PBX4

Basic Information

Gene Symbol	PBX4
Entrez Id	80714
Position	chr19:19672516..19729725
Description	pre-B-cell leukemia homeobox 4
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10403759	19:19725088	T/C	PBX4	intron	0.994	1.06247	0.0120	4.843E-7		7
rs10412176	19:19689164	T/C	PBX4	intron	0.966	1.05243	0.0136	0.0001623		5
rs10415813	19:19689231	A/G	PBX4	intron	0.946	1.02173	0.0310	0.4865		5
rs10416924	19:19719840	A/G	PBX4	intron,untranslated-5	0.973	1.04456	0.0109	0.000066		7
rs10417097	19:19719824	C/G	PBX4	intron,untranslated-5	0.967	1.04561	0.0109	0.00004537		6
rs10500212	19:19723215	T/C	PBX4	intron	0.997	1.02081	0.0187	0.2689		5
rs111643510	19:19684181	T/C	PBX4	intron	0.639	0.96377	0.0402	0.3582		6
rs111941379	19:19715661	A/G	PBX4	intron	0.972	0.98314	0.0123	0.1675		7
rs116903729	19:19676257	T/C	PBX4	intron	0.660	0.92164	0.0582	0.1608		5
rs117286556	19:19714886	A/G	PBX4	intron	0.693	0.93810	0.0293	0.02935		7
rs117316432	19:19689191	T/C	PBX4	intron	0.686	0.96512	0.0356	0.3191		5
rs118087542	19:19712797	T/C	PBX4	intron	0.789	0.97941	0.0282	0.4614		7
rs12608729	19:19700552	T/C	PBX4	intron	0.992	1.02429	0.0187	0.1982		7
rs12610185	19:19721722	A/G	PBX4	intron,near-gene-5	0.998	1.02214	0.0187	0.2407		5
rs12610191	19:19721976	T/C	PBX4	intron,near-gene-5	0.998	1.02183	0.0187	0.247		6
rs12611058	19:19714804	T/C	PBX4	intron	0.974	1.01633	0.0124	0.1899		7
rs12976826	19:19729194	T/C	PBX4	intron	0.978	1.07605	0.0212	0.0005607		5
rs12977917	19:19693299	A/G	PBX4	intron	0.971	0.98452	0.0124	0.2091		1f
rs12981270	19:19688646	A/G	PBX4	intron	0.971	0.98590	0.0124	0.253		7
rs12982628	19:19683357	C/G	PBX4	intron,near-gene-5	0.970	1.01308	0.0124	0.2939		7
rs12985142	19:19678371	A/G	PBX4	intron	0.970	1.01147	0.0122	0.3531		5
rs142225811	19:19689371	T/C	PBX4	intron	0.813	1.13349	0.0600	0.03662		-
rs144970819	19:19700396	T/C	PBX4	intron	0.759	1.01765	0.0364	0.6307		-
rs150932566	19:19697833	A/G	PBX4	intron	0.907	1.01735	0.0550	0.7548		-
rs16996174	19:19708551	C/G	PBX4	intron	0.977	0.93165	0.0212	0.0008513		3a
rs16996185	19:19720788	T/G	PBX4	intron,near-gene-5	0.999	0.97912	0.0186	0.2584		6
rs183868687	19:19690074	T/C	PBX4	intron	0.792	1.12210	0.0612	0.05974		-
rs187260376	19:19689619	A/G	PBX4	intron	0.814	1.02727	0.0615	0.6623		-
rs1968047	19:19721061	A/G	PBX4	intron,near-gene-5	0.934	0.93866	0.0120	1.415E-7		7
rs34096655	19:19728071	T/C	PBX4	intron	0.972	0.98423	0.0124	0.1986		7
rs34316527	19:19709801	A/G	PBX4	intron	0.960	1.01613	0.0125	0.1992		4
rs34324119	19:19689633	A/G	PBX4	intron	0.971	0.98797	0.0122	0.3218		2b
rs34424437	19:19696970	A/C	PBX4	intron	0.969	0.98551	0.0124	0.2388		7
rs34725943	19:19715682	T/C	PBX4	intron	0.651	0.95123	0.0499	0.316		6
rs35209041	19:19726018	T/C	PBX4	intron	0.971	1.01745	0.0123	0.1606		4
rs35437712	19:19728648	A/C	PBX4	intron	0.969	1.01776	0.0123	0.1524		5
rs35545554	19:19715613	A/G	PBX4	intron	0.983	1.05327	0.0135	0.0001185		6
rs35553578	19:19712534	C/G	PBX4	intron	0.963	0.98501	0.0123	0.2204		7
rs35842591	19:19707494	A/G	PBX4	intron	0.971	1.01511	0.0123	0.2223		6
rs4802218	19:44800268	T/G	PBX4	intron	0.999	0.99000	0.0211	0.2916		6
rs4808973	19:19725456	A/G	PBX4	intron	0.979	1.04949	0.0136	0.0003669		7
rs58847337	19:19726022	A/G	PBX4	intron	0.992	1.02112	0.0187	0.2651		4
rs59350672	19:19688629	C/G	PBX4	intron	0.968	0.95619	0.0109	0.0000406		7
rs62137778	19:19682541	A/G	PBX4	intron,near-gene-5	0.969	1.04666	0.0109	0.00002736		5
rs62137783	19:19690722	A/G	PBX4	intron	0.971	0.98580	0.0124	0.2479		5
rs62137816	19:19713353	T/C	PBX4	intron	0.973	0.98403	0.0124	0.1919		5
rs6511041	19:19680650	T/C	PBX4	intron	0.968	0.95399	0.0109	0.00001622		6
rs6511046	19:19727042	T/C	PBX4	intron	0.972	0.95638	0.0110	0.00004797		5
rs7245672	19:19699963	T/C	PBX4	intron	0.986	1.06184	0.0112	7.92E-8		7
rs7252228	19:19722864	A/G	PBX4	intron	0.994	1.06279	0.0120	4.245E-7		6
rs73004933	19:19675696	T/C	PBX4	intron	0.991	1.02020	0.0189	0.2906		5
rs73004951	19:19695228	T/C	PBX4	intron	0.991	1.02265	0.0188	0.2326		5
rs73004959	19:19711139	T/C	PBX4	intron	0.989	1.02306	0.0187	0.2232		7
rs73004962	19:19713069	A/T	PBX4	intron	0.995	0.98108	0.0187	0.3072		2b
rs73004966	19:19716558	T/C	PBX4	intron	0.992	1.01928	0.0187	0.3055		5
rs73004967	19:19717056	A/G	PBX4	intron	0.957	0.97971	0.0210	0.3294		4
rs73004975	19:19727152	A/G	PBX4	intron	0.987	0.97716	0.0186	0.2135		6
rs76133364	19:19706214	A/C	PBX4	intron	0.760	1.01745	0.0363	0.6333		4
rs76633357	19:19703762	T/C	PBX4	intron	0.946	1.06599	0.0201	0.001487		5
rs76636151	19:19714991	A/C	PBX4	intron	0.788	0.98403	0.0264	0.5427		6
rs79683903	19:19724876	T/C	PBX4	intron	0.754	1.03314	0.0488	0.5035		7
rs8099944	19:19716054	A/G	PBX4	intron	0.969	0.95801	0.0109	0.00009021		6
rs8103250	19:19679461	A/G	PBX4	intron	0.966	1.06332	0.0112	4.798E-8		5
rs8108659	19:19680738	A/T	PBX4	intron	0.995	0.95171	0.0136	0.0002615		6
rs8108705	19:19675367	T/G	PBX4	intron	0.986	0.94233	0.0112	1.171E-7		6
rs8110266	19:19723883	T/C	PBX4	intron	0.966	0.95533	0.0109	0.00002957		6
rs8113221	19:19677010	T/C	PBX4	intron	0.971	0.95285	0.0109	9.673E-6		5
rs9304962	19:19679992	C/G	PBX4	intron	0.984	0.94233	0.0112	1.175E-7		4
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information