PLCB2

Basic Information

Gene Symbol	PLCB2
Entrez Id	5330
Position	chr15:40580098..40600174
Description	phospholipase C, beta 2
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs112040753	15:40573640	A/G	PLCB2	near-gene-3	0.886	1.10396	0.0488	0.04278		5
rs113000381	15:40579539	T/C	PLCB2	intron	0.887	1.10318	0.0485	0.04295		5
rs117658605	15:40583107	T/G	PLCB2	intron	0.932	1.04854	0.0130	0.0002714		5
rs117974299	15:40595770	T/C	PLCB2	intron	0.601	0.98275	0.0641	0.7857		6
rs12438880	15:40589460	C/G	PLCB2	intron	0.933	1.04666	0.0130	0.0004278		5
rs12439272	15:40584804	A/G	PLCB2	intron	0.953	0.98560	0.0133	0.2767		1f
rs146715298	15:40577262	A/G	PLCB2	intron,near-gene-3	0.735	1.06620	0.0491	0.1918		-
rs2229690	15:40590134	A/G	PLCB2	coding-synon,ncRNA	0.980	0.96628	0.0107	0.001393		5
rs2229691	15:40589002	A/G	PLCB2	coding-synon,ncRNA	0.911	1.01643	0.0127	0.1997		5
rs2290550	15:40584164	A/C	PLCB2	intron	0.884	0.94904	0.0142	0.0002214		5
rs2305645	15:40595565	T/C	PLCB2	intron	0.987	1.05475	0.0114	2.975E-6		5
rs2305646	15:40595474	A/C	PLCB2	intron	0.714	0.93894	0.0273	0.0213		5
rs2305648	15:40590265	C/G	PLCB2	intron	0.921	0.97844	0.0112	0.05129		7
rs2305649	15:40589830	A/G	PLCB2	intron	0.975	0.96242	0.0108	0.000374		5
rs2305650	15:40589218	C/G	PLCB2	intron	0.931	1.04844	0.0130	0.0002743		5
rs2412505	15:40577408	T/C	PLCB2	intron,near-gene-3	0.944	1.04144	0.0120	0.0007035		5
rs2412506	15:40583093	A/G	PLCB2	intron	0.723	0.88834	0.0632	0.06129		5
rs2898991	15:40596568	A/G	PLCB2	intron	0.993	0.94980	0.0109	2.243E-6		3a
rs3784397	15:40596844	T/C	PLCB2	intron	0.994	0.94942	0.0109	1.932E-6		5
rs3784398	15:40596866	T/C	PLCB2	intron	0.993	0.94942	0.0109	1.905E-6		4
rs3784399	15:40598294	T/C	PLCB2	intron	0.991	1.05548	0.0114	2.35E-6		7
rs41277676	15:40580654	A/G	PLCB2	intron,ncRNA,untranslated-3	0.904	0.96474	0.0249	0.1489		5
rs41277680	15:40589824	A/G	PLCB2	intron	0.606	0.98413	0.0417	0.7008		5
rs4244575	15:40596561	C/G	PLCB2	intron	0.899	1.01715	0.0128	0.1843		3a
rs4924445	15:40573413	A/G	PLCB2	near-gene-3	0.990	0.98098	0.0110	0.08121		5
rs4924450	15:40597229	A/G	PLCB2	intron	0.910	1.00572	0.0125	0.6509		7
rs4924451	15:40597388	T/C	PLCB2	intron	0.787	1.05274	0.0129	0.00006928		6
rs62021888	15:40583560	T/G	PLCB2	coding-synon,ncRNA	0.960	1.05517	0.0116	3.884E-6		4
rs72731483	15:40581933	A/G	PLCB2	intron	0.887	0.98314	0.0303	0.5735		2b
rs72731484	15:40582598	T/G	PLCB2	intron	0.905	0.96348	0.0253	0.1411		5
rs72731485	15:40588182	A/G	PLCB2	intron	0.914	1.03438	0.0245	0.168		5
rs72731486	15:40591255	A/G	PLCB2	intron	0.917	1.02696	0.0243	0.2738		5
rs72731487	15:40594845	A/G	PLCB2	intron	0.915	1.01339	0.0295	0.6531		5
rs72731496	15:40598964	T/C	PLCB2	intron	0.881	0.97297	0.0247	0.2665		5
rs75295219	15:40584923	T/C	PLCB2	intron	0.700	0.93857	0.0473	0.1802		5
rs76247836	15:40573250	A/T	PLCB2	near-gene-3	0.862	1.00702	0.0294	0.8122		5
rs78758977	15:40588326	A/G	PLCB2	intron	0.632	1.03190	0.0482	0.5146		5
rs79930917	15:40591901	A/G	PLCB2	intron	0.632	1.06897	0.0651	0.3059		7
rs8023550	15:40599296	C/G	PLCB2	intron	0.906	1.05264	0.0118	0.0000146		5
rs936209	15:40583458	A/G	PLCB2	intron	0.750	0.90141	0.0562	0.06485		4
rs936211	15:40582499	T/G	PLCB2	intron	0.931	0.95562	0.0129	0.0004155		5
rs936212	15:40581543	T/C	PLCB2	ncRNA,missense,untranslated-3	0.676	1.01969	0.0319	0.5416		5
rs936213	15:40581345	A/G	PLCB2	intron,near-gene-3	0.960	1.03521	0.0118	0.003377		5
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information