PCCB

Basic Information

Gene Symbol	PCCB
Entrez Id	5096
Position	chr3:135969167..136049013
Description	propionyl CoA carboxylase, beta polypeptide
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10513002	3:136054982	T/G	PCCB	near-gene-3	1.010	0.97025	0.0185	0.102		5
rs111626003	3:135976502	A/G	PCCB	intron	0.630	0.96541	0.0669	0.5982		7
rs111723216	3:136023668	T/G	PCCB	intron	0.677	0.95648	0.0470	0.3435		6
rs112066868	3:136028054	T/C	PCCB	intron	1.000	1.03272	0.0185	0.08202		7
rs112116593	3:136042432	A/C	PCCB	intron	0.693	1.03593	0.0606	0.5607		7
rs112124471	3:136023800	A/G	PCCB	intron	0.920	1.03221	0.0179	0.07688		6
rs112543296	3:136023997	T/C	PCCB	intron	0.658	1.08535	0.0414	0.04802		7
rs113068452	3:136046751	T/G	PCCB	intron	0.810	1.11193	0.0652	0.1036		5
rs113375712	3:135972167	A/G	PCCB	intron	0.979	1.03035	0.0183	0.1016		7
rs113593719	3:135975250	A/T	PCCB	intron	0.819	0.88923	0.0656	0.07357		6
rs113630844	3:135994639	A/G	PCCB	intron	0.957	1.05665	0.0218	0.01132		7
rs113831697	3:135989833	C/G	PCCB	intron	0.721	1.02511	0.0609	0.684		6
rs114635206	3:135998078	A/G	PCCB	intron	0.838	1.04739	0.0523	0.3756		5
rs114968564	3:135987156	C/G	PCCB	intron	0.955	1.05274	0.0216	0.0174		6
rs115949527	3:135987732	T/G	PCCB	intron	0.890	1.05802	0.0630	0.3712		7
rs116094500	3:136004961	A/C	PCCB	intron	0.872	1.05675	0.0479	0.2496		7
rs116822870	3:136034280	A/C	PCCB	intron	0.919	1.07262	0.0601	0.2436		7
rs12163608	3:136023690	T/C	PCCB	intron	0.860	1.00552	0.0230	0.8115		7
rs12330635	3:136009590	A/G	PCCB	intron	0.989	0.98501	0.0246	0.5393		6
rs12488721	3:135992645	T/C	PCCB	intron	0.957	1.07176	0.0109	2.468E-10		6
rs12695645	3:135990881	A/T	PCCB	intron	0.997	0.98187	0.0126	0.1454		7
rs1279086	3:136038574	A/G	PCCB	intron	1.000	0.93754	0.0108	2.466E-9		6
rs1291921	3:136036226	A/G	PCCB	intron	0.991	1.05190	0.0122	0.00003327		7
rs13067714	3:136030446	T/C	PCCB	intron	1.000	0.96860	0.0186	0.08561		7
rs13071085	3:136014923	A/G	PCCB	intron	0.958	1.05359	0.0167	0.001734		6
rs13072038	3:135978797	T/C	PCCB	intron	0.997	0.98285	0.0126	0.1705		7
rs141081297	3:136023977	T/C	PCCB	intron	0.642	1.03066	0.0440	0.4929		-
rs141664190	3:135994769	T/C	PCCB	intron	0.836	1.05897	0.0418	0.1704		-
rs141758978	3:135990506	A/G	PCCB	intron	0.983	0.98452	0.0562	0.7807		-
rs142767650	3:135997059	T/C	PCCB	intron	0.655	1.09297	0.0485	0.06685		-
rs142823435	3:136032486	A/G	PCCB	intron	0.702	1.10385	0.0373	0.008056		-
rs144063788	3:136025354	T/C	PCCB	intron	0.683	0.87643	0.0668	0.04849		-
rs144263115	3:136034155	A/G	PCCB	intron	0.945	1.09593	0.0478	0.05544		-
rs144468117	3:136005687	A/G	PCCB	intron	0.795	1.20998	0.0571	0.0008446		-
rs144801536	3:136027897	A/G	PCCB	intron	0.666	1.03386	0.0654	0.6099		-
rs145019353	3:136005872	T/C	PCCB	intron	0.696	0.90168	0.0614	0.09162		-
rs145402663	3:136016358	T/C	PCCB	intron	0.973	0.88577	0.0500	0.01522		-
rs145542093	3:136024147	T/G	PCCB	intron	0.722	1.01106	0.0424	0.7959		-
rs146516051	3:136021425	T/C	PCCB	intron	0.878	1.02245	0.0176	0.2064		-
rs146580445	3:135995891	T/C	PCCB	intron	0.704	1.07208	0.0406	0.08693		-
rs147087364	3:135983517	T/C	PCCB	intron	0.626	0.90014	0.0609	0.08376		-
rs147326122	3:135992536	T/C	PCCB	intron	0.968	0.97502	0.0487	0.604		-
rs150415859	3:136048175	C/G	PCCB	intron	0.859	0.93735	0.0459	0.1588		-
rs150642554	3:135968847	A/C	PCCB	near-gene-5	0.669	1.07197	0.0723	0.3361		-
rs1618069	3:136027145	A/G	PCCB	intron	0.994	1.05591	0.0125	0.00001375		7
rs16843879	3:136003194	A/C	PCCB	intron	1.000	0.96638	0.0185	0.06423		6
rs17199880	3:136054853	C/G	PCCB	near-gene-3	1.010	0.96889	0.0185	0.08827		5
rs17252498	3:136014198	A/C	PCCB	intron	0.978	0.94630	0.0137	0.0000544		7
rs17265675	3:136045213	A/G	PCCB	intron	1.010	1.03272	0.0185	0.08238		7
rs182660887	3:136027724	A/G	PCCB	intron	0.706	1.02562	0.0391	0.518		-
rs183209265	3:136021532	A/G	PCCB	intron	0.807	0.93277	0.0458	0.129		-
rs183790712	3:136043967	A/G	PCCB	intron	0.606	1.02624	0.0461	0.5751		-
rs183829537	3:136029264	C/G	PCCB	intron	0.704	0.90629	0.0630	0.1183		-
rs183872648	3:135986949	T/C	PCCB	intron	0.682	0.95638	0.0308	0.1483		-
rs184480043	3:136034765	A/G	PCCB	intron	0.919	1.07262	0.0601	0.2438		-
rs184993788	3:136018077	T/C	PCCB	intron	0.745	1.09626	0.0564	0.1034		-
rs185392523	3:136034300	T/C	PCCB	intron	0.952	1.12806	0.0525	0.02179		-
rs187137629	3:136014171	T/C	PCCB	intron	0.911	1.05232	0.0580	0.3798		-
rs188141209	3:135988544	A/G	PCCB	intron	0.691	0.95371	0.0377	0.2087		-
rs191637387	3:135985255	A/G	PCCB	intron	0.983	1.01582	0.0562	0.7795		-
rs2290131	3:135980673	T/C	PCCB	intron	0.948	0.94469	0.0126	6.25E-6		7
rs28812220	3:135984966	A/G	PCCB	intron	0.985	0.97035	0.0115	0.008641		7
rs34031772	3:136018141	T/C	PCCB	intron	0.961	0.98157	0.0132	0.1568		6
rs34153877	3:136021052	A/C	PCCB	intron	0.808	0.98995	0.0146	0.4906		7
rs34428695	3:136034741	C/G	PCCB	intron	0.969	0.99710	0.0160	0.8556		6
rs34511849	3:136023469	T/C	PCCB	intron	0.872	0.95142	0.0162	0.002136		7
rs34726739	3:135986944	A/G	PCCB	intron	0.683	1.05654	0.0183	0.002604		6
rs35058853	3:136050764	A/G	PCCB	intron	0.989	0.97229	0.0114	0.0139		6
rs35522825	3:136038198	T/C	PCCB	intron	0.969	0.99720	0.0160	0.863		7
rs35681043	3:135980425	T/G	PCCB	intron	0.983	0.97258	0.0114	0.01494		5
rs3821445	3:136002809	T/C	PCCB	intron	0.988	0.94403	0.0136	0.0000239		7
rs3913715	3:136035119	A/G	PCCB	intron	1.000	1.03396	0.0185	0.07027		6
rs4125861	3:136038421	A/G	PCCB	intron	1.010	1.03283	0.0185	0.08122		7
rs4484145	3:135983440	C/G	PCCB	intron	0.962	1.04603	0.0181	0.01293		7
rs4678428	3:135988412	A/G	PCCB	intron	0.999	0.94942	0.0124	0.00002987		7
rs4678429	3:135993276	C/G	PCCB	intron	0.818	0.92478	0.0261	0.00275		6
rs480330	3:136028987	T/C	PCCB	intron	0.955	0.95009	0.0114	6.677E-6		6
rs483465	3:136047977	A/G	PCCB	intron	1.000	1.05422	0.0124	0.00002104		7
rs489398	3:135995498	T/C	PCCB	intron	0.988	1.06046	0.0136	0.00001625		5
rs518972	3:136039268	A/C	PCCB	intron	1.000	0.93754	0.0108	2.448E-9		6
rs60614489	3:135986978	A/C	PCCB	intron	0.902	0.97472	0.0121	0.03482		6
rs61789606	3:136037742	T/C	PCCB	intron	0.852	1.05475	0.0247	0.03116		6
rs61789607	3:136055025	T/C	PCCB	near-gene-3	0.955	1.01410	0.0479	0.7694		7
rs650326	3:136037707	A/G	PCCB	intron	1.000	0.93744	0.0108	2.337E-9		7
rs650505	3:135994043	C/G	PCCB	intron	0.970	0.96117	0.0114	0.0004794		7
rs664088	3:136036986	T/C	PCCB	intron	0.980	1.06567	0.0109	5.615E-9		7
rs66895236	3:136032049	A/G	PCCB	intron	0.914	1.00070	0.0196	0.972		5
rs67214626	3:135989376	T/C	PCCB	intron	0.984	1.02850	0.0114	0.01394		7
rs67389407	3:136034503	T/C	PCCB	intron	1.000	0.96686	0.0185	0.06765		7
rs67452583	3:136044493	T/C	PCCB	intron	0.996	1.02778	0.0183	0.1348		7
rs67677899	3:136032095	A/G	PCCB	intron	1.000	1.03283	0.0185	0.0817		5
rs67692166	3:135970704	A/C	PCCB	intron	1.000	1.03303	0.0186	0.07937		5
rs6776841	3:136042164	T/C	PCCB	intron	0.988	0.97258	0.0114	0.01487		6
rs71336055	3:136020454	T/C	PCCB	intron	0.953	1.05380	0.0168	0.001763		7
rs71336056	3:136023232	A/T	PCCB	intron	0.848	0.99084	0.0116	0.4243		6
rs72493178	3:135972597	T/C	PCCB	intron	0.971	1.02511	0.0289	0.3913		7
rs73222262	3:135982417	A/C	PCCB	intron	0.986	0.98639	0.0247	0.5774		6
rs74934894	3:136000349	A/G	PCCB	intron	0.680	1.06844	0.0404	0.1012		6
rs75456511	3:135977331	A/G	PCCB	intron	0.812	1.06386	0.0511	0.2264		5
rs75490702	3:135982888	A/G	PCCB	intron	0.871	0.94573	0.0479	0.2443		7
rs7622833	3:136041921	T/C	PCCB	intron	0.994	0.97142	0.0113	0.01061		5
rs7653249	3:136005792	C/G	PCCB	intron	0.942	1.05496	0.0124	0.00001663		7
rs77082554	3:135992378	T/C	PCCB	intron	0.829	1.04144	0.0494	0.4117		7
rs77340672	3:136043643	T/C	PCCB	intron	0.946	1.10054	0.0480	0.04584		7
rs78787340	3:135977904	A/G	PCCB	intron	0.897	1.03956	0.0503	0.4397		7
rs79079820	3:136006957	C/G	PCCB	intron	0.704	1.03469	0.0575	0.5535		6
rs838202	3:136035217	A/G	PCCB	intron	1.000	0.93725	0.0108	2.124E-9		6
rs866782	3:135983497	T/C	PCCB	intron	0.985	1.06046	0.0137	0.00001727		6
rs9289506	3:135983284	A/G	PCCB	intron	0.821	0.95619	0.0193	0.02052		6
rs9826146	3:135983089	A/G	PCCB	intron	0.986	0.97006	0.0115	0.007964		7
rs9833162	3:136035737	A/G	PCCB	intron	0.988	0.97219	0.0114	0.01354		7
rs9843348	3:136007257	A/G	PCCB	intron	0.993	0.97103	0.0113	0.009641		7
rs9843801	3:136000746	T/C	PCCB	intron	0.991	0.97171	0.0114	0.01141		7
rs9844666	3:135974216	A/G	PCCB	intron	0.997	1.01725	0.0126	0.1748		6
rs9848883	3:136008432	A/G	PCCB	intron	0.989	0.98226	0.0245	0.4669		7
rs9852811	3:136021647	T/C	PCCB	intron	0.802	0.99005	0.0422	0.8137		7
rs9853387	3:136038988	A/G	PCCB	intron	0.994	0.97132	0.0113	0.01023		6
rs9856769	3:136027640	A/G	PCCB	intron	0.987	1.01643	0.0247	0.5089		7
rs9866840	3:136029258	C/G	PCCB	intron	0.996	1.02041	0.0126	0.1097		6
rs9872178	3:135986438	T/G	PCCB	intron	0.997	0.98216	0.0126	0.1524		7
rs9872326	3:135986544	T/G	PCCB	intron	0.993	0.97122	0.0113	0.009963		7
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

Reference	Study type	Sample size
18511947	GWAS	359 cases; 718 controls
Reference	Study type	Sample size

eQTL Information