SLC18A2

Basic Information

Gene Symbol	SLC18A2
Entrez Id	6571
Position	chr10:119000584..119038941
Description	solute carrier family 18 (vesicular monoamine transporter), member 2
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10082463	10:119021407	A/C	SLC18A2	intron	0.958	1.01623	0.0174	0.3564		7
rs11197936	10:119019658	A/G	SLC18A2	intron	0.792	1.00521	0.0123	0.6717		6
rs117220249	10:119023426	T/C	SLC18A2	intron	0.946	1.03097	0.0310	0.3246		7
rs118106296	10:119034218	T/C	SLC18A2	intron	0.987	0.98236	0.0291	0.5404		7
rs12254490	10:119014188	A/G	SLC18A2	intron	0.666	0.99154	0.0284	0.7642		5
rs12781403	10:119020736	A/C	SLC18A2	intron	0.817	1.01847	0.0117	0.1173		6
rs148341074	10:119013856	T/C	SLC18A2	intron	0.797	0.99362	0.0503	0.898		-
rs149461310	10:119002489	T/C	SLC18A2	intron	0.973	0.98975	0.0257	0.6893		-
rs17095973	10:119011795	A/G	SLC18A2	intron	0.849	0.99114	0.0365	0.8079		7
rs2072362	10:119014023	T/C	SLC18A2	intron	0.876	0.98285	0.0180	0.3376		4
rs2072363	10:119014406	A/G	SLC18A2	intron	0.902	1.01643	0.0181	0.3665		4
rs2072364	10:119014408	A/G	SLC18A2	intron	0.903	1.01623	0.0181	0.374		2b
rs2240779	10:119003308	C/G	SLC18A2	intron	0.973	1.01045	0.0257	0.6849		7
rs2244249	10:119032275	A/G	SLC18A2	intron	0.992	0.99273	0.0143	0.6117		5
rs2244375	10:119031378	T/C	SLC18A2	intron	0.991	0.99223	0.0143	0.5839		7
rs2255062	10:119035475	T/G	SLC18A2	intron	0.939	0.98452	0.0139	0.2638		7
rs2255063	10:119035474	A/C	SLC18A2	intron	0.937	1.01217	0.0140	0.3883		7
rs2255321	10:119032926	T/G	SLC18A2	intron	0.997	0.99531	0.0158	0.7659		7
rs2283136	10:119006945	A/G	SLC18A2	intron	0.974	1.00894	0.0256	0.7292		5
rs2283137	10:119007549	T/C	SLC18A2	intron	0.986	1.00060	0.0123	0.9629		7
rs2283138	10:119018679	A/G	SLC18A2	intron	0.922	0.98946	0.0172	0.5391		5
rs2283139	10:119018857	A/G	SLC18A2	intron	0.737	0.91934	0.0538	0.1179		7
rs2283142	10:119031450	C/G	SLC18A2	intron	0.988	0.98600	0.0180	0.4309		6
rs2299615	10:119008728	A/G	SLC18A2	intron	0.976	1.01106	0.0256	0.6669		4
rs2532805	10:119009966	A/G	SLC18A2	intron	0.973	1.00955	0.0253	0.7064		7
rs2532806	10:119011483	T/C	SLC18A2	intron	0.776	1.00552	0.0267	0.8373		6
rs2532807	10:119013186	A/G	SLC18A2	intron	0.742	1.01521	0.0135	0.2659		7
rs2532808	10:119025561	A/G	SLC18A2	intron	0.852	1.01867	0.0166	0.2645		7
rs2532810	10:119028940	A/G	SLC18A2	intron	0.953	1.00884	0.0239	0.7144		7
rs2619093	10:119001817	T/C	SLC18A2	intron	0.986	1.00300	0.0116	0.7961		5
rs2803815	10:119010185	T/C	SLC18A2	intron	0.969	1.00955	0.0253	0.7068		3a
rs3026057	10:119014127	A/T	SLC18A2	intron	0.812	0.97045	0.0400	0.4535		3a
rs363220	10:119016690	T/C	SLC18A2	intron	0.949	1.00844	0.0136	0.5353		5
rs363221	10:119018031	T/C	SLC18A2	intron	0.966	0.96117	0.0214	0.06462		7
rs363222	10:119019448	C/G	SLC18A2	intron	0.750	0.99651	0.0134	0.7953		6
rs363223	10:119022561	A/G	SLC18A2	intron	0.965	0.97981	0.0108	0.05809		4
rs363224	10:119022573	A/C	SLC18A2	intron	0.981	0.98000	0.0107	0.05935		4
rs363225	10:119024502	T/C	SLC18A2	intron	0.975	0.98255	0.0107	0.1016		4
rs363226	10:119025212	C/G	SLC18A2	intron	0.954	0.97219	0.0116	0.01512		6
rs363227	10:119026566	T/C	SLC18A2	intron	0.994	0.99402	0.0158	0.7046		4
rs363231	10:119032488	A/G	SLC18A2	intron	0.959	1.00743	0.0238	0.7569		4
rs363245	10:119016331	T/C	SLC18A2	intron	0.913	0.98837	0.0179	0.5127		5
rs363250	10:119019461	T/C	SLC18A2	intron	0.607	1.00682	0.0449	0.8791		7
rs363251	10:119019467	A/G	SLC18A2	intron	0.846	1.00531	0.0119	0.6569		7
rs363256	10:119024225	C/G	SLC18A2	intron	0.957	1.01643	0.0175	0.3517		7
rs363257	10:119024281	T/G	SLC18A2	intron	0.956	0.96165	0.0281	0.1646		7
rs363262	10:119025967	T/C	SLC18A2	intron	0.978	0.98491	0.0181	0.4009		3a
rs363273	10:119033156	T/C	SLC18A2	intron	0.637	1.05369	0.0630	0.4066		7
rs363275	10:119033721	T/G	SLC18A2	intron	0.996	0.99144	0.0143	0.5477		5
rs363276	10:119033809	T/C	SLC18A2	intron	0.996	0.99134	0.0143	0.5425		5
rs363278	10:119035068	A/G	SLC18A2	intron	0.995	0.99054	0.0143	0.5054		7
rs363279	10:119036625	T/C	SLC18A2	intron	0.979	1.01461	0.0178	0.4151		6
rs363332	10:119002667	A/G	SLC18A2	intron	0.989	0.99980	0.0123	0.9849		5
rs363333	10:119004095	T/C	SLC18A2	intron	0.975	1.01227	0.0200	0.5419		5
rs363334	10:119004995	C/G	SLC18A2	intron	0.988	0.99960	0.0122	0.9738		6
rs363336	10:119007980	A/C	SLC18A2	intron	0.976	0.98906	0.0256	0.6664		7
rs363337	10:119008485	T/C	SLC18A2	intron	0.988	0.99970	0.0122	0.9802		4
rs363338	10:119009389	T/C	SLC18A2	intron	0.988	1.00341	0.0116	0.7663		5
rs363339	10:119010412	T/C	SLC18A2	intron	0.968	1.00160	0.0122	0.8947		5
rs363340	10:119010413	T/C	SLC18A2	intron	0.968	0.99840	0.0122	0.8932		5
rs363341	10:119010465	T/C	SLC18A2	intron	0.989	0.99870	0.0119	0.9148		5
rs363343	10:119014948	A/C	SLC18A2	intron	0.943	1.00753	0.0139	0.5897		5
rs363387	10:119003564	T/G	SLC18A2	coding-synon	0.974	1.01045	0.0257	0.6839		4
rs363390	10:119004079	C/G	SLC18A2	intron	0.979	1.00010	0.0123	0.9907		5
rs363393	10:119005767	A/T	SLC18A2	intron	0.740	0.98985	0.0155	0.5111		7
rs363395	10:119006552	A/G	SLC18A2	intron	0.719	1.04091	0.0458	0.382		5
rs363397	10:119007385	C/G	SLC18A2	intron	0.976	1.01116	0.0256	0.6651		5
rs363399	10:119008871	T/C	SLC18A2	intron	0.988	0.99950	0.0122	0.9705		5
rs363400	10:119008896	A/C	SLC18A2	intron	0.976	0.98778	0.0256	0.6302		5
rs363404	10:119009631	T/C	SLC18A2	intron	0.987	1.00080	0.0122	0.9479		6
rs363405	10:119010422	A/G	SLC18A2	intron	0.947	0.99571	0.0355	0.9029		5
rs363417	10:119014323	T/C	SLC18A2	intron	0.818	0.96996	0.0398	0.4426		5
rs363419	10:119014929	T/C	SLC18A2	intron	0.939	0.97307	0.0217	0.2078		5
rs363420	10:119014931	T/C	SLC18A2	intron	0.934	1.00793	0.0139	0.5668		5
rs57986234	10:119033471	A/G	SLC18A2	intron	0.989	1.01694	0.0286	0.5573		7
rs61560104	10:119003161	A/G	SLC18A2	intron	0.959	1.00783	0.0338	0.8171		6
rs7085415	10:119021114	T/G	SLC18A2	intron	0.969	1.01806	0.0108	0.09664		7
rs7095278	10:119025290	A/G	SLC18A2	intron	0.944	1.02112	0.0109	0.05538		7
rs73389860	10:119018161	T/G	SLC18A2	intron	0.639	1.02501	0.0617	0.6888		6
rs74466450	10:119035346	A/G	SLC18A2	intron	0.992	1.02757	0.0297	0.3592		7
rs75072165	10:119031082	C/G	SLC18A2	intron	0.976	1.01582	0.0293	0.5926		5
rs75464299	10:119024305	A/G	SLC18A2	intron	0.608	1.06652	0.0431	0.1349		7
rs79731304	10:119018260	T/C	SLC18A2	intron	0.933	1.03138	0.0217	0.1531		7
rs929493	10:119019126	T/C	SLC18A2	intron	0.934	1.00451	0.0141	0.7477		7
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information