Gene Symbol | RASSF1 |
---|---|
Entrez Id | 11186 |
Position | chr3:50367217..50378367 |
Description | Ras association domain family member 1 |
Gene type | protein-coding |
SNP | Position | Alelle | Gene | Annotation | Info | Or | Se | P-value | eQTL | Score* |
---|---|---|---|---|---|---|---|---|---|---|
rs138340694 | 3:50372888 | T/C | RASSF1 | intron | 0.630 | 0.98580 | 0.0859 | 0.8683 | ![]() | - |
rs2073498 | 3:50369546 | A/C | RASSF1 | missense,untranslated-5 | 0.997 | 1.00481 | 0.0168 | 0.7753 | ![]() | 7 |
rs2236947 | 3:50371432 | A/C | RASSF1 | intron | 0.968 | 1.01461 | 0.0109 | 0.1829 | ![]() | 1f |
rs34495934 | 3:50371757 | A/G | RASSF1 | intron | 0.796 | 0.99710 | 0.0336 | 0.9323 | ![]() | 5 |
rs4688725 | 3:50378176 | T/G | RASSF1 | intron,near-gene-3,missense,untranslated-5 | 0.937 | 0.85796 | 0.0391 | 0.00008923 | ![]() | 2b |
rs73082910 | 3:50368955 | A/C | RASSF1 | intron | 0.678 | 0.99960 | 0.0302 | 0.9898 | ![]() | 7 |
rs78501918 | 3:50369914 | A/G | RASSF1 | intron | 0.997 | 0.99501 | 0.0168 | 0.7667 | ![]() | 7 |
SNP | Position | Alelle | Gene | Annotation | Info | Or | Se | P-value | eQTL | Score* |
score | supporting data | score | supporting data |
---|---|---|---|
1a | eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak | 6 | other |
2a | TF binding + matched TF motif + matched DNase Footprint + DNase peak | 5 | TF binding or DNase peak |
1b | eQTL + TF binding + any motif + DNase Footprint + DNase peak | 4 | TF binding + DNase peak |
2b | TF binding + any motif + DNase Footprint + DNase peak | 3b | TF binding + matched TF motif |
1c | eQTL + TF binding + matched TF motif + DNase peak | 1f | eQTL + TF binding / DNase peak |
2c | TF binding + matched TF motif + DNase peak | 3a | TF binding + any motif + DNase peak |
1d | eQTL + TF binding + any motif + DNase peak | 1e | eQTL + TF binding + matched TF motif |
The gene is not affected by CNV!