| Gene Symbol | RASSF1 |
|---|---|
| Entrez Id | 11186 |
| Position | chr3:50367217..50378367 |
| Description | Ras association domain family member 1 |
| Gene type | protein-coding |
| SNP | Position | Alelle | Gene | Annotation | Info | Or | Se | P-value | eQTL | Score* |
|---|---|---|---|---|---|---|---|---|---|---|
| rs138340694 | 3:50372888 | T/C | RASSF1 | intron | 0.630 | 0.98580 | 0.0859 | 0.8683 | - | |
| rs2073498 | 3:50369546 | A/C | RASSF1 | missense,untranslated-5 | 0.997 | 1.00481 | 0.0168 | 0.7753 | 7 | |
| rs2236947 | 3:50371432 | A/C | RASSF1 | intron | 0.968 | 1.01461 | 0.0109 | 0.1829 | 1f | |
| rs34495934 | 3:50371757 | A/G | RASSF1 | intron | 0.796 | 0.99710 | 0.0336 | 0.9323 | 5 | |
| rs4688725 | 3:50378176 | T/G | RASSF1 | intron,near-gene-3,missense,untranslated-5 | 0.937 | 0.85796 | 0.0391 | 0.00008923 | 2b | |
| rs73082910 | 3:50368955 | A/C | RASSF1 | intron | 0.678 | 0.99960 | 0.0302 | 0.9898 | 7 | |
| rs78501918 | 3:50369914 | A/G | RASSF1 | intron | 0.997 | 0.99501 | 0.0168 | 0.7667 | 7 | |
| SNP | Position | Alelle | Gene | Annotation | Info | Or | Se | P-value | eQTL | Score* |
| score | supporting data | score | supporting data |
|---|---|---|---|
| 1a | eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak | 6 | other |
| 2a | TF binding + matched TF motif + matched DNase Footprint + DNase peak | 5 | TF binding or DNase peak |
| 1b | eQTL + TF binding + any motif + DNase Footprint + DNase peak | 4 | TF binding + DNase peak |
| 2b | TF binding + any motif + DNase Footprint + DNase peak | 3b | TF binding + matched TF motif |
| 1c | eQTL + TF binding + matched TF motif + DNase peak | 1f | eQTL + TF binding / DNase peak |
| 2c | TF binding + matched TF motif + DNase peak | 3a | TF binding + any motif + DNase peak |
| 1d | eQTL + TF binding + any motif + DNase peak | 1e | eQTL + TF binding + matched TF motif |
The gene is not affected by CNV!