SNX19

Basic Information

Gene Symbol	SNX19
Entrez Id	399979
Position	chr11:130745766..130786382
Description	sorting nexin 19
Gene type	protein-coding

SNP Information

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SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs1050071	11:130747231	C/G	SNX19	untranslated-3	1.000	1.05707	0.0106	1.469E-7		6
rs1050078	11:130746146	T/C	SNX19	untranslated-3	0.995	1.05348	0.0107	1.129E-6		5
rs1050081	11:130784647	C/G	SNX19	intron,ncRNA,missense	0.996	1.07648	0.0131	1.734E-8		7
rs10732869	11:130762550	T/C	SNX19	intron	0.995	0.99671	0.0110	0.7669		7
rs10732870	11:130762569	A/G	SNX19	intron	0.995	0.99671	0.0110	0.7672		6
rs10736588	11:130762505	C/G	SNX19	intron	0.996	1.00351	0.0110	0.7528		7
rs10736589	11:130762529	A/G	SNX19	intron	0.996	1.00361	0.0110	0.7435		7
rs10736590	11:130763152	C/G	SNX19	intron	0.996	0.99671	0.0110	0.7624		6
rs10736591	11:130766532	T/C	SNX19	intron	1.000	1.00924	0.0111	0.4087		7
rs10750451	11:130761615	A/T	SNX19	intron	0.996	1.00351	0.0110	0.752		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Showing 1 to 10 of 171 entries

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Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

Reference	Study type	Sample size
22196331	GWAS	177 cases; 436 controls
Reference	Study type	Sample size

eQTL Information