PLCH2

Basic Information

Gene Symbol	PLCH2
Entrez Id	9651
Position	chr1:2407754..2436964
Description	phospholipase C, eta 2
Gene type	protein-coding

SNP Information

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SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10449222	1:2376733	A/G	PLCH2	intron	0.703	1.05232	0.0214	0.01715		5
rs10752743	1:2383039	A/G	PLCH2	intron	0.825	0.93969	0.0118	1.393E-7		5
rs10752744	1:2420590	T/C	PLCH2	intron	0.869	0.99402	0.0132	0.6522		5
rs10797423	1:2358944	A/C	PLCH2	near-gene-5	0.748	0.98442	0.0132	0.2321		5
rs10797424	1:2362764	A/T	PLCH2	intron	0.811	1.00280	0.0127	0.8228		2b
rs10797425	1:2383756	A/G	PLCH2	intron	0.796	0.94242	0.0120	7.268E-7		5
rs10797426	1:2384108	T/C	PLCH2	intron	0.827	0.94064	0.0118	2.086E-7		5
rs10797428	1:2411451	A/G	PLCH2	intron	0.901	0.98738	0.0115	0.2693		5
rs10910072	1:2359251	T/G	PLCH2	near-gene-5	0.763	1.00200	0.0164	0.9046		5
rs10910073	1:2359862	A/C	PLCH2	near-gene-5	0.746	1.01582	0.0132	0.2368		4
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Showing 1 to 10 of 240 entries

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Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information