RANBP1

Basic Information

Gene Symbol	RANBP1
Entrez Id	5902
Position	chr22:20105024..20114704
Description	RAN binding protein 1
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs111522241	22:20108736	A/G	RANBP1	intron	0.868	0.98403	0.0236	0.4949		5
rs139712874	22:20114239	T/G	RANBP1	intron,untranslated-3	0.834	1.07347	0.0681	0.2975		-
rs142904981	22:20113566	T/C	RANBP1	intron	0.712	0.99352	0.0651	0.9203		-
rs1640407	22:20109088	A/T	RANBP1	intron	0.982	1.09713	0.0294	0.001623		6
rs175162	22:20113253	T/G	RANBP1	intron	0.999	0.97619	0.0118	0.04188		1f
rs175163	22:20113777	T/C	RANBP1	intron	0.998	0.97580	0.0118	0.0388		2b
rs2238798	22:20107729	A/G	RANBP1	intron	0.978	0.97932	0.0155	0.1783		2b
rs2238799	22:20109325	A/G	RANBP1	intron	0.982	0.98916	0.0108	0.3126		5
rs2871050	22:20106104	T/C	RANBP1	intron,near-gene-5	0.986	0.93716	0.0225	0.003846		2b
rs2871051	22:20108940	T/G	RANBP1	intron	0.992	0.93838	0.0226	0.004896		6
rs4589855	22:20106069	A/C	RANBP1	intron,near-gene-5	0.991	1.06599	0.0225	0.004478		5
rs60558247	22:20107113	T/C	RANBP1	intron	0.815	1.10241	0.0582	0.09416		7
rs72490649	22:20109670	T/C	RANBP1	intron	0.992	1.06556	0.0226	0.004928		4
rs738024	22:20112521	T/C	RANBP1	intron	0.986	0.93857	0.0226	0.004967		5
rs73877140	22:20107464	T/G	RANBP1	intron	1.000	0.91229	0.0291	0.001588		4
rs73877141	22:20108062	T/C	RANBP1	intron	1.000	1.09615	0.0291	0.001581		2b
rs75229755	22:20107957	T/C	RANBP1	intron	0.991	0.93819	0.0225	0.004555		4
rs76318258	22:20111676	T/C	RANBP1	intron	0.991	1.06631	0.0226	0.004483		3a
rs9606256	22:20108500	A/G	RANBP1	intron	1.000	1.03128	0.0138	0.02567		5
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

Reference	Study type	Sample size
18668038	GWAS	3391 cases; 3181 controls
18511947	GWAS	359 cases; 718 controls
19181681	GWAS	471 cases; 2792 controls
Reference	Study type	Sample size

eQTL Information