NT5C2

Basic Information

Gene Symbol	NT5C2
Entrez Id	22978
Position	chr10:104845940..104953056
Description	5'-nucleotidase, cytosolic II
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10509765	10:104924820	A/G	NT5C2	intron	0.998	1.02675	0.0149	0.07642		6
rs10509766	10:104926334	T/C	NT5C2	intron	1.000	1.03717	0.0113	0.001241		7
rs10748837	10:104880236	T/C	NT5C2	intron	1.000	1.08828	0.0107	2.9E-15		7
rs10748838	10:104943986	A/T	NT5C2	intron	0.997	0.92026	0.0107	1.06E-14		5
rs10786737	10:104857218	A/C	NT5C2	intron	0.998	1.04550	0.0142	0.001735		7
rs10786738	10:104869451	T/C	NT5C2	intron	1.000	0.96406	0.0113	0.001198		7
rs10786739	10:104886188	C/G	NT5C2	intron	0.999	1.08785	0.0107	4.753E-15		7
rs10786741	10:104939182	A/G	NT5C2	intron	1.000	0.96416	0.0113	0.001237		7
rs10786742	10:104939283	A/G	NT5C2	intron	1.000	1.03707	0.0113	0.00127		6
rs10786743	10:104943342	A/G	NT5C2	intron	0.996	1.08730	0.0108	7.327E-15		7
rs10786744	10:104945028	A/C	NT5C2	intron	1.000	0.96348	0.0114	0.001063		6
rs10883830	10:104851285	A/G	NT5C2	intron	1.000	0.96358	0.0114	0.001105		7
rs10883831	10:104857234	A/C	NT5C2	intron	0.995	0.95028	0.0150	0.0006718		6
rs10883832	10:104871279	T/G	NT5C2	intron	1.000	1.15974	0.0182	4.296E-16		1f
rs10883834	10:104881402	T/C	NT5C2	intron	1.000	1.03676	0.0113	0.001393		4
rs10883835	10:104884208	T/C	NT5C2	intron	1.000	1.15777	0.0182	8.054E-16		7
rs10883836	10:104891198	T/C	NT5C2	intron	1.000	1.03707	0.0113	0.00126		6
rs10883837	10:104896486	A/G	NT5C2	intron	1.000	0.91916	0.0107	3.524E-15		7
rs10883839	10:104920341	A/G	NT5C2	intron	1.000	1.03749	0.0113	0.001124		6
rs10883840	10:104922039	A/G	NT5C2	intron	1.000	1.08828	0.0107	2.868E-15		7
rs10883841	10:104934709	T/C	NT5C2	missense,untranslated-5	0.998	1.05264	0.0149	0.0006026		7
rs10883842	10:104941589	T/C	NT5C2	intron	0.992	0.92026	0.0108	1.318E-14		5
rs10883843	10:104947493	C/G	NT5C2	intron	1.000	1.03821	0.0114	0.0009826		1f
rs111278264	10:104895297	T/C	NT5C2	intron	0.987	0.96938	0.0180	0.08369		5
rs111622998	10:104953021	A/C	NT5C2	untranslated-5	0.849	0.95849	0.0167	0.01097		4
rs11191554	10:104855278	T/C	NT5C2	intron	1.000	0.95667	0.0142	0.001784		6
rs11191575	10:104898337	T/C	NT5C2	intron	1.000	0.86433	0.0182	1.076E-15		7
rs11191582	10:104913653	A/G	NT5C2	intron,near-gene-5	0.997	0.86062	0.0184	2.966E-16		1f
rs11191600	10:104949709	A/G	NT5C2	intron	1.000	0.96425	0.0114	0.001366		5
rs112224955	10:104926876	A/G	NT5C2	intron	0.991	0.96512	0.0180	0.04821		7
rs113973959	10:104932062	A/G	NT5C2	intron	0.987	0.96204	0.0181	0.03235		6
rs114373406	10:104939052	T/C	NT5C2	intron	0.996	1.01207	0.0379	0.7516		6
rs115915120	10:104915018	A/T	NT5C2	intron,near-gene-5	0.786	1.06003	0.0336	0.08307		5
rs115952365	10:104952587	C/G	NT5C2	intron	0.975	0.97054	0.0259	0.2486		4
rs1163238	10:104943993	A/G	NT5C2	intron	0.993	1.07079	0.0109	4.267E-10		1f
rs1163249	10:104909890	A/G	NT5C2	intron	0.997	1.02798	0.0133	0.03783		1f
rs116821290	10:104943390	T/C	NT5C2	intron	0.977	0.93230	0.0128	4.415E-8		6
rs116925486	10:104930391	T/C	NT5C2	intron	0.946	1.03200	0.0396	0.4266		7
rs116976910	10:104898422	A/G	NT5C2	intron	0.760	0.96233	0.0630	0.5426		6
rs116979997	10:104949734	T/C	NT5C2	intron	0.809	1.05961	0.0276	0.03612		5
rs116993824	10:104873431	C/G	NT5C2	intron	0.894	1.03541	0.0368	0.3438		7
rs117715523	10:104933023	A/C	NT5C2	intron	0.818	1.03552	0.0417	0.4028		7
rs117814456	10:104867639	T/C	NT5C2	intron	0.873	1.07037	0.0185	0.0002312		6
rs118141064	10:104930682	T/C	NT5C2	intron	0.877	0.89691	0.0518	0.03549		6
rs12217501	10:104851889	T/C	NT5C2	intron	1.000	1.15928	0.0182	4.792E-16		6
rs12219304	10:104931584	C/G	NT5C2	intron	0.989	0.86649	0.0185	8.758E-15		7
rs12220375	10:104901491	T/C	NT5C2	intron	1.000	1.15801	0.0182	7.254E-16		6
rs12220743	10:104851912	T/C	NT5C2	intron	1.000	0.86278	0.0182	5.262E-16		7
rs12240508	10:104939232	A/G	NT5C2	intron	0.996	0.98482	0.0150	0.3085		7
rs12243903	10:104906992	T/C	NT5C2	intron,near-gene-5	0.996	1.01521	0.0150	0.3137		6
rs12244207	10:104933654	A/G	NT5C2	intron	0.987	1.01461	0.0150	0.335		7
rs12255989	10:104867206	T/C	NT5C2	intron	0.994	0.98432	0.0150	0.2924		7
rs12257472	10:104933449	T/C	NT5C2	intron	0.996	0.96117	0.0117	0.0006821		6
rs12262258	10:104900272	A/G	NT5C2	intron	0.996	0.98501	0.0150	0.3137		7
rs12355120	10:104852166	T/G	NT5C2	intron	1.000	1.03676	0.0113	0.001376		6
rs12412038	10:104856162	A/G	NT5C2	intron	1.000	0.86278	0.0182	5.022E-16		1f
rs12413046	10:104871204	A/G	NT5C2	intron	1.000	1.15847	0.0182	6.028E-16		1f
rs12414232	10:104914491	A/T	NT5C2	intron,near-gene-5	1.000	1.03686	0.0113	0.001338		2b
rs12415199	10:104895536	T/C	NT5C2	intron	1.000	1.03728	0.0113	0.00121		6
rs12416331	10:104928914	A/T	NT5C2	intron	1.000	0.86217	0.0183	4.593E-16		5
rs12571568	10:104891396	C/G	NT5C2	intron	1.000	1.08796	0.0107	3.493E-15		7
rs12763944	10:104926485	T/C	NT5C2	intron	0.952	1.05348	0.0165	0.001543		4
rs12766205	10:104893568	A/G	NT5C2	intron	1.000	1.08796	0.0107	3.602E-15		6
rs12773916	10:104924838	A/G	NT5C2	intron	0.999	0.95028	0.0150	0.0006548		7
rs12774207	10:104952632	A/G	NT5C2	intron	0.985	0.95047	0.0152	0.000847		2b
rs12774412	10:104933511	T/G	NT5C2	intron	0.998	0.95028	0.0150	0.0006538		7
rs12774513	10:104903666	T/C	NT5C2	intron	0.998	0.95056	0.0150	0.0006951		6
rs12775302	10:104911356	A/G	NT5C2	intron	1.000	1.03717	0.0113	0.001247		7
rs12779263	10:104886533	T/G	NT5C2	intron	0.999	0.96108	0.0116	0.0006228		6
rs12780509	10:104895568	T/G	NT5C2	intron	0.996	0.95047	0.0150	0.0006751		6
rs140193005	10:104861423	T/C	NT5C2	intron	0.923	0.97307	0.0390	0.4839		-
rs140795780	10:104853407	T/C	NT5C2	intron	0.941	1.02265	0.0418	0.5913		-
rs140814859	10:104867695	T/G	NT5C2	intron	0.997	0.98787	0.0380	0.7481		-
rs141637838	10:104922746	C/G	NT5C2	intron	0.941	1.01979	0.0423	0.6426		-
rs143956083	10:104932361	A/G	NT5C2	intron	0.770	1.08872	0.0304	0.005132		-
rs145599854	10:104944957	A/G	NT5C2	intron	0.905	1.19494	0.0529	0.0007569		-
rs145870899	10:104879798	A/G	NT5C2	intron	0.820	1.05327	0.0262	0.04772		-
rs146240286	10:104925543	C/G	NT5C2	intron	0.996	0.98679	0.0379	0.7262		-
rs146569383	10:104892483	A/T	NT5C2	intron	0.990	1.02255	0.0252	0.3763		-
rs147351091	10:104895493	A/T	NT5C2	intron	0.997	1.01562	0.0418	0.7099		-
rs148828123	10:104854262	A/G	NT5C2	intron	0.631	0.92793	0.0568	0.1883		-
rs149040511	10:104891928	T/C	NT5C2	intron	0.760	0.96233	0.0630	0.5422		-
rs149363415	10:104953044	A/G	NT5C2	near-gene-5,untranslated-5	0.885	0.93904	0.0129	1.004E-6		-
rs149555487	10:104924039	A/G	NT5C2	intron	0.777	0.98098	0.0237	0.419		-
rs149606855	10:104918805	T/C	NT5C2	intron	0.807	0.99064	0.0619	0.8791		-
rs150201993	10:104875136	A/G	NT5C2	intron	0.697	1.07015	0.0502	0.177		-
rs1541213	10:104885330	A/G	NT5C2	intron	1.000	1.03707	0.0113	0.001274		4
rs17094683	10:104851301	T/G	NT5C2	intron	1.000	0.86355	0.0182	7.68E-16		6
rs17795366	10:104850155	T/C	NT5C2	intron	0.904	1.20780	0.0443	0.00002001		7
rs180845012	10:104903372	T/G	NT5C2	intron	0.972	1.16230	0.0190	2.491E-15		-
rs182512562	10:104908344	C/G	NT5C2	intron	0.941	1.02316	0.0418	0.5837		-
rs183015811	10:104932167	A/G	NT5C2	intron	0.786	1.07885	0.0275	0.005749		-
rs184211672	10:104942243	A/G	NT5C2	intron	0.996	1.01217	0.0379	0.7507		-
rs186185218	10:104903384	T/G	NT5C2	intron	0.972	1.16509	0.0190	7.996E-16		-
rs187278792	10:104861396	T/C	NT5C2	intron	0.717	1.11472	0.0532	0.04133		-
rs190000397	10:104933679	T/C	NT5C2	intron	0.941	1.04321	0.0407	0.2993		-
rs190300909	10:104927860	A/C	NT5C2	intron	0.676	1.03107	0.0554	0.581		-
rs192276799	10:104937209	T/G	NT5C2	intron,near-gene-5	0.868	0.94781	0.0539	0.3192		-
rs1935323	10:104877035	T/C	NT5C2	intron	1.000	1.03821	0.0114	0.0009612		6
rs2066322	10:104909339	T/G	NT5C2	intron	1.000	1.03800	0.0114	0.001027		6
rs2066323	10:104871361	A/G	NT5C2	intron	0.992	1.08134	0.0108	4.602E-13		4
rs2148197	10:104891975	T/C	NT5C2	intron	0.989	1.08730	0.0108	9.82E-15		7
rs2148198	10:104915310	A/G	NT5C2	intron,near-gene-5	1.000	0.96474	0.0113	0.001484		1f
rs2148199	10:104879856	A/G	NT5C2	intron	0.997	0.98787	0.0380	0.748		6
rs2148200	10:104879847	A/C	NT5C2	intron	0.995	0.96406	0.0114	0.001283		7
rs2153774	10:104881035	T/C	NT5C2	intron	1.000	1.03738	0.0113	0.001167		4
rs2182348	10:104872684	A/G	NT5C2	intron	1.000	1.03728	0.0113	0.001201		6
rs2274339	10:104860053	A/T	NT5C2	intron	1.000	0.96300	0.0114	0.0009018		7
rs2274340	10:104853577	T/C	NT5C2	intron	0.956	0.93501	0.0345	0.05126		6
rs2274341	10:104853503	A/T	NT5C2	intron	0.983	0.93389	0.0128	9.16E-8		6
rs2281877	10:104866062	T/C	NT5C2	intron	1.000	0.96406	0.0113	0.001195		7
rs3087681	10:104952625	T/G	NT5C2	intron	0.980	0.94933	0.0151	0.0005835		2b
rs34104646	10:104896078	A/T	NT5C2	intron	1.000	0.96416	0.0113	0.00123		7
rs34130454	10:104903638	A/G	NT5C2	intron	1.000	1.04008	0.0113	0.0005404		6
rs34747231	10:104942244	T/G	NT5C2	intron	0.993	1.16067	0.0184	5.272E-16		6
rs34758128	10:104850620	A/C	NT5C2	intron	0.901	1.03355	0.0190	0.08301		7
rs35195396	10:104928770	A/T	NT5C2	intron	0.977	0.96638	0.0113	0.00258		5
rs35348020	10:104899869	T/C	NT5C2	intron	0.998	0.94999	0.0150	0.0006033		5
rs35525740	10:104941112	A/T	NT5C2	intron	0.994	1.08785	0.0108	5.336E-15		3a
rs35745742	10:104922870	T/C	NT5C2	intron	0.818	1.12142	0.0341	0.0007871		7
rs3781280	10:104863843	T/G	NT5C2	intron	0.993	1.03634	0.0113	0.001618		7
rs3781281	10:104852648	A/G	NT5C2	intron	1.000	0.96416	0.0113	0.001216		6
rs3781282	10:104852419	A/G	NT5C2	intron	1.000	1.03697	0.0113	0.001297		6
rs3861983	10:104916857	T/C	NT5C2	intron	1.000	1.04530	0.0142	0.001756		6
rs3861984	10:104916980	T/C	NT5C2	intron	1.000	1.03697	0.0113	0.00132		7
rs41287482	10:104860933	A/G	NT5C2	intron	0.926	0.94148	0.0434	0.1649		7
rs4917996	10:104925829	A/C	NT5C2	intron	1.000	1.08796	0.0107	3.621E-15		7
rs4917997	10:104945213	A/G	NT5C2	intron	0.998	1.08643	0.0107	1.177E-14		5
rs61870853	10:104874609	A/C	NT5C2	intron	0.804	0.92422	0.0546	0.1489		4
rs6584539	10:104879402	C/G	NT5C2	intron	1.000	0.96406	0.0113	0.001211		7
rs6584540	10:104927634	A/G	NT5C2	intron	0.983	1.08394	0.0108	6.823E-14		7
rs6584541	10:104929124	A/G	NT5C2	intron	1.000	1.03811	0.0114	0.000991		6
rs66652022	10:104923595	A/G	NT5C2	intron	0.976	0.97025	0.0113	0.007476		6
rs7067663	10:104883650	A/G	NT5C2	intron	0.997	1.03603	0.0113	0.00177		4
rs7067970	10:104913870	T/C	NT5C2	intron,near-gene-5	1.000	0.91906	0.0107	3.565E-15		3a
rs7075552	10:104948712	T/C	NT5C2	intron	0.991	1.03655	0.0114	0.001651		5
rs7077097	10:104945463	A/G	NT5C2	intron	0.998	0.92035	0.0107	1.134E-14		6
rs7077291	10:104945751	T/C	NT5C2	intron	0.998	0.92054	0.0107	1.237E-14		7
rs7080242	10:104854444	T/G	NT5C2	intron	0.810	0.85590	0.0606	0.01021		7
rs7080935	10:104929113	A/C	NT5C2	intron	0.996	0.98511	0.0150	0.3168		7
rs7081075	10:104929191	T/C	NT5C2	intron	1.000	0.91962	0.0107	5.429E-15		7
rs7091462	10:104948615	T/C	NT5C2	intron	0.994	0.98501	0.0150	0.3156		5
rs7092407	10:104949116	A/G	NT5C2	intron	0.995	0.92054	0.0108	1.334E-14		7
rs72843997	10:104853290	A/G	NT5C2	intron	0.988	0.97629	0.0251	0.3405		7
rs72843998	10:104855261	T/C	NT5C2	intron	0.947	0.93314	0.0148	2.798E-6		7
rs72843999	10:104855267	T/C	NT5C2	intron	0.989	1.02286	0.0252	0.3683		7
rs72844002	10:104861736	T/G	NT5C2	intron	0.988	0.97550	0.0251	0.3227		6
rs72844301	10:104896100	A/G	NT5C2	intron	0.927	1.02398	0.0326	0.4677		7
rs72846103	10:104896751	A/T	NT5C2	intron	0.986	0.98059	0.0249	0.4304		7
rs72846714	10:104878454	A/G	NT5C2	intron	0.994	0.98472	0.0150	0.3049		7
rs74233809	10:104913940	T/C	NT5C2	intron,near-gene-5	0.997	1.15569	0.0183	2.54E-15		4
rs74827204	10:104917227	A/T	NT5C2	intron	0.990	0.97746	0.0251	0.3651		4
rs74838281	10:104886919	A/C	NT5C2	intron	0.945	1.01939	0.0551	0.7269		6
rs75221325	10:104880773	A/G	NT5C2	intron	0.815	0.94403	0.0272	0.03426		5
rs75287094	10:104892216	T/C	NT5C2	intron	0.997	0.98807	0.0380	0.7514		7
rs75580295	10:104948720	C/G	NT5C2	intron	0.895	0.82762	0.0436	0.00001426		5
rs75839032	10:104928164	C/G	NT5C2	intron	0.996	1.01197	0.0379	0.7536		6
rs75874395	10:104942060	T/C	NT5C2	intron	0.967	0.97756	0.0534	0.6701		7
rs76003516	10:104886612	A/G	NT5C2	intron	0.919	0.94478	0.0387	0.1417		7
rs76558380	10:104915471	T/C	NT5C2	intron,near-gene-5	0.818	0.96561	0.0417	0.4009		4
rs77101218	10:104896386	A/T	NT5C2	intron	0.780	1.03128	0.0320	0.3366		6
rs77420391	10:104945823	A/G	NT5C2	intron	0.991	0.86433	0.0185	3.186E-15		7
rs77593808	10:104856100	A/C	NT5C2	intron	0.903	1.21082	0.0443	0.00001547		5
rs77602755	10:104939538	T/C	NT5C2	intron	0.814	0.94280	0.0367	0.1085		6
rs78436955	10:104900841	T/C	NT5C2	intron	0.997	1.01278	0.0380	0.7385		6
rs7896519	10:104866863	T/C	NT5C2	intron	0.999	0.91065	0.0110	1.739E-17		7
rs7896547	10:104866958	A/G	NT5C2	intron	1.000	1.08883	0.0107	2.137E-15		6
rs7897663	10:104905604	T/C	NT5C2	intron	0.994	1.03666	0.0114	0.00153		6
rs79082900	10:104877302	T/C	NT5C2	intron	1.000	1.15824	0.0182	7.064E-16		5
rs7913920	10:104923628	A/C	NT5C2	intron	0.815	0.92146	0.0119	5.425E-12		6
rs7920251	10:104950197	T/C	NT5C2	intron	0.997	0.92118	0.0108	2.179E-14		5
rs79237111	10:104882889	T/C	NT5C2	intron	0.760	0.94810	0.0639	0.4043		6
rs79237883	10:104940946	T/C	NT5C2	intron,untranslated-5	1.000	1.15754	0.0182	9.408E-16		5
rs79331374	10:104882913	A/G	NT5C2	intron	0.990	0.96715	0.0178	0.06034		7
rs79438485	10:104851400	A/G	NT5C2	intron	0.990	1.01430	0.0384	0.711		7
rs79680647	10:104910959	A/G	NT5C2	intron	1.000	0.86278	0.0183	6.185E-16		7
rs79780963	10:104952499	T/C	NT5C2	intron	0.996	0.86347	0.0182	7.513E-16		4
rs79993475	10:104901031	A/G	NT5C2	intron	1.000	1.15720	0.0182	9.693E-16		7
rs80084683	10:104946325	A/T	NT5C2	intron	0.909	0.90105	0.0492	0.03423		6
rs80122405	10:104866815	A/G	NT5C2	intron	0.676	1.03458	0.0377	0.3672		7
rs9633712	10:104873761	C/G	NT5C2	intron	1.000	0.86355	0.0182	7.087E-16		1e
rs9919485	10:104902737	T/C	NT5C2	intron	0.996	1.08546	0.0108	2.56E-14		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information