PODXL

Basic Information

Gene Symbol	PODXL
Entrez Id	5420
Position	chr7:131185021..131241376
Description	podocalyxin-like
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs1007340	7:131235626	A/G	PODXL	intron	0.850	1.03884	0.0263	0.1471		5
rs1013368	7:131200639	T/C	PODXL	intron	0.997	0.99591	0.0110	0.7057		6
rs10224884	7:131203636	T/C	PODXL	intron	0.982	1.00230	0.0108	0.8331		4
rs10235009	7:131233255	A/G	PODXL	intron	0.789	1.00864	0.0126	0.4919		5
rs10264841	7:131203424	T/C	PODXL	intron	0.996	1.00652	0.0186	0.7272		7
rs10268420	7:131203755	A/G	PODXL	intron	0.991	1.00632	0.0187	0.7349		3a
rs10273876	7:131222808	A/G	PODXL	intron	0.841	1.00351	0.0115	0.7625		6
rs10279789	7:131232902	T/C	PODXL	intron	0.780	1.00864	0.0126	0.4973		5
rs1030145	7:131232508	A/T	PODXL	intron	0.750	1.03179	0.0184	0.0886		6
rs1030146	7:131230606	T/G	PODXL	intron	0.919	0.99223	0.0110	0.4823		5
rs10954318	7:131196808	A/G	PODXL	intron	0.990	1.01491	0.0145	0.3101		4
rs111558363	7:131211926	T/C	PODXL	intron	0.607	0.95935	0.0367	0.2575		7
rs111846205	7:131229308	T/C	PODXL	intron	0.817	1.00823	0.0237	0.7305		5
rs112350050	7:131197667	T/C	PODXL	intron	0.984	0.98787	0.0196	0.5325		6
rs112359711	7:131208470	T/G	PODXL	intron	0.951	0.98334	0.0198	0.3975		6
rs112712083	7:131225656	C/G	PODXL	intron	0.822	0.99164	0.0234	0.7198		2b
rs112877944	7:131195531	T/C	PODXL	intron	0.995	1.01542	0.0203	0.4495		7
rs112896122	7:131228588	T/C	PODXL	intron	0.646	0.96050	0.0466	0.3867		7
rs112969467	7:131202605	C/G	PODXL	intron	0.992	1.01806	0.0203	0.3778		5
rs113049225	7:131190275	A/G	PODXL	intron	0.956	0.98639	0.0156	0.3803		7
rs113189864	7:131224841	A/C	PODXL	intron	0.822	1.00813	0.0234	0.7293		6
rs113326594	7:131206257	T/C	PODXL	intron	0.954	0.98778	0.0217	0.5701		7
rs113382424	7:131188771	A/G	PODXL	untranslated-3	0.999	1.01511	0.0203	0.4587		5
rs113556045	7:131228516	A/C	PODXL	intron	0.822	1.00763	0.0236	0.7481		6
rs116775512	7:131235242	T/C	PODXL	intron	0.840	0.96957	0.0275	0.2622		7
rs117263618	7:131239552	T/C	PODXL	intron	0.839	1.02419	0.0409	0.5596		5
rs117489418	7:131188029	C/G	PODXL	untranslated-3	0.699	1.04227	0.0468	0.3762		5
rs117548395	7:131232095	A/G	PODXL	intron	0.784	1.03790	0.0287	0.1941		6
rs11763366	7:131236868	T/G	PODXL	intron	0.948	1.00914	0.0134	0.4976		5
rs117779396	7:131232023	T/C	PODXL	intron	0.738	1.04886	0.0379	0.2087		7
rs117840222	7:131232299	A/G	PODXL	intron	0.785	0.96339	0.0280	0.1827		7
rs117871875	7:131220492	C/G	PODXL	intron	0.811	1.05538	0.0491	0.2724		2b
rs118088522	7:131237151	C/G	PODXL	intron	0.853	1.03045	0.0274	0.2738		5
rs11974385	7:131211001	A/G	PODXL	intron	0.967	0.98728	0.0209	0.5397		4
rs11977917	7:131213110	A/G	PODXL	intron	0.957	1.01096	0.0210	0.602		6
rs11979439	7:131196604	T/C	PODXL	intron	0.990	0.98551	0.0145	0.317		5
rs12113630	7:131234808	C/G	PODXL	intron	0.836	1.03138	0.0276	0.2623		6
rs12155058	7:131227556	T/C	PODXL	intron	0.626	0.99452	0.0636	0.9315		5
rs12540002	7:131236420	C/G	PODXL	intron	0.837	0.99173	0.0117	0.4771		7
rs12540046	7:131200726	T/C	PODXL	intron	0.997	0.98196	0.0203	0.3699		7
rs12666248	7:131238092	C/G	PODXL	intron	0.917	1.00803	0.0136	0.5561		5
rs12667410	7:131239744	T/C	PODXL	intron	0.924	0.98689	0.0125	0.2938		5
rs12667509	7:131210113	T/C	PODXL	intron	0.919	1.01308	0.0117	0.2662		6
rs12670788	7:131195712	A/G	PODXL	missense	0.983	1.00743	0.0106	0.4867		7
rs12706977	7:131213818	T/C	PODXL	intron	0.901	1.01308	0.0118	0.2704		6
rs13236463	7:131222085	T/C	PODXL	intron	0.858	1.00190	0.0121	0.8779		6
rs13245368	7:131219337	T/C	PODXL	intron	0.861	1.02963	0.0254	0.2503		5
rs13247975	7:131224997	A/G	PODXL	intron	0.881	1.00652	0.0128	0.6121		7
rs13308125	7:131207827	T/C	PODXL	intron	0.930	0.98462	0.0116	0.1826		5
rs141652944	7:131241786	T/C	PODXL	near-gene-5	0.858	0.97453	0.0273	0.3454		-
rs144155705	7:131215899	T/C	PODXL	intron	0.609	0.98778	0.0517	0.8118		-
rs144974340	7:131210240	A/G	PODXL	intron	0.894	0.97317	0.0229	0.2343		-
rs145645706	7:131225460	A/G	PODXL	intron	0.842	1.00050	0.0554	0.9932		-
rs149634242	7:131217151	T/C	PODXL	intron	0.800	0.98600	0.0252	0.5764		-
rs150085704	7:131212775	A/G	PODXL	intron	0.678	1.03272	0.0452	0.4764		-
rs1559021	7:131235399	A/C	PODXL	intron	0.724	0.97307	0.0184	0.1389		7
rs1559022	7:131235396	A/G	PODXL	intron	0.719	0.97502	0.0184	0.1683		7
rs1615131	7:131240373	T/C	PODXL	intron	0.979	0.99930	0.0121	0.9562		5
rs1619267	7:131221194	A/G	PODXL	intron	0.882	1.00050	0.0113	0.9655		7
rs1625957	7:131212431	A/C	PODXL	intron	0.981	1.00270	0.0185	0.8848		5
rs1643251	7:131229768	A/T	PODXL	intron	0.897	0.98857	0.0113	0.306		4
rs1643256	7:131218957	T/C	PODXL	intron	0.889	1.01440	0.0273	0.602		5
rs1643257	7:131239009	T/C	PODXL	intron	0.972	0.99651	0.0121	0.7758		5
rs1643258	7:131215663	A/C	PODXL	intron	0.870	1.01066	0.0270	0.6952		6
rs1643263	7:131201814	T/C	PODXL	intron	0.999	1.00471	0.0187	0.7995		6
rs1643264	7:131191790	A/G	PODXL	intron	0.999	0.98659	0.0201	0.5027		7
rs1648445	7:131191761	A/C	PODXL	intron	0.999	0.98620	0.0201	0.4909		6
rs1733854	7:131201095	T/C	PODXL	intron	0.846	0.99114	0.0175	0.6091		5
rs1733859	7:131193485	T/C	PODXL	intron	0.979	1.01035	0.0145	0.4779		6
rs1733860	7:131185995	A/C	PODXL	untranslated-3	0.984	1.00341	0.0108	0.7524		6
rs1733865	7:131197784	T/C	PODXL	intron	0.998	0.99990	0.0107	0.9889		6
rs1733866	7:131198028	T/C	PODXL	intron	0.990	1.01056	0.0144	0.4628		5
rs1733872	7:131210572	T/C	PODXL	intron	0.977	1.00220	0.0186	0.9068		5
rs1733874	7:131224410	A/G	PODXL	intron	0.897	1.00833	0.0113	0.4593		5
rs1733875	7:131219525	A/G	PODXL	intron	0.879	1.01217	0.0276	0.6619		7
rs17744792	7:131196062	T/C	PODXL	coding-synon	0.985	0.98738	0.0146	0.3864		5
rs181075297	7:131187243	A/G	PODXL	untranslated-3	0.880	0.88232	0.0607	0.03928		-
rs185145446	7:131230986	A/G	PODXL	intron	0.659	0.96773	0.0677	0.6274		-
rs188942903	7:131236620	T/C	PODXL	intron	0.753	0.97609	0.0622	0.6975		-
rs192298457	7:131219144	A/G	PODXL	intron	0.835	0.99710	0.0474	0.9519		-
rs2398790	7:131216888	A/C	PODXL	intron	0.666	0.98334	0.0144	0.2427		6
rs2398791	7:131217034	A/G	PODXL	intron	0.870	0.99213	0.0120	0.5083		6
rs2398792	7:131217402	A/G	PODXL	intron	0.859	1.01167	0.0186	0.5315		6
rs2398793	7:131222935	T/C	PODXL	intron	0.826	0.99581	0.0117	0.7207		7
rs2398795	7:131233690	T/C	PODXL	intron	0.919	0.99461	0.0138	0.6956		6
rs2433294	7:131199903	C/G	PODXL	intron	0.990	0.98837	0.0144	0.4166		5
rs28446476	7:131224864	T/C	PODXL	intron	0.865	1.00692	0.0171	0.6867		7
rs3212295	7:131194392	A/G	PODXL	intron	0.978	0.98906	0.0150	0.4629		7
rs3212298	7:131193739	T/C	PODXL	missense	0.934	0.97365	0.0232	0.2514		5
rs3212299	7:131193695	A/C	PODXL	intron	0.935	0.97550	0.0229	0.2785		5
rs3212300	7:131191461	A/G	PODXL	coding-synon	1.000	1.01725	0.0203	0.3974		4
rs3212303	7:131191536	A/G	PODXL	intron	0.966	1.00894	0.0109	0.4161		2b
rs35287817	7:131205697	T/C	PODXL	intron	0.972	0.98413	0.0206	0.4356		7
rs35706199	7:131191874	T/C	PODXL	intron	0.750	1.00351	0.0495	0.9432		7
rs35893129	7:131194255	C/G	PODXL	missense	0.993	0.98560	0.0203	0.4761		5
rs35975087	7:131209882	T/C	PODXL	intron	0.689	1.00582	0.0568	0.9183		6
rs3800684	7:131192213	C/G	PODXL	intron	0.972	1.01390	0.0110	0.2089		7
rs3800688	7:131192475	A/G	PODXL	intron	0.984	0.98432	0.0111	0.1546		7
rs3823484	7:131242576	A/G	PODXL	near-gene-5	0.730	0.99740	0.0147	0.8593		2b
rs3847113	7:131195535	T/G	PODXL	intron	0.981	1.00813	0.0106	0.4495		7
rs4731799	7:131198175	A/G	PODXL	intron	0.988	1.00743	0.0106	0.4864		5
rs4988704	7:131216891	A/C	PODXL	intron	0.693	0.96822	0.0137	0.01847		6
rs58327209	7:131217513	T/C	PODXL	intron	0.828	1.02953	0.0241	0.2274		7
rs58421509	7:131196384	T/C	PODXL	intron	0.931	1.03107	0.0232	0.1881		6
rs58781769	7:131225262	A/G	PODXL	intron	0.866	1.00763	0.0171	0.6557		5
rs62468110	7:131207007	T/C	PODXL	intron	0.721	1.06109	0.0559	0.2887		3a
rs62468113	7:131225165	C/G	PODXL	intron	0.812	1.00622	0.0147	0.6746		5
rs6467374	7:131224235	A/G	PODXL	intron	0.866	0.99322	0.0171	0.6907		7
rs6467375	7:131232086	T/C	PODXL	intron	0.736	1.00682	0.0134	0.6119		6
rs6467376	7:131234434	T/C	PODXL	intron	0.857	0.99352	0.0139	0.6388		6
rs6942947	7:131219171	T/C	PODXL	intron	0.821	1.02778	0.0244	0.2609		5
rs6953894	7:131223177	A/G	PODXL	intron	0.977	1.00190	0.0111	0.8604		2b
rs6968458	7:131208490	A/G	PODXL	intron	0.853	1.01329	0.0210	0.5293		7
rs6968481	7:131208542	A/G	PODXL	intron	0.853	1.01329	0.0210	0.5287		6
rs73157520	7:131193013	T/G	PODXL	intron	0.986	1.00582	0.0190	0.7622		2b
rs73157523	7:131196206	T/C	PODXL	intron	0.990	1.01501	0.0145	0.3065		5
rs73157524	7:131196591	A/G	PODXL	intron	0.990	1.01471	0.0145	0.3155		5
rs73490866	7:131195162	T/C	PODXL	intron	0.942	1.00884	0.0109	0.4194		6
rs73722842	7:131198061	A/G	PODXL	intron	0.994	1.01664	0.0204	0.4187		5
rs73722846	7:131202240	A/G	PODXL	intron	0.986	1.01410	0.0206	0.4952		5
rs73722847	7:131203579	A/G	PODXL	intron	0.969	0.98344	0.0206	0.4183		4
rs73722855	7:131214075	A/G	PODXL	intron	0.949	0.98876	0.0212	0.5941		5
rs73722857	7:131231645	T/C	PODXL	intron	0.679	0.98089	0.0270	0.4742		4
rs74848060	7:131209168	A/G	PODXL	intron	0.933	1.01410	0.0202	0.4904		5
rs74954963	7:131202487	A/G	PODXL	intron	0.974	1.01035	0.0204	0.6144		4
rs75301874	7:131239100	T/C	PODXL	intron	0.625	1.04770	0.0558	0.4035		5
rs75987569	7:131236839	A/G	PODXL	intron	0.846	1.02603	0.0271	0.3436		5
rs76601231	7:131230856	T/C	PODXL	intron	0.754	0.96117	0.0434	0.3613		4
rs76928461	7:131218119	T/C	PODXL	intron	0.828	1.02953	0.0242	0.2291		5
rs77114770	7:131211086	A/C	PODXL	intron	0.951	1.01684	0.0199	0.3993		5
rs77131837	7:131231523	T/C	PODXL	intron	0.700	0.99352	0.0244	0.7902		4
rs77272058	7:131231613	C/G	PODXL	intron	0.607	0.95228	0.0321	0.1277		4
rs77580680	7:131191013	A/G	PODXL	intron	0.958	0.99970	0.0190	0.9884		5
rs7781498	7:131221613	A/G	PODXL	intron	0.784	0.97736	0.0248	0.3546		5
rs7790992	7:131206262	A/G	PODXL	intron	0.963	1.01207	0.0127	0.345		6
rs78519767	7:131193138	T/C	PODXL	intron	0.953	1.01593	0.0185	0.3933		5
rs78887165	7:131190482	A/G	PODXL	intron	0.949	0.99253	0.0227	0.7422		7
rs78928874	7:131185522	T/C	PODXL	untranslated-3	0.786	1.08719	0.0544	0.1243		5
rs79618024	7:131222534	T/C	PODXL	intron	0.759	1.00010	0.0446	0.9973		2b
rs79618478	7:131212945	A/G	PODXL	intron	0.956	0.98896	0.0211	0.5989		7
rs80130775	7:131222652	T/C	PODXL	intron	0.820	1.03728	0.0364	0.3142		4
rs8232	7:131185394	T/C	PODXL	untranslated-3	0.967	1.00702	0.0222	0.7514		5
rs933637	7:131217277	T/G	PODXL	intron	0.687	0.97912	0.0210	0.3137		6
rs9649034	7:131212459	A/G	PODXL	intron	0.920	1.01501	0.0116	0.1992		5
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information