NEK1

Basic Information

Gene Symbol	NEK1
Entrez Id	4750
Position	chr4:170314421..170533778
Description	NIMA-related kinase 1
Gene type	protein-coding

SNP Information

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SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10001274	4:170471183	T/C	NEK1	intron	0.997	0.97103	0.0128	0.02169		6
rs10004634	4:170412186	T/C	NEK1	intron	0.992	0.96831	0.0139	0.0203		6
rs10006588	4:170447306	T/C	NEK1	intron	0.999	1.04102	0.0210	0.05582		7
rs10007145	4:170507618	T/G	NEK1	intron	0.999	0.96137	0.0210	0.06043		7
rs10007936	4:170508451	T/C	NEK1	intron	0.999	0.96137	0.0210	0.06043		7
rs10011783	4:170328879	C/G	NEK1	intron	0.981	0.95504	0.0121	0.0001341		5
rs10012920	4:170449879	T/C	NEK1	intron	0.999	0.96098	0.0210	0.05814		6
rs10016460	4:170481414	A/T	NEK1	intron	0.999	1.04050	0.0210	0.05845		7
rs10016485	4:170516353	T/C	NEK1	intron	0.998	0.95037	0.0127	0.00005893		7
rs10017918	4:170352033	A/G	NEK1	intron	0.999	1.02439	0.0167	0.1497		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Showing 1 to 10 of 425 entries

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Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information