PRODH

Basic Information

Gene Symbol	PRODH
Entrez Id	5625
Position	chr22:18900287..18924066
Description	proline dehydrogenase (oxidase) 1
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10712298	22:18919197	I2/D	PRODH	intron	0.898	0.99860	0.0116	0.9009		-
rs1076466	22:18907124	A/G	PRODH	intron	0.799	1.02419	0.0120	0.04609		5
rs111404325	22:18913277	C/G	PRODH	intron	0.894	0.99990	0.0303	0.9968		3a
rs111676017	22:18911340	A/C	PRODH	intron	0.854	0.97336	0.0429	0.5286		5
rs112736533	22:18913051	A/G	PRODH	intron	0.899	1.00602	0.0306	0.8455		4
rs113004536	22:18923443	A/G	PRODH	intron	0.905	1.00150	0.0371	0.9672		4
rs113670666	22:18919856	T/C	PRODH	intron	0.602	1.02716	0.0485	0.5806		4
rs113812211	22:18923810	C/G	PRODH	intron,untranslated-5	0.850	1.03241	0.0204	0.1189		4
rs115670290	22:18920313	T/G	PRODH	intron	0.831	1.00652	0.0432	0.8798		7
rs115684536	22:18919854	A/G	PRODH	intron	0.948	0.99541	0.0375	0.9031		4
rs117149400	22:18923349	A/G	PRODH	intron	0.829	0.99054	0.0433	0.8254		5
rs117644700	22:18923373	T/G	PRODH	intron	0.863	0.97103	0.0206	0.1529		2b
rs117935223	22:18911333	A/C	PRODH	intron	0.822	0.99402	0.0222	0.7859		5
rs11912082	22:18912852	T/C	PRODH	intron	0.898	1.00562	0.0305	0.8555		5
rs11912152	22:18912779	T/C	PRODH	intron	0.894	0.99900	0.0303	0.975		5
rs11913229	22:18906730	A/G	PRODH	intron	0.820	1.02327	0.0322	0.4749		5
rs11913404	22:18906805	T/C	PRODH	intron	0.839	1.02102	0.0333	0.5323		5
rs11913840	22:18912677	T/C	PRODH	missense	0.864	1.00210	0.0328	0.9495		5
rs12160539	22:18921069	A/G	PRODH	intron	0.856	0.96802	0.0202	0.1071		7
rs13058335	22:18910479	T/C	PRODH	intron	0.821	0.99362	0.0222	0.7733		5
rs144041368	22:18907827	T/G	PRODH	intron	0.822	1.07455	0.0508	0.1566		-
rs146648839	22:18923629	T/C	PRODH	intron,missense	0.924	1.00130	0.0373	0.9723		-
rs148005017	22:18917109	A/C	PRODH	intron	0.852	1.04624	0.0585	0.4403		-
rs16983466	22:18905978	A/G	PRODH	coding-synon	0.766	1.00050	0.0172	0.9775		5
rs16983593	22:18918825	T/C	PRODH	intron	0.962	1.01005	0.0367	0.7859		4
rs17743045	22:18918218	A/G	PRODH	intron	0.882	1.01704	0.0163	0.3019		4
rs17743056	22:18918267	T/C	PRODH	intron	0.883	1.01572	0.0163	0.3409		4
rs17810231	22:18913312	A/G	PRODH	intron	0.648	0.98728	0.0188	0.4951		3a
rs2078641	22:18906655	T/C	PRODH	intron	0.759	0.97200	0.0122	0.02057		5
rs2238731	22:18905977	T/C	PRODH	missense	0.727	0.95418	0.0449	0.2965		5
rs2238732	22:18915347	T/C	PRODH	intron	0.856	0.96281	0.0262	0.1484		5
rs2238733	22:18916756	A/C	PRODH	intron	0.899	1.01157	0.0135	0.3945		5
rs2241305	22:18912429	A/G	PRODH	intron	0.868	1.01939	0.0205	0.3486		5
rs2277834	22:18910545	T/C	PRODH	intron	0.882	1.00130	0.0144	0.9273		5
rs2540623	22:18904838	T/G	PRODH	intron	0.863	1.01684	0.0212	0.4325		5
rs2543961	22:18904812	A/G	PRODH	intron	0.861	0.98669	0.0212	0.5282		5
rs28521080	22:18904969	T/C	PRODH	intron	0.651	0.98423	0.0188	0.3981		5
rs28541435	22:18911771	T/C	PRODH	intron	0.839	0.96435	0.0265	0.1709		7
rs28750191	22:18905117	A/G	PRODH	intron	0.930	1.02306	0.0227	0.3155		5
rs2904552	22:18905964	T/C	PRODH	missense	0.729	0.99830	0.0212	0.9345		5
rs35478331	22:18909155	I2/D	PRODH	intron	0.862	1.02286	0.0115	0.04861		-
rs3788287	22:18921917	A/G	PRODH	intron	0.928	0.99223	0.0113	0.4887		6
rs3788288	22:18922022	T/C	PRODH	intron	0.895	1.00160	0.0114	0.8896		6
rs378830	22:18913602	A/G	PRODH	intron	0.921	0.99054	0.0114	0.409		2b
rs380705	22:18912848	A/G	PRODH	intron	0.839	0.99243	0.0277	0.7839		5
rs3815653	22:18923524	A/G	PRODH	intron	0.848	1.02778	0.0201	0.1731		2b
rs3815655	22:18923713	A/G	PRODH	intron,missense	0.779	1.01440	0.0202	0.4793		2b
rs382067	22:18906705	A/G	PRODH	intron	0.744	1.02214	0.0123	0.07582		5
rs395274	22:18903092	A/G	PRODH	intron	0.690	0.99134	0.0192	0.6481		5
rs3970551	22:18906839	A/G	PRODH	intron	0.684	0.99880	0.0213	0.9538		5
rs3970562	22:18906491	T/G	PRODH	intron	0.615	0.98079	0.0280	0.4883		5
rs416331	22:18921239	T/C	PRODH	intron	0.914	1.00975	0.0115	0.4002		5
rs419885	22:18904144	A/G	PRODH	intron	0.732	0.98246	0.0199	0.3737		5
rs426237	22:18904643	A/G	PRODH	intron	0.684	0.99352	0.0192	0.7337		5
rs4269009	22:18910844	A/G	PRODH	intron	0.835	1.03645	0.0266	0.1783		5
rs430932	22:18902852	T/C	PRODH	intron	0.769	0.98472	0.0190	0.4166		5
rs432841	22:18905624	A/G	PRODH	intron	0.661	0.98275	0.0143	0.2232		5
rs445474	22:18905295	C/G	PRODH	intron	0.902	0.97268	0.0223	0.2134		5
rs445612	22:18905523	T/C	PRODH	intron	0.744	0.99302	0.0144	0.628		5
rs454278	22:18903854	T/G	PRODH	intron	0.922	1.01908	0.0219	0.3877		6
rs4819757	22:18920516	T/C	PRODH	intron	0.923	1.00874	0.0113	0.4417		7
rs4819758	22:18921062	T/G	PRODH	intron	0.862	1.00572	0.0115	0.6209		7
rs4819759	22:18921223	T/C	PRODH	intron	0.894	1.00150	0.0114	0.8977		5
rs5993422	22:18918008	C/G	PRODH	intron	0.882	1.01755	0.0163	0.2859		5
rs67269695	22:18918430	T/C	PRODH	intron	0.882	0.98462	0.0164	0.3447		5
rs67625420	22:18918760	T/C	PRODH	intron	0.888	0.98738	0.0153	0.4059		2b
rs73155300	22:18918208	T/C	PRODH	intron	0.884	0.98452	0.0163	0.3387		4
rs73157203	22:18923340	T/C	PRODH	intron	0.829	0.99501	0.0246	0.84		5
rs73157204	22:18923987	C/G	PRODH	near-gene-5,untranslated-5	0.853	1.03272	0.0205	0.1166		2b
rs80101553	22:18921297	C/G	PRODH	intron	0.885	1.01400	0.0133	0.2987		5
rs8137125	22:18923183	T/G	PRODH	intron	0.867	0.97795	0.0181	0.2181		5
rs8137736	22:18918937	C/G	PRODH	intron	0.902	1.00110	0.0115	0.9232		2b
rs9604910	22:18919899	A/T	PRODH	intron	0.889	1.00371	0.0115	0.7454		4
rs9605901	22:18906630	T/C	PRODH	intron	0.710	0.99940	0.0285	0.9838		5
rs9618419	22:18907405	T/G	PRODH	intron	0.882	1.01056	0.0153	0.4958		5
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

Reference	Study type	Sample size
18668038	GWAS	3391 cases; 3181 controls
18511947	GWAS	359 cases; 718 controls
21489405	GWAS	834 cases; 672 controls
19181681	GWAS	471 cases; 2792 controls
Reference	Study type	Sample size

eQTL Information