PDCD11

Basic Information

Gene Symbol	PDCD11
Entrez Id	22984
Position	chr10:105156412..105206019
Description	programmed cell death 11
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10786751	10:105157128	A/C	PDCD11	intron,near-gene-5	0.983	0.98128	0.0166	0.2538		5
rs10883863	10:105161879	A/G	PDCD11	intron	0.999	1.02204	0.0105	0.03879		6
rs10883865	10:105168562	C/G	PDCD11	intron	0.991	1.03852	0.0109	0.0005402		7
rs10883867	10:105186817	C/G	PDCD11	intron	0.997	0.97443	0.0110	0.01845		6
rs10883868	10:105196814	A/G	PDCD11	intron	0.999	0.97893	0.0109	0.05103		6
rs112278220	10:105156736	T/G	PDCD11	intron,near-gene-5	0.935	0.93557	0.0413	0.107		4
rs113411213	10:105179646	A/C	PDCD11	intron	0.753	1.03324	0.0509	0.5211		7
rs115545027	10:105171865	A/G	PDCD11	intron	0.989	1.05411	0.0323	0.1023		6
rs116616626	10:105175355	T/C	PDCD11	intron	0.989	0.94866	0.0323	0.1023		7
rs117532580	10:105173490	A/G	PDCD11	intron	0.928	0.91659	0.0404	0.03098		6
rs117968908	10:105172436	A/G	PDCD11	intron	0.988	1.05369	0.0323	0.1052		7
rs12219609	10:105168532	C/G	PDCD11	intron	0.994	0.96909	0.0106	0.003024		7
rs12413386	10:105162320	T/C	PDCD11	intron	0.979	1.02644	0.0107	0.01429		7
rs12414609	10:105162141	A/G	PDCD11	intron	1.000	1.03066	0.0106	0.004183		6
rs137929159	10:105202501	A/G	PDCD11	intron	0.811	1.03272	0.0414	0.4371		-
rs138873813	10:105179885	A/G	PDCD11	intron	0.914	0.97736	0.0366	0.5315		-
rs139044094	10:105191154	A/C	PDCD11	intron	0.989	1.03004	0.0413	0.4728		-
rs143792242	10:105175796	T/C	PDCD11	intron	0.702	0.91229	0.0558	0.1002		-
rs144259029	10:105172132	T/C	PDCD11	intron	0.973	1.05823	0.0316	0.07321		-
rs146715278	10:105163997	T/C	PDCD11	intron	0.934	1.02071	0.0304	0.4999		-
rs146848476	10:105185476	A/G	PDCD11	intron	0.792	1.05285	0.0273	0.05903		-
rs148760303	10:105199024	A/G	PDCD11	intron	0.969	0.97258	0.0429	0.517		-
rs1536225	10:105202318	T/G	PDCD11	intron	0.999	1.02204	0.0109	0.04674		1b
rs17735658	10:105166276	A/G	PDCD11	intron	0.849	1.07530	0.0523	0.165		7
rs183347551	10:105170776	A/G	PDCD11	intron	0.663	1.12558	0.0562	0.03535		-
rs2271750	10:105174869	A/G	PDCD11	coding-synon	0.994	0.98985	0.0160	0.5229		6
rs2271751	10:105175131	T/C	PDCD11	intron	0.997	1.02706	0.0112	0.01716		6
rs2281860	10:105201577	T/C	PDCD11	intron	0.997	0.98187	0.0108	0.09087		1f
rs2281861	10:105201565	A/G	PDCD11	intron	0.999	0.97902	0.0109	0.05257		1f
rs2863730	10:105190573	T/G	PDCD11	intron	0.981	1.01501	0.0109	0.1705		6
rs2986014	10:105194086	T/C	PDCD11	missense	0.996	0.98708	0.0108	0.228		6
rs2986015	10:105199139	A/G	PDCD11	intron	0.982	1.04781	0.0291	0.1081		7
rs34354196	10:105204453	C/G	PDCD11	intron	0.907	1.00622	0.0229	0.785		5
rs35435808	10:105180910	T/C	PDCD11	intron	0.986	0.97482	0.0111	0.02121		7
rs35499499	10:105167135	A/G	PDCD11	intron	0.959	0.99054	0.0196	0.6269		7
rs35615718	10:105183736	T/C	PDCD11	intron	0.989	1.01755	0.0108	0.1076		7
rs41287492	10:105169582	A/G	PDCD11	intron	0.963	0.95399	0.0218	0.03066		7
rs41302735	10:105203785	T/C	PDCD11	coding-synon	0.990	1.03087	0.0413	0.4618		5
rs45437896	10:105165184	A/G	PDCD11	intron	0.956	1.04917	0.0127	0.0001633		7
rs4917389	10:105194476	T/C	PDCD11	intron	0.972	0.96812	0.0153	0.03366		1f
rs4918013	10:105169859	A/G	PDCD11	intron	0.992	0.98946	0.0160	0.508		7
rs61751511	10:105183348	T/C	PDCD11	missense	0.701	1.04886	0.0660	0.4698		7
rs61871170	10:105185522	T/C	PDCD11	intron	0.996	1.02030	0.0108	0.06392		7
rs61871171	10:105188868	T/C	PDCD11	intron	0.796	1.11193	0.0485	0.02852		5
rs61871172	10:105195897	A/G	PDCD11	intron	0.971	1.02061	0.0111	0.06777		5
rs6584550	10:105189770	T/C	PDCD11	intron	0.996	0.97443	0.0110	0.0186		5
rs7076463	10:105161778	T/C	PDCD11	intron	1.000	0.97210	0.0112	0.01148		7
rs7089271	10:105176914	A/G	PDCD11	intron	0.989	1.02306	0.0106	0.03096		1d
rs71471284	10:105186697	A/T	PDCD11	intron	0.968	0.97590	0.0112	0.029		6
rs72847561	10:105188180	A/G	PDCD11	intron	0.767	1.07605	0.0305	0.01639		7
rs74646973	10:105178031	A/G	PDCD11	intron	0.988	1.05327	0.0323	0.1079		5
rs74966383	10:105159770	A/T	PDCD11	intron	0.991	0.94876	0.0323	0.103		6
rs75371893	10:105176717	T/C	PDCD11	intron	0.988	1.05411	0.0323	0.1024		4
rs76903131	10:105164513	A/C	PDCD11	intron	0.990	0.94866	0.0323	0.1024		7
rs77206432	10:105177217	A/C	PDCD11	intron	0.988	0.94866	0.0323	0.1023		6
rs78629205	10:105206365	A/G	PDCD11	near-gene-3	0.863	1.11941	0.0340	0.0009115		5
rs79478408	10:105203193	A/C	PDCD11	intron	0.991	1.03087	0.0413	0.4619		5
rs942900	10:105204454	T/C	PDCD11	intron	0.982	1.01704	0.0110	0.1225		5
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information