REEP2

Basic Information

Gene Symbol	REEP2
Entrez Id	51308
Position	chr5:137774776..137782658
Description	receptor accessory protein 2
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs1046576	5:137782335	A/G	REEP2	ncRNA,untranslated-3	0.997	1.04760	0.0107	0.00001319		5
rs111848060	5:137776440	A/G	REEP2	intron	0.945	0.97151	0.0321	0.3685		5
rs113089597	5:137777610	T/C	REEP2	intron	0.816	0.96860	0.0280	0.2555		7
rs114042687	5:137781453	T/C	REEP2	ncRNA,untranslated-3	0.653	0.96012	0.0583	0.4849		2b
rs116649680	5:137779477	T/C	REEP2	intron	0.853	1.12716	0.0353	0.0006888		7
rs12514520	5:137778068	T/C	REEP2	intron	0.996	1.02696	0.0110	0.01593		5
rs12516269	5:137777269	A/G	REEP2	intron	0.994	1.03396	0.0109	0.002089		5
rs12659034	5:137773525	T/C	REEP2	near-gene-5	0.993	0.96069	0.0126	0.001534		5
rs144129673	5:137779122	T/C	REEP2	intron	0.856	1.11628	0.0302	0.0002642		-
rs190729345	5:137781300	A/G	REEP2	intron	0.898	1.01867	0.0572	0.7465		-
rs2240330	5:137780631	T/C	REEP2	intron	0.988	0.96425	0.0134	0.00643		5
rs2240331	5:137780368	A/C	REEP2	intron	0.997	0.95247	0.0107	4.884E-6		5
rs2269947	5:137776931	T/C	REEP2	intron	0.995	0.96686	0.0109	0.001894		5
rs2277067	5:137775273	A/G	REEP2	intron	0.997	0.97385	0.0110	0.01595		2b
rs2350639	5:137778919	T/G	REEP2	intron	0.995	0.97307	0.0110	0.0135		6
rs2350640	5:137778981	A/C	REEP2	intron	0.966	1.05075	0.0108	4.38E-6		6
rs34747207	5:137778338	A/G	REEP2	intron	0.984	1.03676	0.0133	0.006877		7
rs35774663	5:137778320	A/G	REEP2	intron	0.943	0.97122	0.0133	0.02863		7
rs3798153	5:137782204	A/C	REEP2	ncRNA,untranslated-3	0.997	1.04781	0.0107	0.00001187		5
rs4835796	5:137782115	T/G	REEP2	ncRNA,untranslated-3	0.997	1.04718	0.0107	0.00001558		2b
rs72803898	5:137775613	A/G	REEP2	intron	0.985	0.94393	0.0308	0.06102		4
rs72803900	5:137777857	A/G	REEP2	intron	0.982	0.94337	0.0311	0.06035		5
rs77085797	5:137776297	A/G	REEP2	intron	0.973	1.02829	0.0169	0.09873		5
rs982085	5:137775581	C/G	REEP2	intron	0.996	1.05781	0.0108	1.988E-7		4
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information