RLTPR

Basic Information

Gene Symbol	RLTPR
Entrez Id	146206
Position	chr16:67679030..67691472
Description	RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing
Gene type	protein coding

SNP Information

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SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs117444844	16:67691258	T/C	RLTPR	intron,near-gene-3	0.994	1.08578	0.0261	0.001595		5
rs117556162	16:67680806	A/G	RLTPR	ncRNA,missense	0.668	1.01725	0.0285	0.5468		5
rs117588403	16:67677877	T/C	RLTPR	near-gene-5	0.856	0.89030	0.0473	0.01409		5
rs118040419	16:67683449	A/G	RLTPR	ncRNA,missense	0.749	1.03386	0.0540	0.5374		5
rs139104491	16:67682497	A/G	RLTPR	intron	0.993	0.92182	0.0261	0.001829		-
rs141278110	16:67681548	A/C	RLTPR	intron	0.878	1.06322	0.0538	0.2546		-
rs147103712	16:67678157	T/C	RLTPR	near-gene-5	0.699	0.90747	0.0412	0.01842		-
rs151114296	16:67678162	A/G	RLTPR	near-gene-5	0.699	0.90747	0.0412	0.01842		-
rs189587636	16:67688103	A/G	RLTPR	ncRNA,missense	0.804	0.93763	0.0632	0.3084		-
rs59376497	16:67681170	T/C	RLTPR	intron	0.995	1.07702	0.0248	0.002791		5
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Showing 1 to 10 of 23 entries

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Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information