QPCT

Basic Information

Gene Symbol	QPCT
Entrez Id	25797
Position	chr2:37571753..37600465
Description	glutaminyl-peptide cyclotransferase
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10170761	2:37570538	T/G	QPCT	near-gene-5	0.981	1.09702	0.0252	0.0002344		5
rs10179447	2:37578208	A/G	QPCT	intron	0.953	0.97385	0.0110	0.01586		4
rs10189564	2:37581254	A/G	QPCT	intron	0.887	1.03087	0.0355	0.3921		6
rs10196818	2:37576852	A/G	QPCT	intron	0.972	1.03645	0.0109	0.0009814		5
rs10198567	2:37591037	T/C	QPCT	intron	0.792	1.00702	0.0282	0.8035		6
rs10490448	2:37599680	A/G	QPCT	intron	0.854	1.02214	0.0280	0.4342		7
rs10724	2:37600292	A/C	QPCT	untranslated-3	0.656	0.98936	0.0314	0.7327		6
rs10865124	2:37576553	A/G	QPCT	intron	0.972	1.03252	0.0109	0.003349		5
rs114251190	2:37586247	T/G	QPCT	intron	0.989	1.02747	0.0299	0.3647		7
rs114681115	2:37573194	T/C	QPCT	intron	0.608	0.97580	0.0667	0.7138		4
rs115152661	2:37571291	A/T	QPCT	near-gene-5	0.920	0.90484	0.0461	0.02997		4
rs115208263	2:37579073	T/C	QPCT	intron	0.992	0.97181	0.0299	0.3383		7
rs116357370	2:37573442	A/G	QPCT	intron	0.801	0.93576	0.0409	0.1049		5
rs11886606	2:37598998	A/G	QPCT	intron	0.972	0.98728	0.0244	0.5995		7
rs11902200	2:37589811	A/G	QPCT	intron	0.985	0.97619	0.0617	0.6957		7
rs11903018	2:37593243	T/C	QPCT	intron	0.943	0.97726	0.0132	0.08292		7
rs12468307	2:37574965	T/G	QPCT	intron	0.909	0.96715	0.0348	0.3377		7
rs12472984	2:37575097	A/G	QPCT	intron	0.904	0.96464	0.0352	0.306		6
rs138286686	2:37579583	T/C	QPCT	intron	0.647	0.98108	0.0374	0.609		-
rs139153753	2:37596149	A/G	QPCT	intron	0.737	0.98157	0.0471	0.6925		-
rs140018036	2:37589488	T/C	QPCT	intron	0.785	1.06919	0.0411	0.1039		-
rs140653724	2:37585996	C/G	QPCT	intron	0.667	1.00944	0.0483	0.845		-
rs188750724	2:37574126	A/G	QPCT	intron	0.963	1.02439	0.0517	0.6412		-
rs2058718	2:37583797	C/G	QPCT	intron	0.989	0.97385	0.0617	0.6676		6
rs2058719	2:37583621	T/C	QPCT	intron	0.959	1.03800	0.0524	0.4768		7
rs2255991	2:37579971	T/C	QPCT	missense	0.918	1.03190	0.0344	0.3613		6
rs2270331	2:37572350	C/G	QPCT	intron	0.976	0.97210	0.0106	0.007832		2b
rs2287094	2:37599688	A/G	QPCT	intron	0.974	0.98886	0.0244	0.6469		7
rs2302651	2:37586681	A/G	QPCT	intron	0.969	0.96773	0.0115	0.004172		7
rs2372998	2:37573556	A/G	QPCT	intron	0.976	0.97375	0.0109	0.01424		5
rs2372999	2:37573587	T/C	QPCT	intron	0.966	1.02788	0.0109	0.01158		5
rs2373000	2:37592628	T/C	QPCT	intron	0.990	1.03998	0.0107	0.0002673		7
rs2373001	2:37598421	T/C	QPCT	intron	0.975	0.98364	0.0209	0.4285		7
rs28384455	2:37571237	T/C	QPCT	near-gene-5	0.967	0.95916	0.0334	0.212		4
rs2888464	2:37598512	A/G	QPCT	intron	0.973	1.01359	0.0244	0.5818		6
rs34231434	2:37593428	C/G	QPCT	intron	0.845	1.01786	0.0273	0.5172		7
rs34763736	2:37573259	T/C	QPCT	intron	0.855	0.96425	0.0140	0.009561		5
rs35576045	2:37570179	T/G	QPCT	near-gene-5	0.669	1.07101	0.0423	0.105		5
rs3815555	2:37587040	A/C	QPCT	intron	0.938	1.04770	0.0363	0.1986		7
rs3821141	2:37596378	A/C	QPCT	intron	0.894	0.97181	0.0177	0.1064		7
rs3821142	2:37575287	T/C	QPCT	intron	0.975	0.97249	0.0109	0.01018		6
rs41280633	2:37594594	A/G	QPCT	intron	0.853	1.04928	0.0358	0.1789		5
rs4384764	2:37590284	A/G	QPCT	intron	0.985	1.03946	0.0119	0.00115		5
rs4444500	2:37574227	A/C	QPCT	intron	0.971	1.03221	0.0107	0.002927		6
rs4670196	2:37587132	T/C	QPCT	intron	0.944	1.04383	0.0334	0.1995		6
rs4670692	2:37573246	A/G	QPCT	intron	0.974	0.97463	0.0109	0.01835		5
rs4670696	2:37599963	A/C	QPCT	missense	0.965	0.99074	0.0259	0.7202		7
rs4670697	2:37599988	T/G	QPCT	untranslated-3	0.978	1.00975	0.0244	0.6915		6
rs5017960	2:37574323	A/T	QPCT	intron	0.606	1.03479	0.0220	0.1207		6
rs62133300	2:37582979	A/T	QPCT	intron	0.977	1.07304	0.0437	0.1069		7
rs6544068	2:37571297	T/C	QPCT	near-gene-5	0.966	0.96503	0.0107	0.000873		4
rs6544069	2:37600587	T/C	QPCT	near-gene-3	0.975	0.99035	0.0244	0.6915		7
rs72792854	2:37593044	A/G	QPCT	intron	0.914	1.02511	0.0240	0.3018		2b
rs72792856	2:37597948	A/C	QPCT	intron	0.858	1.01238	0.0402	0.7593		7
rs72792858	2:37600924	T/C	QPCT	near-gene-3	0.857	0.98906	0.0403	0.7855		7
rs72864855	2:37581367	A/G	QPCT	intron	0.894	0.98620	0.0288	0.6287		7
rs72864893	2:37593775	T/C	QPCT	intron	0.881	0.94904	0.0316	0.09799		7
rs72866719	2:37599227	T/C	QPCT	intron	0.973	0.98837	0.0244	0.6329		7
rs74530201	2:37582686	A/G	QPCT	intron	0.692	1.04123	0.0310	0.1927		7
rs74532908	2:37600808	T/C	QPCT	near-gene-3	0.974	1.00823	0.0245	0.7362		6
rs74642956	2:37576277	A/C	QPCT	intron	0.991	1.02912	0.0299	0.3371		5
rs74699275	2:37570677	A/G	QPCT	near-gene-5	0.981	0.91110	0.0252	0.0002166		4
rs74958486	2:37586077	T/C	QPCT	intron	0.989	0.97326	0.0299	0.3642		7
rs75573663	2:37573119	T/C	QPCT	intron	0.970	0.96137	0.0332	0.2346		4
rs75719148	2:37571159	A/T	QPCT	near-gene-5	0.988	0.97074	0.0299	0.3206		4
rs76014063	2:37594158	T/G	QPCT	intron	0.862	1.04728	0.0356	0.1939		4
rs76483088	2:37569955	T/C	QPCT	near-gene-5	0.988	1.02737	0.0300	0.3677		2b
rs76610995	2:37578364	A/C	QPCT	intron	0.992	1.02901	0.0299	0.3388		4
rs77068433	2:37579467	A/T	QPCT	intron	0.992	1.02901	0.0299	0.3384		6
rs77377312	2:37594316	A/G	QPCT	intron	0.859	0.95466	0.0357	0.1934		5
rs77684493	2:37579159	C/G	QPCT	intron	0.912	1.04728	0.0344	0.1793		6
rs77921587	2:37570694	A/G	QPCT	near-gene-5	0.982	0.93407	0.0197	0.0005264		4
rs78199787	2:37571697	C/G	QPCT	near-gene-5	0.989	1.02891	0.0300	0.3423		5
rs78344446	2:37594741	A/T	QPCT	intron	0.851	1.04781	0.0359	0.1928		5
rs78939209	2:37594843	T/C	QPCT	intron	0.889	1.02163	0.0507	0.6731		7
rs79078282	2:37574019	C/G	QPCT	intron	0.963	0.97609	0.0517	0.6403		5
rs79534557	2:37577919	A/G	QPCT	intron	0.992	0.97181	0.0299	0.3387		7
rs79609894	2:37576915	C/G	QPCT	intron	0.910	1.04749	0.0347	0.1816		5
rs79665800	2:37592006	T/C	QPCT	intron	0.891	1.00995	0.0292	0.7336		6
rs79963561	2:37579192	T/C	QPCT	intron	0.913	0.95667	0.0344	0.198		7
rs80023507	2:37585009	A/C	QPCT	intron	0.990	1.02778	0.0299	0.3606		4
rs80205663	2:37597386	T/C	QPCT	intron	0.862	0.99990	0.0291	0.997		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information