Gene Symbol | SEZ6L2 |
---|---|
Entrez Id | 26470 |
Position | chr16:29882480..29910580 |
Description | seizure related 6 homolog (mouse)-like 2 |
Gene type | protein-coding |
SNP | Position | Alelle | Gene | Annotation | Info | Or | Se | P-value | eQTL | Score* |
---|---|---|---|---|---|---|---|---|---|---|
rs112796947 | 16:29902840 | T/C | SEZ6L2 | intron | 0.812 | 1.02675 | 0.0180 | 0.1426 | ![]() | 5 |
rs113443718 | 16:29892184 | A/G | SEZ6L2 | intron | 0.935 | 0.98511 | 0.0121 | 0.2149 | ![]() | 7 |
rs113753753 | 16:29891206 | T/C | SEZ6L2 | missense | 0.685 | 0.98758 | 0.0441 | 0.7769 | ![]() | 5 |
rs11649499 | 16:29908433 | C/G | SEZ6L2 | intron,missense | 0.802 | 0.99970 | 0.0146 | 0.9844 | ![]() | 5 |
rs12325239 | 16:29894662 | T/C | SEZ6L2 | intron | 0.673 | 0.94082 | 0.0355 | 0.08524 | ![]() | 7 |
rs12917712 | 16:29882490 | T/C | SEZ6L2 | untranslated-3 | 1.000 | 0.98167 | 0.0113 | 0.1016 | ![]() | 6 |
rs12919612 | 16:29895303 | C/G | SEZ6L2 | intron | 0.963 | 0.97716 | 0.0112 | 0.04039 | ![]() | 7 |
rs12930239 | 16:29908777 | C/G | SEZ6L2 | intron | 0.967 | 1.02235 | 0.0112 | 0.04947 | ![]() | 5 |
rs13332660 | 16:29905882 | T/C | SEZ6L2 | intron | 0.813 | 1.00210 | 0.0146 | 0.8876 | ![]() | 6 |
rs141162502 | 16:29904640 | T/C | SEZ6L2 | intron | 0.629 | 1.05253 | 0.0545 | 0.3483 | ![]() | - |
SNP | Position | Alelle | Gene | Annotation | Info | Or | Se | P-value | eQTL | Score* |
score | supporting data | score | supporting data |
---|---|---|---|
1a | eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak | 6 | other |
2a | TF binding + matched TF motif + matched DNase Footprint + DNase peak | 5 | TF binding or DNase peak |
1b | eQTL + TF binding + any motif + DNase Footprint + DNase peak | 4 | TF binding + DNase peak |
2b | TF binding + any motif + DNase Footprint + DNase peak | 3b | TF binding + matched TF motif |
1c | eQTL + TF binding + matched TF motif + DNase peak | 1f | eQTL + TF binding / DNase peak |
2c | TF binding + matched TF motif + DNase peak | 3a | TF binding + any motif + DNase peak |
1d | eQTL + TF binding + any motif + DNase peak | 1e | eQTL + TF binding + matched TF motif |
Reference | Study type | Sample size |
---|---|---|
19855392 | Regional | 4551 cases; 6391 controls |
Reference | Study type | Sample size |