SEPT3

Basic Information

Gene Symbol	SEPT3
Entrez Id	55964
Position	chr22:42372931..42394225
Description	septin 3
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs11090065	22:42384171	T/C	SEPT3	intron	0.997	1.03614	0.0116	0.002263		6
rs112204402	22:42381703	T/C	SEPT3	intron	0.612	1.03045	0.0346	0.386		5
rs117582565	22:42385399	T/C	SEPT3	intron	0.823	0.96348	0.0398	0.3503		7
rs117644134	22:42384019	T/C	SEPT3	intron	0.790	1.01430	0.0498	0.7757		7
rs117969468	22:42384172	T/G	SEPT3	intron	0.925	0.96435	0.0246	0.1401		6
rs118061137	22:42374985	T/C	SEPT3	intron	0.741	0.95648	0.0489	0.3635		2b
rs118142868	22:42382437	T/C	SEPT3	intron	0.925	1.03697	0.0246	0.1404		6
rs13053833	22:42372381	T/C	SEPT3	near-gene-5	0.818	0.99114	0.0626	0.8873		5
rs133300	22:42389839	A/G	SEPT3	intron	1.000	0.94677	0.0107	3.054E-7		6
rs138798060	22:42386838	T/C	SEPT3	intron	0.618	0.95514	0.0516	0.3737		-
rs146951100	22:42386487	T/C	SEPT3	intron	0.756	0.97893	0.0226	0.346		-
rs147597180	22:42386494	A/G	SEPT3	intron	0.730	1.03572	0.0482	0.4669		-
rs148140943	22:42386534	A/G	SEPT3	intron	0.819	0.92284	0.0240	0.0008001		-
rs186206123	22:42392404	T/C	SEPT3	intron,near-gene-5,untranslated-3	0.845	0.99432	0.0689	0.9339		-
rs188492459	22:42373644	T/G	SEPT3	intron	0.614	1.02245	0.0700	0.7514		-
rs2097561	22:42389431	T/C	SEPT3	intron	0.999	1.03386	0.0119	0.005268		7
rs2097562	22:42389500	T/C	SEPT3	intron	0.999	1.03386	0.0119	0.005279		6
rs4820451	22:42371333	T/C	SEPT3	near-gene-5	0.991	0.96050	0.0133	0.002506		5
rs4820454	22:42385352	A/G	SEPT3	intron,ncRNA	0.997	0.95945	0.0133	0.001826		7
rs4822077	22:42376964	A/G	SEPT3	intron	0.994	1.05622	0.0136	0.00005952		5
rs58874647	22:42386269	T/C	SEPT3	intron	0.969	0.96609	0.0122	0.004597		7
rs5996098	22:42386546	A/G	SEPT3	intron	0.615	1.10783	0.0487	0.03558		7
rs62241000	22:42378507	T/C	SEPT3	intron	0.995	0.96532	0.0116	0.00238		7
rs62241023	22:42385429	A/G	SEPT3	intron	0.978	0.99501	0.0130	0.6991		7
rs6519301	22:42385967	A/G	SEPT3	intron	1.000	0.94611	0.0107	2.123E-7		6
rs739293	22:42373648	T/C	SEPT3	intron	0.982	1.05148	0.0135	0.0002085		5
rs739294	22:42381726	T/C	SEPT3	intron	0.981	0.95228	0.0108	6.372E-6		5
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information