Gene Symbol | SRR |
---|---|
Entrez Id | 63826 |
Position | chr17:2207248..2228553 |
Description | serine racemase |
Gene type | protein-coding |
SNP | Position | Alelle | Gene | Annotation | Info | Or | Se | P-value | eQTL | Score* |
---|---|---|---|---|---|---|---|---|---|---|
rs111405344 | 17:2225366 | T/C | SRR | intron | 0.946 | 1.02562 | 0.0129 | 0.05064 | ![]() | 6 |
rs112308536 | 17:2223997 | A/G | SRR | intron | 0.950 | 0.98216 | 0.0118 | 0.1284 | ![]() | 5 |
rs113423156 | 17:2220780 | T/C | SRR | intron | 0.932 | 1.01867 | 0.0118 | 0.1163 | ![]() | 6 |
rs113967569 | 17:2213578 | A/G | SRR | intron | 0.748 | 0.94980 | 0.0457 | 0.26 | ![]() | 7 |
rs114350623 | 17:2215340 | C/G | SRR | intron | 0.896 | 1.03780 | 0.0489 | 0.4477 | ![]() | 7 |
rs12450028 | 17:2207425 | T/C | SRR | intron,near-gene-5 | 0.981 | 1.02276 | 0.0114 | 0.04864 | ![]() | 2b |
rs12947310 | 17:2207627 | C/G | SRR | intron,near-gene-5 | 0.623 | 0.99970 | 0.0146 | 0.9845 | ![]() | 4 |
rs138022112 | 17:2207947 | T/G | SRR | intron,near-gene-5 | 0.707 | 0.96996 | 0.0337 | 0.3654 | ![]() | - |
rs140030075 | 17:2212637 | A/G | SRR | intron | 0.809 | 0.94120 | 0.0491 | 0.2172 | ![]() | - |
rs144176654 | 17:2216155 | A/G | SRR | intron | 0.737 | 1.02450 | 0.0695 | 0.7282 | ![]() | - |
rs144257335 | 17:2221965 | T/C | SRR | intron | 0.860 | 0.97171 | 0.0264 | 0.2765 | ![]() | - |
rs144493227 | 17:2221531 | T/C | SRR | intron | 0.890 | 0.97687 | 0.0206 | 0.2552 | ![]() | - |
rs147006707 | 17:2214005 | T/C | SRR | intron | 0.845 | 1.00894 | 0.0297 | 0.7638 | ![]() | - |
rs148868451 | 17:2217518 | T/C | SRR | intron | 0.827 | 0.95409 | 0.0430 | 0.2743 | ![]() | - |
rs183873186 | 17:2218522 | A/G | SRR | intron | 0.770 | 0.98748 | 0.0304 | 0.6796 | ![]() | - |
rs192645311 | 17:2224045 | A/G | SRR | intron | 0.633 | 1.05538 | 0.0548 | 0.3254 | ![]() | - |
rs36113682 | 17:2214331 | T/C | SRR | intron | 0.945 | 1.06439 | 0.0113 | 3.049E-8 | ![]() | 7 |
rs364584 | 17:2211416 | A/C | SRR | intron | 0.949 | 1.06375 | 0.0113 | 4.139E-8 | ![]() | 7 |
rs391300 | 17:2216258 | T/C | SRR | intron | 0.962 | 0.94242 | 0.0112 | 1.193E-7 | ![]() | 5 |
rs393362 | 17:2211343 | A/T | SRR | intron | 0.930 | 0.94895 | 0.0118 | 9.384E-6 | ![]() | 6 |
rs4548913 | 17:2209888 | A/G | SRR | intron,untranslated-5 | 0.954 | 1.06567 | 0.0112 | 1.383E-8 | ![]() | 6 |
rs4606747 | 17:2209871 | T/C | SRR | intron,untranslated-5 | 0.955 | 1.06567 | 0.0112 | 1.428E-8 | ![]() | 7 |
rs4790326 | 17:2207666 | T/C | SRR | intron,near-gene-5 | 0.919 | 1.05496 | 0.0122 | 0.00001068 | ![]() | 5 |
rs505744 | 17:2211498 | A/C | SRR | intron | 0.940 | 1.06343 | 0.0113 | 4.984E-8 | ![]() | 6 |
rs510151 | 17:2211917 | A/C | SRR | intron | 0.943 | 1.06332 | 0.0113 | 5.563E-8 | ![]() | 6 |
rs77348207 | 17:2215685 | T/C | SRR | intron | 0.926 | 1.02778 | 0.0247 | 0.2666 | ![]() | 6 |
rs8081273 | 17:2222325 | T/C | SRR | intron | 0.959 | 1.02102 | 0.0111 | 0.06003 | ![]() | 6 |
rs9896781 | 17:2207610 | A/G | SRR | intron,near-gene-5 | 0.653 | 0.98728 | 0.0131 | 0.328 | ![]() | 4 |
rs9905025 | 17:2207631 | T/C | SRR | intron,near-gene-5 | 0.644 | 0.98975 | 0.0149 | 0.4892 | ![]() | 4 |
SNP | Position | Alelle | Gene | Annotation | Info | Or | Se | P-value | eQTL | Score* |
score | supporting data | score | supporting data |
---|---|---|---|
1a | eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak | 6 | other |
2a | TF binding + matched TF motif + matched DNase Footprint + DNase peak | 5 | TF binding or DNase peak |
1b | eQTL + TF binding + any motif + DNase Footprint + DNase peak | 4 | TF binding + DNase peak |
2b | TF binding + any motif + DNase Footprint + DNase peak | 3b | TF binding + matched TF motif |
1c | eQTL + TF binding + matched TF motif + DNase peak | 1f | eQTL + TF binding / DNase peak |
2c | TF binding + matched TF motif + DNase peak | 3a | TF binding + any motif + DNase peak |
1d | eQTL + TF binding + any motif + DNase peak | 1e | eQTL + TF binding + matched TF motif |
The gene is not affected by CNV!