron	0.959	0.95094	0.0114	0.00001089		6
rs2301784	19:19390749	A/G	SUGP1	intron	0.997	1.05359	0.0111	2.59E-6		5
rs2301785	19:19408164	A/G	SUGP1	intron	0.989	1.05211	0.0223	0.0224		5
rs2301786	19:19413947	A/G	SUGP1	intron	0.996	0.94800	0.0111	1.528E-6		5
rs2315022	19:19413381	A/G	SUGP1	intron	0.996	0.94819	0.0111	1.653E-6		5
rs2315023	19:19413393	T/C	SUGP1	intron	1.000	1.05601	0.0147	0.0002207		5
rs2315024	19:19423817	A/T	SUGP1	intron	0.981	1.05327	0.0112	3.344E-6		6
rs2315025	19:19426609	T/C	SUGP1	intron	0.999	1.05527	0.0111	1.194E-6		7
rs35431065	19:19393677	A/G	SUGP1	intron	0.842	0.97541	0.0153	0.105		6
rs4808191	19:19388060	T/C	SUGP1	intron	0.962	1.05359	0.0114	4.99E-6		5
rs4808193	19:19410622	T/C	SUGP1	intron	0.979	0.94753	0.0113	1.647E-6		2b
rs4808937	19:19398005	A/G	SUGP1	intron	0.996	0.94857	0.0111	2.026E-6		6
rs4808938	19:19401218	A/G	SUGP1	intron	0.996	1.05422	0.0111	2.034E-6		6
rs4808939	19:19410480	T/C	SUGP1	intron	0.981	1.05264	0.0112	5.074E-6		5
rs4808940	19:19410948	C/G	SUGP1	intron	0.993	0.94724	0.0112	1.18E-6		7
rs4808941	19:19411136	T/C	SUGP1	intron	0.978	0.94857	0.0112	2.437E-6		7
rs4808942	19:19420581	T/C	SUGP1	intron	0.995	1.05485	0.0111	1.581E-6		7
rs4808943	19:19420840	C/G	SUGP1	intron	0.991	0.95037	0.0223	0.02212		5
rs4808944	19:19426613	A/C	SUGP1	intron	1.000	0.94800	0.0147	0.0002896		7
rs57962361	19:19425025	T/C	SUGP1	intron	0.989	1.02276	0.0161	0.1627		7
rs62135549	19:19390248	T/C	SUGP1	intron	0.689	0.94101	0.0276	0.02781		5
rs62135550	19:19396135	T/C	SUGP1	intron	0.637	0.91796	0.0482	0.07557		7
rs6511026	19:19391402	T/C	SUGP1	intron	0.998	1.05359	0.0111	2.598E-6		5
rs6511027	19:19391851	T/C	SUGP1	intron	1.010	1.05443	0.0145	0.0002552		1f
rs6511028	19:19395967	T/C	SUGP1	intron	0.995	0.94876	0.0111	2.194E-6		7
rs7254748	19:19397479	A/C	SUGP1	intron	0.996	0.94829	0.0111	1.759E-6		5
rs73001020	19:19418866	T/C	SUGP1	intron	0.796	0.96715	0.0334	0.3182		7
rs739846	19:19419071	A/G	SUGP1	intron	0.993	1.01197	0.0192	0.5355		7
rs74182632	19:19406126	A/G	SUGP1	intron	0.988	1.05338	0.0223	0.01951		7
rs74182633	19:19406707	A/C	SUGP1	intron	0.665	1.06855	0.0392	0.09028		7
rs74182634	19:19406924	A/T	SUGP1	intron	0.665	1.06865	0.0392	0.09002		6
rs74182635	19:19407270	A/G	SUGP1	intron	0.988	0.94923	0.0223	0.01942		7
rs76944848	19:19417512	T/C	SUGP1	intron	0.997	1.05496	0.0149	0.0003215		5
rs78640921	19:19384914	T/G	SUGP1	near-gene-5	0.727	0.92330	0.0528	0.1308		5
rs78844461	19:19422973	T/C	SUGP1	intron	0.783	1.00783	0.0304	0.7984		6
rs80146298	19:19426317	T/C	SUGP1	intron	0.998	1.05464	0.0149	0.0003399		4
rs80236111	19:19398740	A/G	SUGP1	intron	0.806	1.05327	0.0614	0.3975		7
rs8100097	19:19393683	A/G	SUGP1	intron	0.972	1.05919	0.0155	0.0002066		7
rs8100204	19:19393714	A/G	SUGP1	intron	0.839	1.02491	0.0172	0.1527		7
rs8100713	19:19393657	T/C	SUGP1	intron	0.877	0.94064	0.0175	0.0004803		7
rs8101938	19:19390497	A/G	SUGP1	intron	0.997	1.05359	0.0111	2.626E-6		5
rs8103496	19:19386015	A/G	SUGP1	near-gene-5	0.998	0.94923	0.0111	2.621E-6		5
rs8107974	19:19388500	A/T	SUGP1	intron	0.978	0.99471	0.0193	0.7837		5
rs8108647	19:19427623	A/G	SUGP1	intron,near-gene-5	1.000	0.96425	0.0135	0.006879		6
rs8113794	19:19393653	A/G	SUGP1	intron	0.872	0.94176	0.0177	0.0007033		7
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information