SLC6A4

Basic Information
Gene SymbolSLC6A4
Entrez Id6532
Positionchr17:28523376..28562954
Descriptionsolute carrier family 6 (neurotransmitter transporter), member 4
Gene typeprotein-coding
SNP Information

SNPPositionAlelleGeneAnnotationInfoOrSeP-valueeQTLScore*
rs1108012117:28528842T/CSLC6A4intron0.9970.981380.01070.077887
rs1108012217:28547335T/CSLC6A4intron0.9970.996810.01370.8133a
rs11346441317:28557164A/GSLC6A4intron0.6850.970150.01350.024626
rs1165753617:28529242A/GSLC6A4intron0.8331.016740.03390.62457
rs11739039717:28561092A/TSLC6A4intron0.6700.967150.04110.41675
rs11818930017:28526585T/CSLC6A4intron0.6760.968220.05050.52267
rs1187202017:28553489A/GSLC6A4intron0.9210.969480.01150.0069844
rs1215021417:28550888C/GSLC6A4intron0.9980.997000.01370.82845
rs1244978317:28527653A/CSLC6A4intron1.0000.981870.01060.086225
rs1245095617:28529025A/GSLC6A4intron0.9950.981670.01070.083176
SNPPositionAlelleGeneAnnotationInfoOrSeP-valueeQTLScore*
Showing 1 to 10 of 42 entries

  Note: RegulomeDB score*
score supporting data score supporting data
1aeQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak6other
2aTF binding + matched TF motif + matched DNase Footprint + DNase peak5TF binding or DNase peak
1beQTL + TF binding + any motif + DNase Footprint + DNase peak4TF binding + DNase peak
2bTF binding + any motif + DNase Footprint + DNase peak3bTF binding + matched TF motif
1ceQTL + TF binding + matched TF motif + DNase peak1feQTL + TF binding / DNase peak
2cTF binding + matched TF motif + DNase peak3aTF binding + any motif + DNase peak
1deQTL + TF binding + any motif + DNase peak1eeQTL + TF binding + matched TF motif
CNV Information
ReferenceStudy typeSample size
22118685GWAS235 cases; 191 controls
ReferenceStudy typeSample size
eQTL Information