PPP3CC

Basic Information

Gene Symbol	PPP3CC
Entrez Id	5533
Position	chr8:22298596..22398638
Description	protein phosphatase 3, catalytic subunit, gamma isozyme
Gene type	protein-codingNA3; CALNA3; PP2Bgamma

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10089838	8:22306052	T/C	PPP3CC	intron	0.982	1.00381	0.0219	0.864		7
rs10096012	8:22303439	A/G	PPP3CC	intron	0.983	1.00582	0.0232	0.8037		7
rs10099515	8:22304173	A/G	PPP3CC	intron	0.902	1.02819	0.0112	0.01298		5
rs10108011	8:22320806	A/G	PPP3CC	intron	0.996	0.98138	0.0107	0.07763		1f
rs10108972	8:22306091	A/C	PPP3CC	intron	0.967	0.99302	0.0219	0.7477		7
rs10110254	8:22309551	T/G	PPP3CC	intron	0.986	0.96802	0.0106	0.002274		6
rs1075534	8:22374074	A/G	PPP3CC	intron	1.000	1.03417	0.0105	0.001451		1b
rs112259977	8:22308410	A/G	PPP3CC	intron	0.681	0.95209	0.0484	0.3107		6
rs113384196	8:22379472	A/G	PPP3CC	intron	0.753	1.04770	0.0686	0.4967		6
rs113521978	8:22336017	A/G	PPP3CC	intron	0.626	0.94422	0.0482	0.2345		6
rs116911631	8:22377989	T/C	PPP3CC	intron	0.692	1.12626	0.0632	0.05975		5
rs116968878	8:22319142	A/C	PPP3CC	intron	0.961	0.99045	0.0240	0.6898		5
rs117089909	8:22313556	T/C	PPP3CC	intron	0.611	1.12975	0.0741	0.09945		4
rs117140519	8:22355072	A/C	PPP3CC	intron	0.855	1.03614	0.0232	0.1259		7
rs117402166	8:22365791	A/G	PPP3CC	intron,near-gene-3	0.816	0.97453	0.0339	0.4458		6
rs117651588	8:22319935	A/G	PPP3CC	intron	0.695	1.02737	0.0457	0.5553		4
rs117666530	8:22365185	A/C	PPP3CC	intron	0.816	1.02624	0.0339	0.4445		7
rs11782960	8:22308644	A/G	PPP3CC	intron	0.932	1.01217	0.0110	0.2711		7
rs117836519	8:22310973	T/C	PPP3CC	intron	0.837	0.98216	0.0611	0.7679		3a
rs117993834	8:22398155	A/G	PPP3CC	ncRNA,missense	0.732	1.01979	0.0539	0.7164		4
rs118143711	8:22361072	A/G	PPP3CC	intron	0.780	1.01928	0.0369	0.605		7
rs11992035	8:22301123	A/G	PPP3CC	intron	0.985	1.00361	0.0219	0.8689		5
rs12056852	8:22351008	A/G	PPP3CC	intron	0.613	0.87511	0.0454	0.003292		6
rs12334963	8:22312427	A/G	PPP3CC	intron	0.969	0.98926	0.0239	0.6499		7
rs12544074	8:22338378	A/G	PPP3CC	intron	0.998	1.03097	0.0106	0.003928		7
rs12544288	8:22333342	A/T	PPP3CC	intron	0.933	1.00511	0.0239	0.8323		6
rs12545909	8:22310052	A/G	PPP3CC	intron	0.994	0.96676	0.0106	0.001445		1f
rs13271367	8:22324577	A/G	PPP3CC	intron	0.981	1.03004	0.0107	0.005911		5
rs13271691	8:22324682	A/G	PPP3CC	intron	0.978	1.03076	0.0108	0.005001		7
rs13277146	8:22334905	A/G	PPP3CC	intron	0.920	1.01715	0.0167	0.309		7
rs13282433	8:22344999	A/G	PPP3CC	intron	0.682	0.95094	0.0563	0.3714		7
rs140176912	8:22373514	T/C	PPP3CC	intron	0.680	1.10241	0.0668	0.1445		-
rs142667722	8:22391827	A/T	PPP3CC	intron	0.751	1.07853	0.0637	0.2355		-
rs142831450	8:22361731	T/C	PPP3CC	intron	0.739	0.99342	0.0485	0.8918		-
rs143892013	8:22335852	A/G	PPP3CC	intron	0.763	0.95715	0.0456	0.337		-
rs144161623	8:22322591	T/C	PPP3CC	intron	0.773	1.06332	0.0495	0.2146		-
rs144164010	8:22314319	T/C	PPP3CC	intron	0.827	0.98857	0.0552	0.8351		-
rs145180005	8:22343016	A/G	PPP3CC	intron	0.821	0.96435	0.0479	0.4489		-
rs150713790	8:22367437	A/G	PPP3CC	intron	0.973	1.03987	0.0175	0.02545		-
rs150977635	8:22321349	T/G	PPP3CC	intron	0.809	1.06279	0.0320	0.05715		-
rs151232898	8:22383296	T/C	PPP3CC	intron	0.824	0.95993	0.0479	0.3934		-
rs1522248	8:22299924	A/G	PPP3CC	intron	0.983	0.99322	0.0220	0.7583		5
rs1530874	8:22347777	C/G	PPP3CC	intron	0.998	0.96889	0.0106	0.002803		5
rs1600877	8:22378118	T/C	PPP3CC	intron	1.000	0.96686	0.0105	0.001347		5
rs17060857	8:22297849	A/C	PPP3CC	near-gene-5	0.990	0.98847	0.0239	0.6274		4
rs17060900	8:22388897	C/G	PPP3CC	intron	0.846	0.98501	0.0242	0.5331		7
rs17670914	8:22367960	A/C	PPP3CC	intron	0.699	1.05823	0.0612	0.3547		7
rs17671456	8:22385077	C/G	PPP3CC	intron	0.834	1.01390	0.0173	0.4264		6
rs17733133	8:22385061	T/C	PPP3CC	intron	0.906	0.96618	0.0173	0.04645		7
rs17733242	8:22385545	A/G	PPP3CC	intron	0.988	0.95868	0.0171	0.01367		6
rs17733355	8:22388857	A/G	PPP3CC	intron	1.000	1.04865	0.0172	0.005706		7
rs186409588	8:22312493	T/C	PPP3CC	intron	0.761	0.99910	0.0356	0.9793		-
rs187260884	8:22314520	T/C	PPP3CC	intron	0.648	0.98936	0.0307	0.7283		-
rs192310024	8:22390809	C/G	PPP3CC	intron	0.871	0.98620	0.0635	0.8271		-
rs2100291	8:22374551	T/C	PPP3CC	intron	1.010	0.96705	0.0105	0.00144		5
rs2122878	8:22311916	T/C	PPP3CC	intron	0.992	1.03345	0.0106	0.00192		6
rs2122880	8:22375042	A/C	PPP3CC	intron	0.899	0.96165	0.0113	0.0005498		6
rs2272080	8:22298726	T/G	PPP3CC	ncRNA,untranslated-5	0.943	0.99740	0.0215	0.9043		4
rs2272081	8:22298627	A/C	PPP3CC	ncRNA,untranslated-5	0.893	0.97443	0.0218	0.236		4
rs2404237	8:22312429	T/C	PPP3CC	intron	0.986	0.96793	0.0106	0.002184		7
rs2443494	8:22372262	C/G	PPP3CC	intron	1.000	1.03365	0.0105	0.00167		6
rs2443495	8:22372166	T/G	PPP3CC	intron	0.742	1.01491	0.0178	0.4055		6
rs2443496	8:22365788	A/G	PPP3CC	intron,near-gene-3	0.984	0.96744	0.0107	0.001905		6
rs2443497	8:22364183	A/C	PPP3CC	intron	0.958	1.03128	0.0109	0.00481		7
rs2443498	8:22362574	T/C	PPP3CC	intron	0.958	1.03283	0.0108	0.00274		6
rs2443499	8:22356381	T/C	PPP3CC	intron	0.875	0.97716	0.0126	0.06641		7
rs2443500	8:22352342	T/C	PPP3CC	intron	0.991	0.96880	0.0106	0.002762		6
rs2443501	8:22339510	A/G	PPP3CC	intron	0.982	0.96967	0.0107	0.00384		7
rs2443502	8:22340499	A/G	PPP3CC	intron	1.000	0.96899	0.0106	0.002831		7
rs2443503	8:22381850	A/G	PPP3CC	intron	0.996	1.03386	0.0106	0.001621		5
rs2443504	8:22377019	A/G	PPP3CC	intron	0.930	0.96050	0.0114	0.0003893		7
rs2443505	8:22375341	A/G	PPP3CC	intron	1.000	0.96686	0.0105	0.001363		6
rs2443506	8:22373383	T/C	PPP3CC	intron	1.000	1.03469	0.0105	0.001197		6
rs2443507	8:22373231	A/G	PPP3CC	intron	1.000	0.96744	0.0105	0.001667		7
rs2449328	8:22375043	A/G	PPP3CC	intron	0.897	1.04039	0.0113	0.0004785		6
rs2449329	8:22374794	T/G	PPP3CC	intron	1.010	0.96676	0.0105	0.001331		7
rs2449337	8:22370492	C/G	PPP3CC	intron	0.998	0.96802	0.0106	0.002133		6
rs2449338	8:22369232	A/G	PPP3CC	intron,near-gene-5	1.000	1.03324	0.0105	0.001904		6
rs2449339	8:22387981	A/G	PPP3CC	intron	1.000	0.96831	0.0106	0.002308		6
rs2449340	8:22389900	T/G	PPP3CC	intron	0.996	1.03159	0.0106	0.003376		6
rs2449341	8:22390937	A/C	PPP3CC	intron	0.998	0.96822	0.0106	0.002194		7
rs2449342	8:22364411	T/C	PPP3CC	intron	0.996	0.96986	0.0106	0.003782		6
rs2449343	8:22362679	A/C	PPP3CC	intron	0.996	1.03045	0.0106	0.004548		6
rs2449348	8:22359572	T/C	PPP3CC	intron	1.000	0.96977	0.0105	0.003644		6
rs2449349	8:22383284	A/G	PPP3CC	intron	1.000	1.03376	0.0105	0.001658		7
rs2449350	8:22383182	A/C	PPP3CC	intron	0.996	0.96667	0.0106	0.001349		7
rs2461477	8:22378314	A/G	PPP3CC	intron	1.000	1.03376	0.0105	0.001609		6
rs2461478	8:22378236	A/G	PPP3CC	intron	1.000	1.03376	0.0105	0.001606		5
rs2461480	8:22381839	T/C	PPP3CC	intron	1.000	0.96793	0.0105	0.001957		5
rs2461481	8:22382780	A/G	PPP3CC	intron	1.000	0.96725	0.0105	0.001563		6
rs2461482	8:22382898	T/C	PPP3CC	intron	1.000	0.96764	0.0105	0.00182		6
rs2461483	8:22386479	T/C	PPP3CC	intron	0.998	0.96764	0.0106	0.001848		7
rs2461485	8:22388330	T/C	PPP3CC	intron	0.990	0.96735	0.0106	0.001742		6
rs2461486	8:22392008	T/C	PPP3CC	intron	0.996	1.03272	0.0106	0.00229		7
rs2461488	8:22371858	A/G	PPP3CC	intron	1.010	0.96860	0.0105	0.002501		6
rs2461489	8:22370253	A/G	PPP3CC	intron	1.000	0.96831	0.0105	0.002225		7
rs2461490	8:22370115	C/G	PPP3CC	intron,near-gene-5	1.000	0.97025	0.0106	0.004212		5
rs2461491	8:22361252	A/G	PPP3CC	intron	1.000	1.03200	0.0105	0.002788		6
rs2461493	8:22353569	T/C	PPP3CC	intron	0.980	1.03138	0.0107	0.003782		6
rs2461494	8:22349511	A/G	PPP3CC	intron	0.955	1.00050	0.0166	0.9762		7
rs2469745	8:22343464	T/C	PPP3CC	intron	0.999	0.96928	0.0106	0.00311		6
rs2469746	8:22353603	C/G	PPP3CC	intron	0.980	0.96899	0.0107	0.003085		6
rs2469747	8:22355313	A/G	PPP3CC	intron	0.987	0.96793	0.0106	0.002081		7
rs2469748	8:22356884	A/G	PPP3CC	intron	0.844	0.96686	0.0117	0.004027		7
rs2469749	8:22357598	T/C	PPP3CC	intron	0.962	1.03345	0.0112	0.003163		6
rs2469751	8:22393464	C/G	PPP3CC	intron	0.947	0.96715	0.0109	0.002236		6
rs2469752	8:22387087	T/C	PPP3CC	intron	1.000	0.96725	0.0105	0.001574		7
rs2469753	8:22383225	T/C	PPP3CC	intron	1.000	1.03365	0.0105	0.00168		7
rs2469755	8:22360212	A/G	PPP3CC	intron	1.000	0.96851	0.0106	0.002445		7
rs2469756	8:22360423	A/G	PPP3CC	intron	1.000	0.96909	0.0106	0.002984		7
rs2469757	8:22360938	T/C	PPP3CC	intron	1.000	0.96880	0.0105	0.002624		6
rs2469758	8:22363032	T/C	PPP3CC	intron	0.993	0.97045	0.0106	0.004563		7
rs2469759	8:22364376	A/T	PPP3CC	intron	0.978	1.03345	0.0107	0.002029		7
rs2469760	8:22365945	A/G	PPP3CC	intron,ncRNA	1.000	1.03035	0.0105	0.004496		6
rs2469761	8:22367274	A/G	PPP3CC	intron	0.998	1.03210	0.0105	0.002729		6
rs2469768	8:22381362	A/G	PPP3CC	intron	1.000	0.96764	0.0105	0.001787		6
rs2469770	8:22379856	A/G	PPP3CC	intron	1.000	0.96841	0.0105	0.002342		7
rs2469771	8:22376627	T/C	PPP3CC	intron	1.000	1.03438	0.0105	0.001325		7
rs2469772	8:22376230	C/G	PPP3CC	intron	1.000	1.03458	0.0105	0.001266		7
rs2469775	8:22373238	T/C	PPP3CC	intron	1.000	1.03469	0.0105	0.001213		7
rs28511282	8:22315849	A/G	PPP3CC	intron	0.955	0.99760	0.0238	0.9208		7
rs28513286	8:22298801	C/G	PPP3CC	ncRNA,untranslated-5	0.944	1.01390	0.0235	0.5572		4
rs28546543	8:22314872	A/C	PPP3CC	intron	0.984	1.03200	0.0107	0.003167		6
rs28654839	8:22299221	A/T	PPP3CC	intron	0.987	0.99461	0.0225	0.8091		4
rs28757371	8:22340009	C/G	PPP3CC	intron	0.919	1.00733	0.0240	0.7597		7
rs28764005	8:22390288	A/T	PPP3CC	intron	0.730	1.04707	0.0425	0.2789		7
rs2948145	8:22367792	T/C	PPP3CC	intron	0.999	1.03076	0.0106	0.004134		6
rs2979302	8:22359156	A/G	PPP3CC	intron	1.000	0.96909	0.0106	0.002965		7
rs34649162	8:22314730	T/C	PPP3CC	intron	0.993	1.03283	0.0106	0.00237		6
rs4871998	8:22308150	A/T	PPP3CC	intron	0.974	1.02994	0.0107	0.00599		1f
rs4871999	8:22325833	A/G	PPP3CC	intron	0.989	1.03045	0.0106	0.004731		7
rs4872000	8:22337323	T/G	PPP3CC	intron	1.000	0.96957	0.0106	0.003447		7
rs4872504	8:22326717	A/G	PPP3CC	intron	0.997	1.03200	0.0106	0.002942		6
rs4872505	8:22337996	A/T	PPP3CC	intron	0.977	1.03107	0.0107	0.004268		6
rs62492583	8:22331943	T/G	PPP3CC	intron	0.774	1.03686	0.0225	0.1074		5
rs6984908	8:22316901	T/C	PPP3CC	intron	0.994	0.96812	0.0106	0.002254		6
rs6993341	8:22310933	T/C	PPP3CC	intron	0.992	1.03427	0.0106	0.001525		4
rs6996872	8:22316753	T/C	PPP3CC	intron	0.995	1.03252	0.0106	0.002531		7
rs6997299	8:22324268	T/C	PPP3CC	intron	0.997	1.03169	0.0106	0.00322		6
rs7007673	8:22316687	T/G	PPP3CC	intron	0.994	0.96870	0.0106	0.002718		6
rs7012734	8:22330328	T/C	PPP3CC	intron	0.868	0.94781	0.0250	0.03184		5
rs71513885	8:22342607	A/G	PPP3CC	intron	0.723	1.06173	0.0226	0.008187		4
rs71513887	8:22369951	A/G	PPP3CC	intron,near-gene-5	0.723	0.96098	0.0519	0.443		7
rs73227858	8:22303086	T/C	PPP3CC	intron	0.849	1.04959	0.0201	0.0163		6
rs73227869	8:22326349	T/C	PPP3CC	intron	0.789	0.98955	0.0415	0.8002		4
rs73227871	8:22331874	T/G	PPP3CC	intron	0.900	0.99790	0.0149	0.8878		4
rs73227894	8:22393756	T/C	PPP3CC	intron	0.803	1.03697	0.0258	0.1593		7
rs75569939	8:22385961	A/C	PPP3CC	intron	0.921	0.94299	0.0578	0.31		7
rs76091028	8:22375862	C/G	PPP3CC	intron	0.728	0.96474	0.0336	0.2854		6
rs76564756	8:22318032	T/C	PPP3CC	intron	0.880	0.96715	0.0364	0.3579		6
rs76660160	8:22327027	A/G	PPP3CC	intron	0.913	0.98442	0.0150	0.2966		5
rs77969181	8:22362386	A/C	PPP3CC	intron	0.777	0.99005	0.0350	0.7754		7
rs78116854	8:22312177	T/G	PPP3CC	intron	0.608	1.14339	0.0681	0.04903		7
rs7827093	8:22334610	T/C	PPP3CC	intron	1.000	1.03035	0.0105	0.004459		6
rs7831649	8:22298494	A/G	PPP3CC	ncRNA,untranslated-5	0.972	0.99780	0.0226	0.9206		2b
rs79123430	8:22334719	A/G	PPP3CC	intron	0.823	0.95734	0.0272	0.1095		7
rs79576325	8:22395465	A/G	PPP3CC	intron	0.765	0.99134	0.0352	0.8049		5
rs79829794	8:22352074	A/G	PPP3CC	intron	0.820	1.03811	0.0479	0.4351		6
rs896379	8:22374200	A/G	PPP3CC	intron	1.010	0.96889	0.0105	0.002686		1f
rs9785086	8:22301962	A/T	PPP3CC	intron	0.986	1.00391	0.0219	0.8589		5
rs9785088	8:22302273	A/G	PPP3CC	intron	0.986	1.00361	0.0219	0.8703		5
rs9785089	8:22302313	A/G	PPP3CC	intron	0.988	1.00190	0.0219	0.9316		5
rs9886589	8:22298839	A/G	PPP3CC	ncRNA,untranslated-5	0.964	1.01106	0.0223	0.6221		4
rs9886594	8:22298472	T/G	PPP3CC	near-gene-5	0.988	1.00582	0.0225	0.7975		4
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information