Gene Symbol | PPP1R3A |
---|---|
Entrez Id | 5506 |
Position | chr7:113516882..113559082 |
Description | protein phosphatase 1 regulatory subunit 3A |
Gene type | protein-coding |
SNP | Position | Alelle | Gene | Annotation | Info | Or | Se | P-value | eQTL | Score* |
---|---|---|---|---|---|---|---|---|---|---|
rs10226417 | 7:113554357 | T/C | PPP1R3A | intron | 0.983 | 0.96996 | 0.0263 | 0.2463 | ![]() | 7 |
rs10227142 | 7:113534005 | T/C | PPP1R3A | intron | 0.985 | 1.02912 | 0.0262 | 0.2741 | ![]() | 6 |
rs10228303 | 7:113528961 | T/C | PPP1R3A | intron | 0.992 | 0.98255 | 0.0113 | 0.1193 | ![]() | 6 |
rs10231419 | 7:113534995 | T/G | PPP1R3A | intron | 0.991 | 0.98118 | 0.0113 | 0.0918 | ![]() | 7 |
rs10250492 | 7:113535587 | A/T | PPP1R3A | intron | 0.975 | 0.98649 | 0.0113 | 0.2266 | ![]() | 7 |
rs10272011 | 7:113550243 | T/C | PPP1R3A | intron | 0.983 | 1.03045 | 0.0263 | 0.2532 | ![]() | 6 |
rs116865924 | 7:113535129 | T/C | PPP1R3A | intron | 0.610 | 0.90303 | 0.0384 | 0.007887 | ![]() | 6 |
rs117054546 | 7:113553407 | T/C | PPP1R3A | intron | 0.626 | 0.97981 | 0.0547 | 0.7092 | ![]() | 7 |
rs118134869 | 7:113550091 | A/G | PPP1R3A | intron | 0.833 | 0.95849 | 0.0578 | 0.4631 | ![]() | 7 |
rs118137751 | 7:113537793 | A/G | PPP1R3A | intron | 0.929 | 1.06567 | 0.0256 | 0.0128 | ![]() | 5 |
SNP | Position | Alelle | Gene | Annotation | Info | Or | Se | P-value | eQTL | Score* |
score | supporting data | score | supporting data |
---|---|---|---|
1a | eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak | 6 | other |
2a | TF binding + matched TF motif + matched DNase Footprint + DNase peak | 5 | TF binding or DNase peak |
1b | eQTL + TF binding + any motif + DNase Footprint + DNase peak | 4 | TF binding + DNase peak |
2b | TF binding + any motif + DNase Footprint + DNase peak | 3b | TF binding + matched TF motif |
1c | eQTL + TF binding + matched TF motif + DNase peak | 1f | eQTL + TF binding / DNase peak |
2c | TF binding + matched TF motif + DNase peak | 3a | TF binding + any motif + DNase peak |
1d | eQTL + TF binding + any motif + DNase peak | 1e | eQTL + TF binding + matched TF motif |
The gene is not affected by CNV!