SPECC1

Basic Information

Gene Symbol	SPECC1
Entrez Id	92521
Position	chr17:19990335..20218068
Description	sperm antigen with calponin homology and coiled-coil domains 1
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10083830	17:19965883	A/G	SPECC1	intron	1.000	1.03004	0.0111	0.007709		7
rs10083840	17:19965972	A/G	SPECC1	intron	1.000	0.96986	0.0111	0.005842		6
rs10083856	17:19966087	T/C	SPECC1	intron	1.010	0.95619	0.0107	0.00002732		7
rs1009082	17:20062959	A/G	SPECC1	intron	0.996	1.00924	0.0115	0.4244		5
rs1034904	17:19927699	T/C	SPECC1	intron	0.996	1.05106	0.0107	2.938E-6		6
rs10438824	17:20058510	T/C	SPECC1	intron,near-gene-5	1.000	1.00934	0.0114	0.4153		4
rs10459969	17:19935901	T/C	SPECC1	intron	0.983	0.93744	0.0132	1.05E-6		7
rs10459970	17:19937341	A/G	SPECC1	intron	1.000	1.04645	0.0158	0.004117		7
rs111469680	17:19919886	A/C	SPECC1	intron	0.999	1.04404	0.0159	0.006829		7
rs111487554	17:19965745	A/G	SPECC1	intron	0.991	1.07015	0.0199	0.0006437		5
rs111707756	17:19962273	A/C	SPECC1	intron	0.995	1.06897	0.0198	0.0007487		7
rs112115103	17:19937829	A/C	SPECC1	intron	0.950	1.07799	0.0205	0.000243		7
rs112441642	17:19936466	A/G	SPECC1	intron	0.993	1.04802	0.0160	0.003447		7
rs112659570	17:19965482	T/C	SPECC1	intron	1.010	1.04216	0.0155	0.007606		7
rs112817805	17:19923924	T/C	SPECC1	intron	1.000	1.04550	0.0159	0.004993		7
rs113185729	17:19993790	T/C	SPECC1	intron	0.617	1.04362	0.0405	0.2919		2b
rs113594202	17:20050603	T/C	SPECC1	intron	0.995	1.06141	0.0200	0.002898		7
rs114061449	17:19962500	A/G	SPECC1	intron	1.000	1.01147	0.0240	0.634		7
rs114444304	17:19960786	A/T	SPECC1	intron	0.997	1.02593	0.0251	0.3079		5
rs114505532	17:19965941	A/G	SPECC1	intron	1.000	0.98876	0.0240	0.6366		7
rs115018742	17:19960873	A/G	SPECC1	intron	1.000	0.98866	0.0240	0.634		5
rs115286928	17:19953473	A/G	SPECC1	intron	1.000	1.01147	0.0240	0.6361		7
rs115396458	17:19951443	A/G	SPECC1	intron	1.000	1.01126	0.0240	0.6398		7
rs115466182	17:20006477	A/G	SPECC1	intron	1.000	0.97677	0.0252	0.3508		7
rs116183097	17:19960859	T/C	SPECC1	intron	1.000	0.98857	0.0240	0.6309		5
rs116465767	17:20057726	A/G	SPECC1	intron,near-gene-5	1.000	0.97844	0.0252	0.386		4
rs116587843	17:20074327	A/T	SPECC1	intron	1.000	1.02194	0.0252	0.3881		5
rs116657407	17:19966442	T/C	SPECC1	intron	1.000	0.98876	0.0240	0.6376		6
rs116842670	17:20018329	A/G	SPECC1	intron	0.860	1.02583	0.0584	0.6621		7
rs116892101	17:19918843	A/T	SPECC1	intron	0.634	1.03272	0.0540	0.5507		6
rs116922675	17:20034539	C/G	SPECC1	intron	0.659	1.02984	0.0409	0.4723		6
rs116940086	17:20082456	C/G	SPECC1	intron	0.970	0.96754	0.0289	0.253		6
rs117036586	17:20085082	A/G	SPECC1	intron	0.603	0.98187	0.0629	0.7707		6
rs117240154	17:20068544	T/G	SPECC1	intron	0.648	1.02194	0.0236	0.3577		4
rs117297379	17:20002179	T/G	SPECC1	intron	0.600	0.99651	0.0708	0.9608		5
rs117380537	17:19916860	A/G	SPECC1	intron	0.659	0.97375	0.0234	0.2549		7
rs117433027	17:19929988	T/C	SPECC1	intron	0.658	1.03241	0.0498	0.5216		6
rs117539419	17:19925635	A/C	SPECC1	intron	0.757	0.93407	0.0382	0.07405		7
rs117898153	17:20003075	T/G	SPECC1	intron	0.617	1.02245	0.0449	0.6215		7
rs117903590	17:20054845	A/G	SPECC1	intron	0.968	0.96860	0.0288	0.267		7
rs118011634	17:20010800	T/C	SPECC1	intron	1.000	1.02153	0.0253	0.3999		7
rs118085302	17:20059583	T/G	SPECC1	intron	0.720	1.01035	0.0341	0.7625		2b
rs11867585	17:19992607	A/G	SPECC1	intron	1.010	0.95648	0.0107	0.00002982		7
rs11867646	17:19954118	C/G	SPECC1	intron	1.000	0.98886	0.0240	0.6398		7
rs11867652	17:19954184	C/G	SPECC1	intron	1.000	0.98866	0.0240	0.6361		7
rs11868084	17:19992717	A/G	SPECC1	intron	0.999	0.95782	0.0107	0.00005786		7
rs11868116	17:20029593	T/C	SPECC1	intron	1.000	0.96281	0.0108	0.0004723		6
rs11868146	17:20023035	A/G	SPECC1	intron	1.000	1.02235	0.0251	0.3794		7
rs11869616	17:19992713	A/G	SPECC1	intron	0.999	1.04404	0.0107	0.00005817		7
rs11869931	17:19975070	T/G	SPECC1	intron,near-gene-5	1.010	1.00662	0.0112	0.5557		7
rs11870111	17:19992738	A/G	SPECC1	intron	0.999	1.04404	0.0107	0.00005817		7
rs11870381	17:19957952	A/G	SPECC1	intron	1.000	0.98866	0.0240	0.6337		7
rs11870578	17:20076683	A/G	SPECC1	intron	1.000	0.97853	0.0252	0.3884		5
rs11870673	17:19954602	A/C	SPECC1	intron	0.996	1.01521	0.0240	0.5288		6
rs11871651	17:19997425	T/C	SPECC1	intron	1.010	0.95657	0.0107	0.00003243		6
rs12449914	17:20003969	T/C	SPECC1	intron	0.994	0.98866	0.0118	0.3324		6
rs12451216	17:20025840	A/C	SPECC1	intron	1.000	1.02850	0.0109	0.009605		5
rs12451841	17:20004875	A/G	SPECC1	intron	0.999	1.02542	0.0108	0.02024		7
rs12453332	17:19969297	A/C	SPECC1	intron	1.010	1.00642	0.0112	0.5665		6
rs12935996	17:20014556	T/C	SPECC1	intron	0.908	1.01521	0.0163	0.3554		7
rs12936401	17:19973853	A/G	SPECC1	intron	0.780	1.04645	0.0140	0.001154		6
rs12936443	17:20033446	T/G	SPECC1	intron	1.000	0.96300	0.0108	0.0005012		7
rs12936794	17:19912570	T/C	SPECC1	near-gene-5	0.960	1.00702	0.0122	0.5653		4
rs12937327	17:19978984	T/C	SPECC1	intron	1.010	1.01035	0.0118	0.3809		7
rs12937827	17:20033202	C/G	SPECC1	intron	1.000	1.02675	0.0110	0.01608		6
rs12941200	17:20011561	A/C	SPECC1	intron	0.983	1.00904	0.0116	0.4369		6
rs12942179	17:19999781	A/G	SPECC1	intron	1.000	1.02532	0.0108	0.02069		5
rs12943904	17:20007567	C/G	SPECC1	intron	0.992	1.01177	0.0118	0.3239		4
rs12946508	17:19952059	A/T	SPECC1	intron	0.988	0.99005	0.0118	0.3987		6
rs12947713	17:19974002	C/G	SPECC1	intron	1.010	1.00662	0.0112	0.556		7
rs12947950	17:20045176	T/C	SPECC1	intron	1.000	1.00975	0.0114	0.3984		2b
rs12947991	17:19931997	C/G	SPECC1	intron	0.824	0.94838	0.0125	0.00002363		4
rs12948178	17:20010325	T/C	SPECC1	intron	0.986	1.00904	0.0115	0.4371		5
rs12949242	17:20049863	T/C	SPECC1	intron	0.664	0.95190	0.0390	0.2057		7
rs12949485	17:20021661	A/G	SPECC1	intron	0.995	0.99064	0.0115	0.4097		6
rs12949710	17:19977838	A/T	SPECC1	intron	1.010	1.00652	0.0112	0.5593		5
rs12952398	17:20052116	T/C	SPECC1	intron	0.996	0.97336	0.0110	0.01426		7
rs13339684	17:19977211	A/G	SPECC1	intron	1.010	0.95839	0.0155	0.006056		5
rs138116530	17:19941772	C/G	SPECC1	intron	0.949	1.07724	0.0205	0.0002836		-
rs138148575	17:19973840	C/G	SPECC1	intron	0.744	1.03252	0.0534	0.5495		-
rs138381515	17:20004586	T/C	SPECC1	intron	1.000	0.97951	0.0253	0.4131		-
rs138426272	17:20065255	A/G	SPECC1	intron	1.000	0.97844	0.0252	0.3872		-
rs138667230	17:19912728	A/C	SPECC1	untranslated-5	0.841	0.91512	0.0218	0.00004773		-
rs139871381	17:20050563	T/C	SPECC1	intron	0.667	0.96348	0.0492	0.45		-
rs140659196	17:20048762	A/G	SPECC1	intron	0.864	1.05138	0.0378	0.1851		-
rs140888241	17:19953280	C/G	SPECC1	intron	1.000	0.98866	0.0240	0.6349		-
rs141965335	17:19951797	A/T	SPECC1	intron	0.649	0.96841	0.0463	0.4885		-
rs141993830	17:20037890	A/C	SPECC1	intron	0.619	1.08394	0.0504	0.1096		-
rs142294734	17:19925476	A/G	SPECC1	intron	0.950	1.06311	0.0540	0.2563		-
rs144429537	17:19962254	A/G	SPECC1	intron	1.000	1.01157	0.0240	0.6326		-
rs144655976	17:20070325	A/G	SPECC1	intron	0.789	0.97873	0.0373	0.5634		-
rs144796658	17:19919517	A/C	SPECC1	intron	0.744	0.95466	0.0443	0.2945		-
rs145445387	17:19965381	A/G	SPECC1	intron	0.972	0.98926	0.0244	0.6593		-
rs145930810	17:20083220	A/G	SPECC1	intron	0.608	0.99005	0.0648	0.8779		-
rs147391426	17:19951692	T/C	SPECC1	intron	1.000	0.98876	0.0240	0.6374		-
rs147638061	17:19962412	T/C	SPECC1	intron	0.804	0.96977	0.0449	0.4937		-
rs148662669	17:20075654	T/C	SPECC1	intron	0.616	1.02614	0.0731	0.7236		-
rs148744961	17:20000667	A/G	SPECC1	intron	0.809	1.00572	0.0566	0.9202		-
rs148820609	17:20043144	T/C	SPECC1	intron	0.985	1.06024	0.0199	0.003327		-
rs149315354	17:19912729	C/G	SPECC1	untranslated-5	0.763	1.09549	0.0221	0.00003797		-
rs149670444	17:19965238	T/G	SPECC1	intron	0.663	0.96069	0.0558	0.472		-
rs150343889	17:19951227	T/C	SPECC1	intron	0.746	1.06684	0.0512	0.2067		-
rs150383348	17:20068220	A/G	SPECC1	intron	0.803	1.04008	0.0440	0.3721		-
rs16942325	17:20027063	A/G	SPECC1	intron	0.998	0.96851	0.0158	0.04251		5
rs16960602	17:19924089	T/C	SPECC1	intron	0.987	0.92663	0.0556	0.1709		7
rs16960644	17:19953617	T/C	SPECC1	intron	1.000	0.97219	0.0136	0.03835		6
rs16960660	17:19965587	T/C	SPECC1	intron	1.010	0.95973	0.0155	0.007932		6
rs16960662	17:19967500	A/T	SPECC1	intron	0.997	1.06748	0.0198	0.0009502		4
rs16960672	17:19978028	A/G	SPECC1	intron	0.999	1.06791	0.0198	0.0008814		2b
rs16960678	17:19983691	T/G	SPECC1	intron	1.010	0.95868	0.0155	0.006511		6
rs16960697	17:20027718	A/G	SPECC1	intron	1.000	0.96281	0.0108	0.0004735		6
rs16960700	17:20029225	T/C	SPECC1	intron	1.000	1.01582	0.0137	0.2505		3a
rs16960715	17:20085185	T/G	SPECC1	intron	1.000	0.98423	0.0137	0.2475		7
rs16960717	17:20088289	C/G	SPECC1	intron	1.000	1.01643	0.0137	0.2361		1f
rs17685923	17:19974604	A/G	SPECC1	intron	1.010	0.99342	0.0112	0.5557		6
rs17686622	17:20020364	C/G	SPECC1	intron	0.995	0.99064	0.0115	0.4102		1f
rs17686798	17:20029170	T/G	SPECC1	intron	1.000	1.02870	0.0109	0.009213		1d
rs17686839	17:20039171	A/G	SPECC1	intron	1.000	0.97404	0.0110	0.01621		7
rs17759041	17:19959966	A/G	SPECC1	intron	1.000	0.98985	0.0118	0.3869		6
rs17759083	17:19963605	A/T	SPECC1	intron	1.000	1.03118	0.0111	0.005625		4
rs17759609	17:19992514	C/G	SPECC1	intron	1.000	1.01045	0.0118	0.3751		6
rs17759923	17:20022035	A/G	SPECC1	intron	0.997	1.02696	0.0110	0.01541		6
rs17759959	17:20024095	A/G	SPECC1	intron	1.000	0.97219	0.0109	0.009468		7
rs180722780	17:20007055	T/C	SPECC1	intron	0.807	1.00672	0.0566	0.905		-
rs181677986	17:19944948	T/G	SPECC1	intron	0.965	0.93951	0.0547	0.2543		-
rs189874732	17:19920028	C/G	SPECC1	intron	0.814	0.93735	0.0636	0.3091		-
rs1971043	17:20043515	A/G	SPECC1	intron	1.000	0.98462	0.0137	0.2575		6
rs1971044	17:20043473	A/T	SPECC1	intron	1.000	0.98383	0.0137	0.2344		6
rs1974745	17:20059824	C/G	SPECC1	intron	1.000	0.96368	0.0108	0.0006247		4
rs1985810	17:20065620	A/G	SPECC1	intron	0.998	1.02357	0.0110	0.03311		7
rs2042046	17:20018841	T/C	SPECC1	intron	1.000	0.96242	0.0108	0.0004085		6
rs2080673	17:20062395	A/C	SPECC1	intron	0.997	1.02655	0.0110	0.01727		6
rs2108979	17:19928566	A/G	SPECC1	intron	0.997	1.05127	0.0107	2.683E-6		4
rs2108980	17:19920518	A/G	SPECC1	intron	0.995	1.04938	0.0107	6.092E-6		5
rs2189709	17:20083226	A/T	SPECC1	intron	1.000	0.96425	0.0108	0.0007733		6
rs2189710	17:20078964	A/C	SPECC1	intron	1.000	0.97395	0.0110	0.0161		5
rs2385960	17:19938217	A/C	SPECC1	intron	1.000	1.04718	0.0158	0.003625		7
rs2526460	17:20086352	A/G	SPECC1	intron	1.000	0.97424	0.0110	0.01709		2b
rs2526462	17:20079460	A/T	SPECC1	intron	0.999	1.02706	0.0110	0.01468		6
rs2526463	17:20078297	A/G	SPECC1	intron	1.000	0.96416	0.0108	0.0007596		4
rs2526464	17:20075052	A/G	SPECC1	intron	1.000	1.02675	0.0110	0.01591		5
rs2703794	17:20073338	T/C	SPECC1	intron	1.000	0.97395	0.0110	0.0159		7
rs2703795	17:20077141	A/C	SPECC1	intron	1.000	0.96474	0.0108	0.0009292		5
rs2703797	17:20080301	T/C	SPECC1	intron	0.999	1.00955	0.0114	0.4075		5
rs2703799	17:20085768	T/G	SPECC1	intron	1.000	0.97414	0.0110	0.01685		6
rs2703800	17:20086562	A/G	SPECC1	intron	1.000	1.03614	0.0108	0.001028		6
rs28567541	17:19955102	T/C	SPECC1	intron	1.010	0.96012	0.0155	0.008561		6
rs28603224	17:19985052	A/G	SPECC1	intron	1.010	1.04582	0.0107	0.00002665		5
rs28622601	17:19958654	C/G	SPECC1	intron	1.010	1.04216	0.0155	0.007696		7
rs28637614	17:19985108	T/G	SPECC1	intron	1.010	1.04582	0.0107	0.00002666		7
rs28644386	17:19970566	T/C	SPECC1	intron	1.010	0.95849	0.0155	0.006172		7
rs28666381	17:19984809	C/G	SPECC1	intron	1.010	0.95619	0.0107	0.00002686		5
rs28713561	17:19931242	A/G	SPECC1	intron	0.934	0.94431	0.0537	0.2859		7
rs28807825	17:19942850	A/G	SPECC1	intron	0.994	1.05085	0.0107	3.311E-6		6
rs28830504	17:19945128	T/C	SPECC1	intron	0.966	1.06152	0.0545	0.2734		7
rs34089239	17:20057959	T/G	SPECC1	intron,near-gene-5	1.000	1.02644	0.0110	0.01714		4
rs34290687	17:19991211	A/G	SPECC1	intron	1.010	1.04571	0.0107	0.00002847		7
rs34291370	17:19942335	A/G	SPECC1	intron	0.993	1.05127	0.0108	3.327E-6		7
rs34370440	17:20003430	A/G	SPECC1	intron	1.000	0.97521	0.0108	0.0201		7
rs34401389	17:19989436	A/T	SPECC1	intron,near-gene-5	1.010	0.95667	0.0107	0.00003321		7
rs34644796	17:20064128	C/G	SPECC1	intron	1.000	0.97395	0.0110	0.01614		7
rs34712254	17:20049308	T/C	SPECC1	intron	1.000	1.02685	0.0110	0.01564		7
rs34756775	17:19982838	A/G	SPECC1	intron	1.010	0.99332	0.0112	0.5516		6
rs34848191	17:19918626	T/G	SPECC1	intron	0.950	1.04928	0.0110	0.00001248		6
rs35003563	17:19989218	A/G	SPECC1	intron,near-gene-5	1.010	1.04425	0.0106	0.00004832		7
rs35041742	17:20036253	T/C	SPECC1	intron	0.987	0.97142	0.0109	0.007926		7
rs35124809	17:19973338	T/C	SPECC1	intron	1.010	0.99342	0.0112	0.5565		6
rs35156798	17:19967935	A/G	SPECC1	intron	1.010	0.99342	0.0112	0.5529		3a
rs35191778	17:19967762	A/G	SPECC1	intron	1.010	1.00662	0.0112	0.5542		2a
rs35244101	17:19973453	A/G	SPECC1	intron	1.010	1.00662	0.0112	0.556		7
rs35254155	17:19923633	C/G	SPECC1	intron	0.985	0.99064	0.0118	0.4276		7
rs35493088	17:19974063	A/G	SPECC1	intron	1.010	1.00662	0.0112	0.556		6
rs35770292	17:19973539	A/T	SPECC1	intron	1.010	0.99342	0.0112	0.5542		7
rs35915823	17:19973397	A/G	SPECC1	intron	1.010	0.98965	0.0118	0.378		7
rs36051592	17:20035020	T/C	SPECC1	intron	1.000	0.97219	0.0109	0.009418		6
rs36077949	17:19985782	T/C	SPECC1	intron	1.010	1.04592	0.0107	0.00002575		7
rs36119009	17:20039853	A/G	SPECC1	intron	0.804	1.01786	0.0214	0.4086		6
rs3862151	17:19957289	A/G	SPECC1	intron	1.000	0.98985	0.0118	0.3845		7
rs3888318	17:19958049	T/C	SPECC1	intron	1.000	0.95399	0.0107	0.00001114		7
rs3909257	17:19947962	T/C	SPECC1	intron	0.965	0.95171	0.0541	0.3603		5
rs3909258	17:19945819	C/G	SPECC1	intron	0.996	0.95094	0.0107	2.325E-6		7
rs4267380	17:19971564	A/G	SPECC1	intron	1.000	0.95533	0.0107	0.00002		7
rs4341795	17:19977228	T/C	SPECC1	intron	1.010	1.00662	0.0112	0.5542		5
rs4346259	17:19977414	T/C	SPECC1	intron	1.010	1.00662	0.0112	0.5568		4
rs4350625	17:19980665	T/C	SPECC1	intron	1.010	1.00582	0.0112	0.6053		7
rs4471741	17:19971553	T/C	SPECC1	intron	1.000	0.99322	0.0112	0.5433		7
rs4479309	17:19971583	T/C	SPECC1	intron	1.000	1.04697	0.0107	0.00001815		7
rs4570919	17:20000815	T/C	SPECC1	intron	1.000	1.04488	0.0107	0.00004182		5
rs4577147	17:19944023	T/C	SPECC1	intron	0.985	0.99035	0.0119	0.4141		7
rs4588033	17:20029901	C/G	SPECC1	intron	1.000	0.97385	0.0110	0.0157		6
rs4924801	17:19921070	T/C	SPECC1	intron	0.996	0.95247	0.0107	4.855E-6		5
rs4924802	17:19955895	T/G	SPECC1	intron	1.000	1.01035	0.0118	0.381		6
rs4924803	17:19991806	T/C	SPECC1	intron	1.010	1.04561	0.0107	0.00002904		6
rs4924804	17:19991839	T/C	SPECC1	intron	0.948	1.04530	0.0109	0.00005149		7
rs4924805	17:19997205	C/G	SPECC1	intron	0.994	0.95495	0.0107	0.00001786		6
rs4924806	17:20002961	T/G	SPECC1	intron	0.997	1.04446	0.0107	0.00005059		7
rs4924808	17:20026548	A/G	SPECC1	intron	1.000	0.97307	0.0109	0.01209		6
rs4924809	17:20044673	T/C	SPECC1	intron	1.000	1.02696	0.0110	0.01542		5
rs4924810	17:20071819	T/C	SPECC1	intron	1.000	0.97385	0.0110	0.01564		6
rs4925065	17:19914546	T/C	SPECC1	intron	0.995	1.05064	0.0107	3.666E-6		4
rs4925066	17:19915292	A/G	SPECC1	intron	0.998	0.95151	0.0107	3.127E-6		7
rs4925067	17:19921222	C/G	SPECC1	intron	0.996	0.95247	0.0107	4.845E-6		7
rs4925069	17:19953531	C/G	SPECC1	intron	0.998	0.95495	0.0107	0.00001782		6
rs4925070	17:19954446	T/C	SPECC1	intron	0.619	0.94374	0.0142	0.00004872		6
rs4925071	17:19954499	T/C	SPECC1	intron	1.000	0.98975	0.0118	0.3823		6
rs4925072	17:19956899	A/G	SPECC1	intron	0.997	0.95533	0.0107	0.00002007		6
rs4925073	17:19962310	A/G	SPECC1	intron	0.973	0.95228	0.0108	6.35E-6		6
rs4925074	17:19962554	T/C	SPECC1	intron	1.000	1.01015	0.0118	0.3882		6
rs4925075	17:19969735	A/G	SPECC1	intron	1.010	1.00672	0.0112	0.5504		1b
rs4925076	17:19978292	T/C	SPECC1	intron	1.010	0.99352	0.0112	0.5603		7
rs4925077	17:19982276	A/G	SPECC1	intron	1.010	1.04603	0.0107	0.00002528		6
rs4925078	17:19982473	A/G	SPECC1	intron	1.010	1.00702	0.0112	0.5336		6
rs4925079	17:19986861	A/T	SPECC1	intron	1.010	1.04582	0.0107	0.00002669		5
rs4925080	17:19991838	A/T	SPECC1	intron	0.974	1.05064	0.0108	5.177E-6		7
rs4925081	17:19991993	A/G	SPECC1	intron	1.010	1.04436	0.0107	0.00004699		6
rs4925082	17:19994673	T/C	SPECC1	intron	1.010	0.97531	0.0108	0.02017		5
rs4925084	17:19998958	T/C	SPECC1	intron	0.980	1.00662	0.0114	0.563		3a
rs4925085	17:20000131	T/G	SPECC1	intron	0.997	1.04373	0.0107	0.00006689		6
rs4925086	17:20013459	A/T	SPECC1	intron	0.997	0.96175	0.0109	0.0003302		6
rs4925087	17:20024582	A/C	SPECC1	intron	1.000	0.96291	0.0108	0.0004865		6
rs4925088	17:20049344	A/G	SPECC1	intron	1.000	0.97746	0.0107	0.0331		6
rs4925089	17:20064784	A/T	SPECC1	intron	1.000	0.97404	0.0110	0.01648		6
rs4925090	17:20066631	T/C	SPECC1	intron	1.000	1.03666	0.0108	0.0008791		1f
rs4925091	17:20066988	T/C	SPECC1	intron	1.000	0.96454	0.0108	0.0008684		7
rs58313980	17:19940050	A/G	SPECC1	intron	1.000	0.95514	0.0158	0.003756		4
rs59790083	17:19918630	T/C	SPECC1	intron	0.943	1.07842	0.0207	0.0002609		6
rs61040459	17:19935728	T/G	SPECC1	intron	0.950	1.07799	0.0205	0.0002429		5
rs61141789	17:20028846	T/C	SPECC1	intron	1.000	1.01582	0.0137	0.2513		7
rs62066865	17:20050477	T/C	SPECC1	intron	0.999	0.96387	0.0108	0.000681		6
rs62066869	17:20059342	A/C	SPECC1	intron,untranslated-5	0.990	0.99312	0.0115	0.5516		4
rs62066870	17:20063758	A/C	SPECC1	intron	1.000	0.96454	0.0108	0.000851		5
rs62067482	17:19947275	A/G	SPECC1	intron	0.987	1.00975	0.0118	0.414		5
rs62067483	17:19948394	T/C	SPECC1	intron	0.986	1.00975	0.0119	0.4112		6
rs62067488	17:19967281	A/G	SPECC1	intron	1.010	1.00662	0.0112	0.5551		4
rs62067555	17:20001502	T/C	SPECC1	intron	1.000	0.95753	0.0107	0.00005219		7
rs62067558	17:20025706	T/G	SPECC1	intron	0.999	1.00975	0.0114	0.3957		5
rs6587208	17:19941079	T/C	SPECC1	intron	0.965	1.06141	0.0545	0.2738		7
rs6587211	17:19949548	A/G	SPECC1	intron	0.933	0.96464	0.0159	0.02312		7
rs6587212	17:19949601	A/G	SPECC1	intron	0.971	0.96348	0.0158	0.01849		6
rs6587215	17:19980779	T/G	SPECC1	intron	0.989	1.04415	0.0108	0.00006015		6
rs6587218	17:20032745	T/C	SPECC1	intron	1.000	1.01562	0.0137	0.2592		6
rs6587219	17:20034531	T/G	SPECC1	intron	1.000	0.96319	0.0108	0.0005293		7
rs7208365	17:19998017	T/G	SPECC1	intron	1.010	0.95686	0.0107	0.00003687		7
rs7209734	17:19988543	A/C	SPECC1	intron,near-gene-5	1.010	1.04980	0.0106	4.667E-6		5
rs7209752	17:19969397	A/G	SPECC1	intron	0.794	0.94516	0.0244	0.02093		7
rs7210439	17:19986041	T/C	SPECC1	intron	1.010	0.95820	0.0155	0.005841		6
rs7211535	17:19922364	A/G	SPECC1	intron	0.997	0.95218	0.0107	4.159E-6		6
rs7212500	17:20045658	A/G	SPECC1	intron	1.000	0.96377	0.0108	0.0006481		7
rs7215432	17:20012558	T/C	SPECC1	intron	0.986	1.02112	0.0141	0.1379		7
rs7216794	17:20011078	A/T	SPECC1	intron	0.995	0.96242	0.0109	0.0004279		6
rs7217862	17:19944943	T/G	SPECC1	intron	0.965	0.93951	0.0547	0.2543		6
rs7218708	17:19926836	A/G	SPECC1	intron	0.993	0.95161	0.0108	3.958E-6		5
rs7219908	17:20043036	A/G	SPECC1	intron	1.000	0.96377	0.0108	0.0006555		7
rs7222984	17:20019694	A/C	SPECC1	intron	0.998	0.96358	0.0109	0.0006263		7
rs7223305	17:19990986	A/G	SPECC1	intron	1.010	0.95552	0.0107	0.00002075		7
rs7225605	17:19986449	A/G	SPECC1	intron	1.010	0.95829	0.0155	0.00598		7
rs72830109	17:19966717	T/G	SPECC1	intron	0.998	1.07111	0.0196	0.0004711		6
rs72830114	17:19974319	T/C	SPECC1	intron	0.999	0.93548	0.0197	0.0006887		7
rs72830123	17:19989122	T/C	SPECC1	intron,near-gene-5	0.995	0.93772	0.0198	0.001164		5
rs72830128	17:19993053	A/G	SPECC1	intron	0.995	1.06577	0.0199	0.001375		5
rs72830139	17:20007247	T/C	SPECC1	intron	0.974	1.06535	0.0199	0.001479		4
rs72830140	17:20007500	A/G	SPECC1	intron	0.867	1.05401	0.0192	0.006043		4
rs72830141	17:20008450	A/G	SPECC1	intron	0.985	1.06152	0.0199	0.002753		7
rs72830145	17:20012496	A/G	SPECC1	intron	0.989	0.94082	0.0201	0.002391		6
rs72830150	17:20027426	A/C	SPECC1	intron	0.983	1.06205	0.0198	0.002316		7
rs72830153	17:20037345	A/G	SPECC1	intron	0.996	0.94205	0.0200	0.002831		6
rs72830165	17:20058819	C/G	SPECC1	intron,near-gene-5	0.996	0.94214	0.0200	0.002906		2b
rs72830176	17:20080366	A/G	SPECC1	intron	0.995	0.94195	0.0200	0.002826		5
rs72830177	17:20083115	T/C	SPECC1	intron	0.987	0.94242	0.0200	0.002985		7
rs72830178	17:20084189	T/C	SPECC1	intron	0.995	0.94195	0.0200	0.002801		7
rs72841993	17:19917974	T/C	SPECC1	intron	0.710	1.14248	0.0548	0.015		7
rs72841998	17:19935542	A/G	SPECC1	intron	0.647	0.98491	0.0282	0.5895		7
rs72841999	17:19937152	T/C	SPECC1	intron	0.949	1.07745	0.0205	0.0002746		5
rs72843505	17:19945303	A/T	SPECC1	intron	0.949	1.07745	0.0205	0.000275		7
rs72843506	17:19946287	A/T	SPECC1	intron	0.983	1.06673	0.0132	1.05E-6		6
rs73299658	17:20027414	A/G	SPECC1	intron	1.000	0.98482	0.0137	0.2633		7
rs73301548	17:20071381	A/G	SPECC1	intron	1.000	0.98413	0.0137	0.2419		7
rs73981803	17:19992265	T/C	SPECC1	intron	1.010	1.04321	0.0155	0.006395		7
rs73981807	17:19996230	C/G	SPECC1	intron	1.000	0.95858	0.0155	0.006563		5
rs73984559	17:19946516	A/C	SPECC1	intron	1.000	1.04697	0.0158	0.003751		5
rs73984564	17:19971848	A/G	SPECC1	intron	1.010	1.04331	0.0155	0.006097		7
rs73984568	17:19977614	T/G	SPECC1	intron	1.010	1.04331	0.0155	0.006117		5
rs73984571	17:19984059	T/C	SPECC1	intron	1.010	1.04321	0.0155	0.006357		7
rs73984573	17:19985340	A/G	SPECC1	intron	1.010	0.95829	0.0155	0.005957		7
rs74203832	17:20065619	T/C	SPECC1	intron	1.000	1.01532	0.0137	0.2681		7
rs74333705	17:20000761	C/G	SPECC1	intron	0.998	1.04185	0.0156	0.008857		5
rs74350104	17:19963235	T/G	SPECC1	intron	1.000	0.98866	0.0240	0.6352		4
rs74503262	17:19959377	A/G	SPECC1	intron	1.000	0.98866	0.0240	0.6336		6
rs74648067	17:19926251	T/C	SPECC1	intron	1.000	1.04634	0.0159	0.004309		5
rs74737710	17:19954364	T/G	SPECC1	intron	1.000	1.01147	0.0240	0.6362		6
rs74852506	17:19957226	A/G	SPECC1	intron	1.000	0.98876	0.0240	0.6365		7
rs74978760	17:20036545	T/C	SPECC1	intron	1.000	1.02061	0.0250	0.4149		6
rs7503407	17:19980772	T/G	SPECC1	intron	1.010	0.99322	0.0112	0.5453		6
rs75048432	17:19960884	A/G	SPECC1	intron	1.010	1.04216	0.0155	0.007601		5
rs75383084	17:19996953	T/C	SPECC1	intron	1.000	0.97668	0.0251	0.3483		5
rs75660459	17:19922782	T/C	SPECC1	intron	0.951	1.07939	0.0205	0.00019		7
rs75715653	17:19950823	A/G	SPECC1	intron	1.000	0.98886	0.0240	0.6416		7
rs75919005	17:19999100	T/G	SPECC1	intron	1.000	1.02378	0.0251	0.3506		4
rs76012736	17:19914226	T/C	SPECC1	intron	0.659	1.02706	0.0234	0.2536		5
rs76107663	17:19969115	A/G	SPECC1	intron	1.000	1.02429	0.0251	0.3386		7
rs76163047	17:19980108	A/G	SPECC1	intron	1.000	0.97795	0.0252	0.3772		6
rs76447366	17:19962724	T/C	SPECC1	intron	1.000	0.98866	0.0240	0.6348		5
rs76598003	17:19969272	C/G	SPECC1	intron	1.000	0.97844	0.0252	0.3885		6
rs76668282	17:20078221	C/G	SPECC1	intron	0.648	1.02194	0.0236	0.3591		2b
rs76721564	17:19962866	T/C	SPECC1	intron	1.000	1.02429	0.0251	0.34		5
rs76801772	17:20074280	A/C	SPECC1	intron	1.000	0.97853	0.0252	0.3882		5
rs76965466	17:19927048	T/C	SPECC1	intron	0.965	1.06152	0.0545	0.273		6
rs77090106	17:19948145	A/G	SPECC1	intron	0.999	1.04645	0.0158	0.004194		7
rs77428302	17:19964676	T/C	SPECC1	intron	1.000	1.01136	0.0240	0.6363		7
rs77476893	17:20020240	A/G	SPECC1	intron	0.671	1.08709	0.0767	0.2764		4
rs77540008	17:19973199	A/G	SPECC1	intron	1.010	1.04289	0.0155	0.00667		6
rs77794611	17:20071560	A/C	SPECC1	intron	0.648	0.97853	0.0236	0.3586		7
rs78033472	17:19942531	T/C	SPECC1	intron	0.966	0.94214	0.0545	0.2736		6
rs78083683	17:19956179	A/G	SPECC1	intron	1.000	0.98866	0.0240	0.6334		7
rs78140542	17:19945374	T/G	SPECC1	intron	0.966	0.94214	0.0545	0.2738		7
rs78174961	17:19964061	A/T	SPECC1	intron	1.000	1.01147	0.0240	0.6356		7
rs78179050	17:19958558	A/T	SPECC1	intron	1.000	0.97629	0.0251	0.3396		7
rs78286454	17:19968638	A/G	SPECC1	intron	0.806	0.96686	0.0449	0.4531		7
rs78293090	17:19954383	T/C	SPECC1	intron	0.756	0.99730	0.0229	0.9063		6
rs78325601	17:19921799	A/G	SPECC1	intron	1.000	1.04540	0.0159	0.005097		6
rs78408002	17:19985914	A/G	SPECC1	intron	1.010	0.95820	0.0155	0.005852		7
rs78532287	17:19912679	A/G	SPECC1	near-gene-5,untranslated-5	0.927	0.95734	0.0155	0.004862		4
rs78915802	17:20056765	A/G	SPECC1	intron	1.000	0.98079	0.0251	0.4388		4
rs79148356	17:19956856	A/G	SPECC1	intron	0.717	1.01147	0.0673	0.866		6
rs79204686	17:20024098	C/G	SPECC1	intron	0.863	1.02296	0.0593	0.7022		5
rs79406817	17:19915127	T/C	SPECC1	intron	0.998	1.04571	0.0159	0.00489		7
rs79639330	17:19957690	T/C	SPECC1	intron	1.000	0.97873	0.0252	0.394		5
rs79947248	17:19963247	A/G	SPECC1	intron	1.000	0.97629	0.0251	0.3401		4
rs79979359	17:19991873	A/G	SPECC1	intron	1.000	0.97638	0.0251	0.3412		7
rs80002181	17:20037876	A/G	SPECC1	intron	0.971	1.03427	0.0287	0.2406		7
rs80131144	17:19966467	A/G	SPECC1	intron	1.000	0.97629	0.0251	0.3402		6
rs80237270	17:19937349	A/T	SPECC1	intron	0.965	1.06141	0.0545	0.2738		6
rs80250684	17:19958296	T/C	SPECC1	intron	1.010	1.04216	0.0155	0.007595		6
rs8065337	17:19941879	A/C	SPECC1	intron	0.979	1.05317	0.0108	1.463E-6		7
rs8066143	17:20048355	A/C	SPECC1	intron	1.000	0.96377	0.0108	0.0006639		6
rs8066705	17:19966847	T/C	SPECC1	intron	1.000	0.98876	0.0240	0.6391		5
rs8067545	17:19912710	T/C	SPECC1	untranslated-5	0.962	0.94857	0.0108	1.088E-6		4
rs8068484	17:19976394	T/C	SPECC1	intron,near-gene-5	1.010	1.00652	0.0112	0.5631		3a
rs8071730	17:19932731	T/C	SPECC1	intron	0.993	1.05148	0.0107	2.548E-6		6
rs8073875	17:19939059	A/G	SPECC1	intron	1.000	0.95514	0.0158	0.003755		6
rs8074791	17:19966694	T/C	SPECC1	intron	1.000	1.01136	0.0240	0.6382		6
rs8075343	17:19975487	T/C	SPECC1	intron,near-gene-5	1.010	0.99342	0.0112	0.556		5
rs8077051	17:20029933	A/G	SPECC1	intron	1.000	1.01582	0.0137	0.2502		7
rs8078716	17:20044291	A/G	SPECC1	intron	1.000	1.03759	0.0108	0.0006544		6
rs8080190	17:19916593	C/G	SPECC1	intron	0.916	1.05781	0.0531	0.2895		5
rs8080649	17:20069677	C/G	SPECC1	intron	1.000	1.03666	0.0108	0.0008794		6
rs8081817	17:19975466	T/C	SPECC1	intron,near-gene-5	1.010	1.00662	0.0112	0.5552		5
rs8082671	17:19941008	T/G	SPECC1	intron	0.964	1.06131	0.0545	0.2752		6
rs888423	17:19999409	A/G	SPECC1	intron	0.989	1.04425	0.0108	0.00005808		5
rs888424	17:19985427	A/G	SPECC1	intron	1.010	1.02573	0.0108	0.01832		7
rs918227	17:20002164	A/G	SPECC1	intron	0.959	0.95849	0.0111	0.0001246		5
rs918228	17:20002012	T/C	SPECC1	intron	1.000	1.04425	0.0107	0.0000526		5
rs972966	17:20030992	C/G	SPECC1	intron	1.000	1.02819	0.0109	0.01045		6
rs9889684	17:20003971	A/T	SPECC1	intron	0.967	0.95945	0.0162	0.0105		6
rs9889743	17:19965423	A/G	SPECC1	intron	1.010	0.95590	0.0107	0.00002403		7
rs9891008	17:19941903	T/C	SPECC1	intron	0.964	1.06003	0.0545	0.2848		7
rs9891739	17:19942177	T/C	SPECC1	intron	0.996	1.05138	0.0107	2.615E-6		6
rs9892175	17:19942337	A/C	SPECC1	intron	0.966	1.06152	0.0545	0.2734		7
rs9893185	17:19939229	T/C	SPECC1	intron	0.965	1.06141	0.0545	0.2737		6
rs9893832	17:20038273	A/G	SPECC1	intron	1.000	0.96377	0.0108	0.0006647		6
rs9896010	17:19930850	A/T	SPECC1	intron	0.860	0.95858	0.0519	0.4152		7
rs9896387	17:19938278	A/G	SPECC1	intron	0.965	0.94214	0.0545	0.2741		6
rs9896411	17:19987610	A/T	SPECC1	intron	1.010	0.95609	0.0107	0.00002625		6
rs9897161	17:20034270	T/C	SPECC1	intron	1.010	0.97142	0.0155	0.06117		6
rs9897168	17:20034274	T/G	SPECC1	intron	1.010	0.97142	0.0155	0.06118		6
rs9897246	17:19965702	T/G	SPECC1	intron	1.010	0.95581	0.0107	0.00002351		1f
rs9897607	17:19944177	T/C	SPECC1	intron	0.900	0.97229	0.0510	0.582		6
rs9897653	17:19987924	A/G	SPECC1	intron	1.010	1.04592	0.0107	0.00002619		7
rs9898080	17:20035257	A/G	SPECC1	intron	1.000	0.96310	0.0108	0.0005163		6
rs9900393	17:19932732	C/G	SPECC1	intron	0.964	0.94195	0.0545	0.2729		6
rs9900441	17:19932779	C/G	SPECC1	intron	0.965	0.94214	0.0545	0.2739		6
rs9901125	17:20008929	A/G	SPECC1	intron	1.000	0.97472	0.0108	0.01804		3a
rs9901336	17:20064190	A/G	SPECC1	intron	1.000	1.03676	0.0108	0.0008606		6
rs9901357	17:20009042	A/C	SPECC1	intron	0.998	0.96021	0.0157	0.009675		4
rs9901796	17:20064353	A/G	SPECC1	intron	0.998	1.03749	0.0108	0.0006911		7
rs9901862	17:19933398	T/C	SPECC1	intron	0.965	1.06152	0.0545	0.2735		7
rs9907516	17:20070490	A/G	SPECC1	intron	0.992	1.03593	0.0109	0.001197		7
rs9907788	17:20008903	T/C	SPECC1	intron	0.997	0.95743	0.0107	0.00005132		3a
rs9909012	17:19941948	T/C	SPECC1	intron	0.939	0.92182	0.0553	0.1412		7
rs9909242	17:19942024	T/C	SPECC1	intron	0.965	0.94214	0.0545	0.2739		6
rs9909544	17:19940203	T/G	SPECC1	intron	0.965	1.06141	0.0545	0.2737		6
rs9911605	17:20017091	T/C	SPECC1	intron	1.000	1.01765	0.0137	0.2024		7
rs9911879	17:19990142	A/T	SPECC1	intron,near-gene-5	1.010	1.04279	0.0155	0.006823		5
rs9912371	17:20021030	A/G	SPECC1	intron	0.846	0.97844	0.0117	0.06333		6
rs9912657	17:19926752	T/C	SPECC1	intron	0.965	0.94205	0.0545	0.2731		5
rs9912775	17:19987480	T/C	SPECC1	intron	1.010	1.04697	0.0107	0.00001726		6
rs9913018	17:20064072	T/C	SPECC1	intron	1.010	0.97142	0.0155	0.06154		6
rs9914328	17:19947289	A/C	SPECC1	intron	0.964	0.94242	0.0541	0.2735		5
rs9914429	17:19940074	A/G	SPECC1	intron	0.965	0.94214	0.0545	0.2739		3a
rs9915758	17:19964775	A/G	SPECC1	intron	1.010	0.95590	0.0107	0.00002403		6
rs9916729	17:19964580	A/T	SPECC1	intron	1.010	1.04216	0.0155	0.007616		7
rs9941362	17:20085311	C/G	SPECC1	intron	1.000	0.98432	0.0137	0.2478		6
rs9941376	17:20085300	A/T	SPECC1	intron	1.000	0.98432	0.0137	0.2477		6
rs9944451	17:20001316	T/C	SPECC1	intron	1.000	0.95753	0.0107	0.00005179		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information