Gene Symbol | SLC12A4 |
---|---|
Entrez Id | 6560 |
Position | chr16:67977377..68002597 |
Description | solute carrier family 12 (potassium/chloride transporter), member 4 |
Gene type | protein-coding |
SNP | Position | Alelle | Gene | Annotation | Info | Or | Se | P-value | eQTL | Score* |
---|---|---|---|---|---|---|---|---|---|---|
rs116856853 | 16:67984804 | A/G | SLC12A4 | intron | 0.997 | 1.08480 | 0.0260 | 0.001737 | ![]() | 5 |
rs116996900 | 16:67988921 | A/G | SLC12A4 | intron | 0.721 | 0.99322 | 0.0443 | 0.8785 | ![]() | 5 |
rs117213038 | 16:67981697 | T/C | SLC12A4 | intron | 0.747 | 1.00592 | 0.0623 | 0.9245 | ![]() | 5 |
rs117838106 | 16:67998850 | A/G | SLC12A4 | intron,near-gene-5 | 0.820 | 0.98521 | 0.0611 | 0.8068 | ![]() | 4 |
rs118000276 | 16:67988447 | A/G | SLC12A4 | intron | 0.801 | 0.93044 | 0.0498 | 0.1475 | ![]() | 5 |
rs11860125 | 16:67980969 | C/G | SLC12A4 | coding-synon | 0.987 | 1.07983 | 0.0241 | 0.001447 | ![]() | 5 |
rs143244172 | 16:67984104 | A/G | SLC12A4 | intron | 0.792 | 1.08426 | 0.0570 | 0.1552 | ![]() | - |
rs147329698 | 16:68001555 | A/G | SLC12A4 | intron,near-gene-5 | 0.761 | 1.01187 | 0.0376 | 0.7533 | ![]() | - |
rs148081073 | 16:67990669 | T/C | SLC12A4 | intron | 0.833 | 0.92969 | 0.0457 | 0.1107 | ![]() | - |
rs17851876 | 16:67979423 | T/G | SLC12A4 | coding-synon,near-gene-5 | 0.734 | 0.99930 | 0.0245 | 0.9785 | ![]() | 5 |
SNP | Position | Alelle | Gene | Annotation | Info | Or | Se | P-value | eQTL | Score* |
score | supporting data | score | supporting data |
---|---|---|---|
1a | eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak | 6 | other |
2a | TF binding + matched TF motif + matched DNase Footprint + DNase peak | 5 | TF binding or DNase peak |
1b | eQTL + TF binding + any motif + DNase Footprint + DNase peak | 4 | TF binding + DNase peak |
2b | TF binding + any motif + DNase Footprint + DNase peak | 3b | TF binding + matched TF motif |
1c | eQTL + TF binding + matched TF motif + DNase peak | 1f | eQTL + TF binding / DNase peak |
2c | TF binding + matched TF motif + DNase peak | 3a | TF binding + any motif + DNase peak |
1d | eQTL + TF binding + any motif + DNase peak | 1e | eQTL + TF binding + matched TF motif |
The gene is not affected by CNV!