MDGA1

Basic Information

Gene Symbol	MDGA1
Entrez Id	266727
Position	chr6:37600284..37665766
Description	MAM domain containing glycosylphosphatidylinositol anchor 1
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10456455	6:37605405	T/C	MDGA1	intron,near-gene-3	0.850	1.01867	0.0137	0.1748		5
rs10456456	6:37651563	A/G	MDGA1	intron	0.965	1.00904	0.0117	0.4411		2c
rs10485031	6:37634933	T/G	MDGA1	intron	1.000	1.00190	0.0167	0.9084		7
rs10755699	6:37625562	T/C	MDGA1	intron	0.996	1.00290	0.0158	0.8535		4
rs10807186	6:37624371	A/G	MDGA1	intron	1.000	1.01796	0.0112	0.1132		5
rs10807187	6:37629650	T/G	MDGA1	intron	0.979	1.01633	0.0107	0.1302		6
rs10947686	6:37606805	A/G	MDGA1	intron	1.000	1.01939	0.0106	0.06931		4
rs10947689	6:37615472	A/G	MDGA1	intron	0.965	1.02634	0.0108	0.01638		5
rs10947690	6:37631768	A/G	MDGA1	missense	0.909	0.98748	0.0132	0.3382		7
rs10947691	6:37636647	A/G	MDGA1	intron	0.965	1.00401	0.0107	0.7112		7
rs10947692	6:37644269	A/G	MDGA1	intron	0.965	1.00743	0.0113	0.5163		7
rs10947693	6:37664221	A/G	MDGA1	intron	0.957	1.00642	0.0132	0.629		2b
rs111431657	6:37628233	C/G	MDGA1	intron	0.908	1.04907	0.0509	0.3468		7
rs111536326	6:37605592	T/G	MDGA1	intron,near-gene-3	0.610	0.93819	0.0416	0.1253		3a
rs111571592	6:37640376	A/G	MDGA1	intron	0.908	0.97006	0.0505	0.5471		6
rs111582218	6:37613956	A/G	MDGA1	intron	0.899	0.95399	0.0510	0.3561		5
rs111984547	6:37613747	A/G	MDGA1	intron	0.890	0.95820	0.0511	0.4037		5
rs112132625	6:37630431	A/G	MDGA1	intron	0.908	0.95313	0.0509	0.3466		7
rs112368736	6:37658955	A/G	MDGA1	intron	0.908	1.02439	0.0498	0.6282		6
rs112892344	6:37641129	T/C	MDGA1	intron	0.921	0.97658	0.0511	0.643		6
rs113321242	6:37665467	C/G	MDGA1	near-gene-5,untranslated-5	0.850	0.99392	0.0161	0.7073		4
rs113333629	6:37630600	T/G	MDGA1	intron	0.908	0.95323	0.0509	0.3467		7
rs113608192	6:37611248	A/G	MDGA1	intron	0.874	0.95964	0.0503	0.4131		7
rs113686044	6:37607213	A/T	MDGA1	intron	0.945	0.93267	0.0518	0.1787		5
rs114724293	6:37629682	A/G	MDGA1	intron	0.975	0.95820	0.0442	0.3348		6
rs114762466	6:37660231	T/G	MDGA1	intron	0.885	0.97054	0.0355	0.3999		5
rs115008646	6:37656351	T/C	MDGA1	intron	0.878	0.97015	0.0331	0.3596		5
rs115040875	6:37648779	A/C	MDGA1	intron	0.972	1.01796	0.0189	0.3473		5
rs115426005	6:37635973	A/G	MDGA1	intron	0.998	0.99591	0.0154	0.79		7
rs116227678	6:37646018	A/G	MDGA1	intron	0.926	0.97932	0.0511	0.6824		5
rs116473251	6:37666043	T/C	MDGA1	near-gene-5	0.748	1.00541	0.0243	0.8246		4
rs116499511	6:37617121	T/G	MDGA1	intron,near-gene-3	0.908	0.97200	0.0198	0.1514		5
rs117370647	6:37617657	A/G	MDGA1	intron,untranslated-3	0.956	0.95514	0.0233	0.04883		5
rs11757439	6:37642738	T/C	MDGA1	intron	0.976	0.99860	0.0147	0.9243		7
rs11757704	6:37614479	A/T	MDGA1	intron	0.816	0.90466	0.0576	0.08178		5
rs11961568	6:37648938	T/C	MDGA1	intron	0.896	0.98866	0.0446	0.7988		5
rs11962739	6:37665088	T/C	MDGA1	near-gene-5,untranslated-5	0.934	0.99621	0.0170	0.8229		5
rs11967968	6:37660777	A/G	MDGA1	intron	0.945	0.99990	0.0165	0.9973		7
rs11968296	6:37665900	A/G	MDGA1	near-gene-5	0.913	0.99154	0.0238	0.7213		2b
rs12154114	6:37653483	A/G	MDGA1	intron	0.973	1.02922	0.0193	0.1358		7
rs12190421	6:37652843	T/C	MDGA1	intron	0.969	1.01654	0.0179	0.3583		5
rs12191101	6:37633340	A/G	MDGA1	intron	0.923	1.01908	0.0115	0.09935		4
rs12195277	6:37630253	A/C	MDGA1	intron	1.000	1.01674	0.0112	0.1399		6
rs12198286	6:37633867	T/C	MDGA1	intron	0.973	0.98866	0.0111	0.3039		6
rs12208683	6:37630314	A/T	MDGA1	intron	0.977	0.98462	0.0107	0.147		7
rs12210919	6:37645512	T/C	MDGA1	intron	0.954	0.99045	0.0188	0.6119		5
rs12211370	6:37649344	A/G	MDGA1	intron	0.979	1.01633	0.0189	0.3909		5
rs12524101	6:37649141	T/C	MDGA1	intron	0.949	1.00170	0.0168	0.9184		5
rs12525618	6:37661386	A/G	MDGA1	intron	0.952	0.99382	0.0167	0.7113		3a
rs12529108	6:37649103	T/C	MDGA1	intron	0.950	0.99372	0.0165	0.7023		5
rs12530135	6:37612100	T/C	MDGA1	intron	0.986	0.97961	0.0109	0.05777		5
rs12662703	6:37614369	A/G	MDGA1	intron	0.860	1.04991	0.0466	0.2956		5
rs13195437	6:37649685	T/C	MDGA1	intron	0.996	0.98511	0.0200	0.452		5
rs13196308	6:37646410	A/G	MDGA1	intron	0.920	0.96812	0.0273	0.2355		7
rs13198513	6:37625690	T/C	MDGA1	intron	1.000	0.98255	0.0112	0.1161		5
rs13198650	6:37604673	A/G	MDGA1	untranslated-3	1.000	1.01786	0.0107	0.09788		5
rs13199974	6:37629808	A/G	MDGA1	intron	1.000	0.98098	0.0135	0.1528		6
rs13203140	6:37630133	T/C	MDGA1	intron	0.999	1.01826	0.0112	0.1045		7
rs13204070	6:37623626	T/C	MDGA1	coding-synon	1.000	0.98108	0.0135	0.1551		5
rs13205226	6:37648615	T/C	MDGA1	intron	0.928	1.03159	0.0237	0.1895		5
rs13212859	6:37625777	A/G	MDGA1	intron	1.000	0.98265	0.0112	0.119		5
rs13215128	6:37638202	A/G	MDGA1	intron	0.845	0.90285	0.0446	0.02186		6
rs140710348	6:37606795	A/G	MDGA1	intron	0.612	1.01035	0.0338	0.7605		-
rs142960358	6:37616846	C/G	MDGA1	coding-synon	0.631	1.01379	0.0705	0.8458		-
rs143338725	6:37642607	A/G	MDGA1	intron	0.927	1.01715	0.0368	0.6444		-
rs143891784	6:37611831	A/G	MDGA1	intron	0.800	0.98570	0.0443	0.746		-
rs144435962	6:37613235	C/G	MDGA1	intron	0.815	0.94724	0.0422	0.199		-
rs145837591	6:37634363	T/C	MDGA1	intron	0.871	1.01664	0.0569	0.7714		-
rs146513610	6:37665488	A/G	MDGA1	near-gene-5,untranslated-5	0.750	1.01562	0.0241	0.5194		-
rs147257767	6:37633902	A/T	MDGA1	intron	0.993	0.99780	0.0167	0.8937		-
rs148099713	6:37611775	A/G	MDGA1	intron	0.908	1.04928	0.0513	0.3487		-
rs148256773	6:37615368	C/G	MDGA1	intron	0.736	1.02737	0.0504	0.5911		-
rs148532009	6:37664846	A/G	MDGA1	near-gene-5,untranslated-5	0.873	1.00924	0.0172	0.5947		-
rs1617669	6:37632327	A/G	MDGA1	intron	0.911	0.95361	0.0237	0.04551		7
rs16890045	6:37625389	A/T	MDGA1	intron	0.974	0.96928	0.0422	0.4589		4
rs16890055	6:37630020	T/C	MDGA1	intron	0.989	1.01015	0.0199	0.6137		7
rs16890068	6:37632903	A/G	MDGA1	intron	0.956	0.98758	0.0372	0.7362		6
rs17374592	6:37657542	T/C	MDGA1	intron	0.957	1.00080	0.0168	0.9642		5
rs1738453	6:37600620	A/C	MDGA1	untranslated-3	0.951	0.97648	0.0163	0.143		5
rs1738454	6:37602341	T/C	MDGA1	untranslated-3	0.995	0.99950	0.0182	0.9782		5
rs1738455	6:37603102	T/C	MDGA1	untranslated-3	0.901	0.98896	0.0113	0.3274		6
rs1738456	6:37621097	A/T	MDGA1	intron	0.996	1.02081	0.0130	0.1124		4
rs17578333	6:37656673	A/C	MDGA1	intron	0.701	1.00200	0.0289	0.9457		7
rs17639655	6:37649020	T/C	MDGA1	intron	0.938	1.00070	0.0157	0.9635		5
rs181038136	6:37616187	T/C	MDGA1	intron	0.625	0.97268	0.0550	0.6142		-
rs185153058	6:37665607	C/G	MDGA1	near-gene-5,untranslated-5	0.667	1.06716	0.0372	0.08031		-
rs189505848	6:37632622	C/G	MDGA1	intron	0.845	1.03035	0.0430	0.4876		-
rs189726752	6:37660465	T/C	MDGA1	intron	0.747	0.96358	0.0522	0.4773		-
rs192128153	6:37661875	T/G	MDGA1	intron	0.778	1.01511	0.0603	0.8043		-
rs193136982	6:37664563	A/G	MDGA1	coding-synon	0.780	0.98946	0.0617	0.8631		-
rs1972187	6:37644569	A/G	MDGA1	intron	0.931	0.99442	0.0109	0.6053		6
rs1972188	6:37644621	T/C	MDGA1	intron	0.918	0.98020	0.0132	0.131		7
rs2273109	6:37620129	A/G	MDGA1	intron	0.994	1.02000	0.0115	0.08597		5
rs2273110	6:37626142	T/C	MDGA1	coding-synon	1.000	0.98089	0.0135	0.1506		5
rs2395678	6:37630812	C/G	MDGA1	intron	0.989	0.99094	0.0201	0.6484		7
rs2395679	6:37651885	C/G	MDGA1	intron	0.969	0.99173	0.0108	0.4413		5
rs34833244	6:37601671	C/G	MDGA1	untranslated-3	0.941	0.99661	0.0136	0.8034		5
rs35454763	6:37631863	A/G	MDGA1	coding-synon	0.875	0.96339	0.0504	0.4591		7
rs3778013	6:37606304	T/C	MDGA1	intron	0.987	1.00723	0.0186	0.6982		5
rs3812236	6:37659584	A/G	MDGA1	intron	0.963	0.99293	0.0109	0.5161		5
rs3818020	6:37606305	A/G	MDGA1	intron	0.953	0.97795	0.0180	0.2171		5
rs3846873	6:37619600	A/G	MDGA1	intron	0.994	1.02020	0.0115	0.08171		5
rs3846874	6:37623566	T/C	MDGA1	coding-synon	1.000	1.01786	0.0112	0.1146		5
rs3846875	6:37623885	T/C	MDGA1	intron	0.873	0.99770	0.0171	0.8933		6
rs3846876	6:37624670	T/G	MDGA1	intron	1.000	0.98275	0.0112	0.1197		5
rs3846877	6:37627417	A/G	MDGA1	intron	0.999	0.99840	0.0160	0.9193		5
rs3846878	6:37627990	T/C	MDGA1	intron	0.984	1.02901	0.0108	0.008133		7
rs3846879	6:37628197	A/C	MDGA1	intron	1.000	1.01684	0.0112	0.137		7
rs3846880	6:37633106	A/T	MDGA1	intron	0.856	0.99591	0.0115	0.7186		5
rs3846881	6:37635559	T/C	MDGA1	intron	0.977	1.00461	0.0106	0.6629		2a
rs3846882	6:37635679	A/G	MDGA1	intron	1.000	0.96773	0.0196	0.09346		5
rs3846883	6:37635708	A/G	MDGA1	intron	1.000	1.01076	0.0127	0.4019		5
rs3846884	6:37642788	A/G	MDGA1	intron	0.978	1.01187	0.0110	0.2832		7
rs3857567	6:37624043	A/G	MDGA1	intron	0.996	1.01623	0.0112	0.151		6
rs3857568	6:37624284	T/G	MDGA1	intron	1.000	1.01796	0.0112	0.1133		7
rs3857569	6:37624408	T/C	MDGA1	intron	0.947	0.98620	0.0113	0.2178		5
rs3857570	6:37624409	A/G	MDGA1	intron	0.947	1.01319	0.0113	0.2437		5
rs3857571	6:37630588	A/G	MDGA1	intron	1.000	1.01715	0.0112	0.1298		7
rs3887743	6:37655884	T/C	MDGA1	intron	0.935	1.00020	0.0157	0.9896		5
rs3901254	6:37659300	A/G	MDGA1	intron	0.995	1.01410	0.0167	0.4008		5
rs3905219	6:37609305	T/C	MDGA1	intron	0.968	0.98383	0.0110	0.1373		7
rs4083720	6:37633508	T/C	MDGA1	intron	0.949	0.98876	0.0126	0.3684		5
rs41272234	6:37603037	T/C	MDGA1	untranslated-3	0.813	1.00000	0.0262	0.9997		7
rs41273094	6:37606190	T/G	MDGA1	intron	0.947	1.03717	0.0253	0.1488		5
rs4236056	6:37624753	T/G	MDGA1	intron	1.000	0.98275	0.0112	0.1209		5
rs4236057	6:37628779	A/G	MDGA1	intron	0.999	0.99810	0.0160	0.9069		5
rs4357132	6:37631380	A/C	MDGA1	intron	0.986	1.01857	0.0112	0.1011		5
rs45511994	6:37611796	A/G	MDGA1	intron	0.987	1.02000	0.0108	0.06784		4
rs45539335	6:37611871	A/G	MDGA1	intron	0.939	0.97736	0.0110	0.03646		2c
rs45555536	6:37602816	T/C	MDGA1	untranslated-3	0.896	0.95715	0.0388	0.259		7
rs45611032	6:37604517	T/C	MDGA1	untranslated-3	0.824	1.05432	0.0497	0.2879		5
rs45627433	6:37664482	C/G	MDGA1	intron	0.837	0.99910	0.0203	0.9657		4
rs4711509	6:37629399	A/G	MDGA1	intron	1.010	0.98413	0.0112	0.1548		6
rs4714087	6:37603103	A/G	MDGA1	untranslated-3	0.915	1.01806	0.0111	0.1052		6
rs4714088	6:37610796	A/C	MDGA1	intron	0.989	0.98089	0.0108	0.07535		5
rs4714089	6:37610904	T/C	MDGA1	intron	0.990	1.01949	0.0108	0.07542		7
rs4714090	6:37611200	C/G	MDGA1	intron	0.963	1.01898	0.0109	0.08417		7
rs4714091	6:37643661	A/T	MDGA1	intron	0.976	1.00180	0.0147	0.9008		6
rs4714092	6:37644053	A/C	MDGA1	intron	0.959	0.98196	0.0130	0.1631		7
rs4714093	6:37645697	A/G	MDGA1	intron	0.948	0.99910	0.0170	0.9586		1f
rs4714094	6:37652501	A/G	MDGA1	intron	0.974	1.00602	0.0111	0.5893		5
rs4714095	6:37653940	T/C	MDGA1	intron	0.974	1.00713	0.0111	0.5224		6
rs4714096	6:37658309	T/C	MDGA1	intron	0.896	1.00290	0.0115	0.8		7
rs4714097	6:37658320	T/C	MDGA1	intron	0.914	0.99830	0.0113	0.8805		7
rs4714098	6:37658321	A/G	MDGA1	intron	0.914	1.00190	0.0113	0.8693		7
rs4992764	6:37639187	A/G	MDGA1	intron	0.989	0.98886	0.0110	0.3108		6
rs59744433	6:37651027	T/C	MDGA1	intron	0.959	0.98413	0.0176	0.3648		7
rs60066809	6:37608505	T/C	MDGA1	intron	0.748	0.95447	0.0427	0.2748		5
rs60167914	6:37655080	A/C	MDGA1	intron	0.965	1.01379	0.0180	0.4488		6
rs60312641	6:37649638	A/G	MDGA1	intron	0.946	1.00864	0.0150	0.5653		5
rs61036221	6:37634362	A/G	MDGA1	intron	0.987	0.99810	0.0155	0.9017		5
rs61200844	6:37646452	A/G	MDGA1	intron	0.946	1.00130	0.0170	0.9405		6
rs62398389	6:37607750	T/C	MDGA1	intron	0.967	1.00170	0.0132	0.8953		7
rs62398392	6:37617588	C/G	MDGA1	intron,untranslated-3	0.949	0.98452	0.0329	0.6357		5
rs62398393	6:37619830	A/G	MDGA1	coding-synon	0.953	1.01501	0.0328	0.6487		5
rs62398397	6:37649437	A/G	MDGA1	intron	0.943	0.99302	0.0151	0.6428		5
rs62398399	6:37657675	A/G	MDGA1	intron	0.957	0.99940	0.0168	0.9708		6
rs62398402	6:37665921	A/C	MDGA1	near-gene-5	0.935	1.00592	0.0170	0.7299		2b
rs6458007	6:37634278	A/G	MDGA1	intron	0.998	1.03324	0.0195	0.09371		6
rs6458008	6:37634335	T/C	MDGA1	intron	1.000	0.98847	0.0127	0.3595		5
rs6458009	6:37634813	A/G	MDGA1	intron	1.000	1.03004	0.0198	0.1348		7
rs6458010	6:37640359	T/G	MDGA1	intron	0.967	0.98787	0.0126	0.3299		7
rs6458011	6:37660867	T/C	MDGA1	intron	0.959	1.00672	0.0117	0.5656		6
rs6458012	6:37661041	A/G	MDGA1	intron	0.950	1.00844	0.0116	0.4705		1f
rs66993776	6:37654125	A/G	MDGA1	intron	0.930	1.03884	0.0275	0.165		5
rs6900617	6:37652186	A/G	MDGA1	intron	1.000	0.98295	0.0199	0.3872		5
rs6901281	6:37615258	A/G	MDGA1	intron	0.978	0.97746	0.0108	0.03512		5
rs6903131	6:37633050	A/C	MDGA1	intron	0.959	1.02419	0.0117	0.04103		7
rs6903311	6:37661348	T/C	MDGA1	intron	0.897	1.03728	0.0530	0.4901		4
rs6903430	6:37633044	C/G	MDGA1	intron	0.989	1.01450	0.0124	0.2457		7
rs6903441	6:37633072	A/G	MDGA1	intron	0.964	1.01796	0.0109	0.102		7
rs6906090	6:37619520	T/C	MDGA1	intron	0.998	1.01867	0.0135	0.1713		5
rs6907166	6:37616003	C/G	MDGA1	intron	0.985	0.98610	0.0110	0.2019		5
rs6909816	6:37634174	A/G	MDGA1	intron	0.997	1.03056	0.0199	0.1294		6
rs6911875	6:37629638	A/G	MDGA1	intron	1.000	0.99770	0.0160	0.883		6
rs6912334	6:37643520	T/G	MDGA1	intron	1.000	0.99114	0.0167	0.5936		5
rs6915583	6:37635359	A/G	MDGA1	intron	1.000	1.00300	0.0167	0.8575		4
rs6916856	6:37660117	A/G	MDGA1	intron	0.956	0.99134	0.0113	0.4401		4
rs6922589	6:37627628	T/G	MDGA1	intron	1.000	0.99880	0.0160	0.9423		2b
rs6923200	6:37661216	T/C	MDGA1	intron	0.903	0.96291	0.0532	0.4768		5
rs6924003	6:37624289	T/C	MDGA1	intron	0.958	1.01420	0.0327	0.6662		7
rs6924467	6:37615419	A/T	MDGA1	intron	0.872	1.09264	0.0378	0.01906		5
rs6925749	6:37633024	T/C	MDGA1	intron	0.995	0.98679	0.0124	0.2809		7
rs6926735	6:37599962	T/C	MDGA1	near-gene-3	0.977	1.00622	0.0164	0.7041		5
rs6927074	6:37600120	T/C	MDGA1	near-gene-3	0.972	0.99800	0.0172	0.9079		5
rs6930085	6:37625086	A/G	MDGA1	intron	0.998	0.98010	0.0131	0.123		5
rs6932276	6:37643422	A/G	MDGA1	intron	0.988	0.99810	0.0126	0.8782		5
rs6932664	6:37643373	T/G	MDGA1	intron	1.000	1.00713	0.0168	0.6726		5
rs6936811	6:37656481	A/G	MDGA1	intron	0.996	1.01481	0.0199	0.4607		7
rs6939363	6:37612858	T/C	MDGA1	intron	0.985	0.97941	0.0109	0.05574		5
rs708021	6:37617529	T/C	MDGA1	intron,near-gene-3	0.986	1.02255	0.0131	0.08794		5
rs71569388	6:37608973	T/C	MDGA1	intron	0.797	1.00010	0.0191	0.9942		5
rs72847482	6:37635881	T/G	MDGA1	intron	1.000	0.99810	0.0167	0.9102		7
rs72847488	6:37636933	T/C	MDGA1	intron	0.849	0.97550	0.0189	0.1887		7
rs72847491	6:37637304	T/G	MDGA1	intron	0.997	0.99750	0.0167	0.8812		5
rs72847494	6:37639599	A/G	MDGA1	intron	0.994	0.99710	0.0154	0.8508		6
rs72847500	6:37643909	T/C	MDGA1	intron	0.974	1.00391	0.0167	0.813		5
rs73413362	6:37615844	T/C	MDGA1	intron	0.906	1.00955	0.0168	0.5689		5
rs73415404	6:37638296	T/C	MDGA1	intron	0.946	1.01056	0.0310	0.7351		6
rs73415421	6:37651730	A/C	MDGA1	intron	0.938	1.00020	0.0157	0.992		6
rs73415435	6:37663457	A/C	MDGA1	intron	0.879	0.97258	0.0528	0.5987		5
rs73734225	6:37608372	T/C	MDGA1	intron	0.889	0.94516	0.0500	0.26		7
rs73734235	6:37625038	A/G	MDGA1	intron	0.973	1.03842	0.0423	0.3734		5
rs73734236	6:37626843	A/T	MDGA1	intron	0.973	0.96416	0.0423	0.3886		5
rs73734242	6:37648790	A/C	MDGA1	intron	0.943	0.97365	0.0184	0.1471		5
rs74340695	6:37634860	T/C	MDGA1	intron	0.975	0.99790	0.0348	0.9526		6
rs74404740	6:37615607	A/G	MDGA1	intron	0.828	0.95047	0.0402	0.2061		5
rs7452692	6:37624474	T/C	MDGA1	intron	1.000	1.01776	0.0112	0.1164		5
rs74651976	6:37666943	C/G	MDGA1	near-gene-5	0.870	0.98797	0.0290	0.6775		3a
rs74849102	6:37641458	T/G	MDGA1	intron	0.948	0.98413	0.0372	0.666		5
rs74864809	6:37653886	T/C	MDGA1	intron	0.877	0.96996	0.0331	0.3573		6
rs75051797	6:37641805	T/C	MDGA1	intron	0.948	0.98393	0.0372	0.6634		7
rs75311932	6:37619467	T/C	MDGA1	intron	0.906	0.95323	0.0511	0.3483		5
rs761413	6:37632234	T/C	MDGA1	intron	0.967	0.98334	0.0116	0.146		7
rs76223258	6:37663149	A/C	MDGA1	intron	0.893	0.95667	0.0536	0.4093		5
rs76262911	6:37609773	T/C	MDGA1	intron	0.669	1.04844	0.0557	0.395		5
rs76306252	6:37650273	A/G	MDGA1	intron	0.923	1.00632	0.0413	0.8783		6
rs76563726	6:37631281	A/G	MDGA1	intron	0.958	0.96117	0.0444	0.3727		5
rs76992651	6:37666048	T/G	MDGA1	near-gene-5	0.816	1.00451	0.0199	0.8201		4
rs7738649	6:37657827	A/G	MDGA1	intron	0.969	0.99970	0.0123	0.9785		7
rs7739832	6:37615199	A/G	MDGA1	intron	0.938	0.98383	0.0319	0.6084		5
rs7748388	6:37604608	T/G	MDGA1	untranslated-3	1.000	1.01816	0.0106	0.08915		5
rs77915080	6:37608473	A/G	MDGA1	intron	0.892	1.03541	0.0409	0.3952		7
rs78292279	6:37622798	A/G	MDGA1	intron	0.973	1.04697	0.0443	0.2997		5
rs78956819	6:37622475	A/T	MDGA1	intron	0.956	0.95371	0.0233	0.04239		5
rs79126972	6:37645578	A/G	MDGA1	intron	0.798	0.97883	0.0508	0.6731		5
rs79249337	6:37625726	A/G	MDGA1	intron	0.974	0.95523	0.0443	0.3017		5
rs79359497	6:37636347	T/C	MDGA1	intron	0.975	0.99770	0.0348	0.9481		5
rs79589922	6:37631935	A/T	MDGA1	intron	0.938	1.03417	0.0433	0.4381		7
rs79632896	6:37634560	T/C	MDGA1	intron	0.827	1.11795	0.0476	0.01909		6
rs79792089	6:37605932	A/G	MDGA1	intron,missense	0.946	0.93202	0.0518	0.1742		3a
rs79879161	6:37658898	C/G	MDGA1	intron	0.886	0.96551	0.0492	0.4756		7
rs80161177	6:37645437	T/C	MDGA1	intron	0.710	0.99243	0.0488	0.8767		6
rs804816	6:37618202	A/G	MDGA1	intron	0.990	1.02092	0.0130	0.1121		5
rs804817	6:37618270	C/G	MDGA1	intron	0.985	0.98147	0.0123	0.1277		5
rs804828	6:37608014	T/C	MDGA1	intron	0.952	0.99950	0.0178	0.9796		5
rs804830	6:37609457	C/G	MDGA1	intron	0.967	1.01379	0.0119	0.2487		5
rs804831	6:37609741	T/C	MDGA1	intron	0.972	1.01623	0.0118	0.1739		5
rs804839	6:37603513	A/G	MDGA1	untranslated-3	0.989	1.01056	0.0113	0.3525		4
rs804840	6:37603535	T/C	MDGA1	untranslated-3	0.967	1.01349	0.0159	0.399		5
rs804841	6:37604489	A/G	MDGA1	untranslated-3	0.966	0.98679	0.0159	0.4026		5
rs804857	6:37612626	T/C	MDGA1	intron	0.940	1.01217	0.0317	0.7024		5
rs804858	6:37613592	A/G	MDGA1	intron	0.941	1.01177	0.0316	0.7108		5
rs804859	6:37614462	T/C	MDGA1	intron	0.971	0.97873	0.0116	0.06452		5
rs876796	6:37647644	T/C	MDGA1	intron	0.951	0.98472	0.0131	0.2411		4
rs881392	6:37646571	A/G	MDGA1	intron	0.945	1.01359	0.0114	0.2351		6
rs910210	6:37647135	A/G	MDGA1	intron	0.961	1.02357	0.0192	0.2245		7
rs9296229	6:37636354	T/C	MDGA1	intron	1.000	0.98866	0.0127	0.3688		5
rs9296230	6:37636600	T/C	MDGA1	intron	0.987	0.96590	0.0205	0.09151		7
rs9296231	6:37636716	T/C	MDGA1	intron	1.000	0.98866	0.0127	0.3684		7
rs9349050	6:37663624	T/C	MDGA1	intron	0.952	0.99631	0.0108	0.7343		5
rs9357251	6:37653403	T/G	MDGA1	intron	0.957	0.98916	0.0110	0.3236		6
rs9366943	6:37602406	A/C	MDGA1	untranslated-3	0.977	1.00965	0.0186	0.6064		5
rs9366945	6:37626806	C/G	MDGA1	intron	1.000	0.98196	0.0135	0.1764		5
rs9369015	6:37622860	A/G	MDGA1	intron	0.998	0.98030	0.0130	0.1253		5
rs9369016	6:37641152	A/G	MDGA1	intron	0.999	0.99094	0.0168	0.5873		6
rs9369017	6:37652872	A/G	MDGA1	intron	0.939	0.99223	0.0110	0.4782		5
rs9380696	6:37600774	T/G	MDGA1	untranslated-3	0.972	1.00723	0.0178	0.6834		5
rs9380697	6:37604885	A/G	MDGA1	untranslated-3	0.977	1.00511	0.0128	0.6892		5
rs9380698	6:37616495	A/C	MDGA1	intron	0.963	1.01816	0.0108	0.09445		2b
rs9380699	6:37653641	T/C	MDGA1	intron	1.000	1.01613	0.0199	0.4227		5
rs9394445	6:37607290	A/G	MDGA1	intron	0.981	0.99820	0.0131	0.8917		5
rs9394447	6:37631011	T/C	MDGA1	intron	0.998	0.98059	0.0135	0.1465		5
rs9394448	6:37640975	C/G	MDGA1	intron	0.996	1.01501	0.0168	0.3735		7
rs9394449	6:37648727	A/G	MDGA1	intron	0.946	0.98108	0.0134	0.1562		5
rs9394450	6:37648812	A/C	MDGA1	intron	0.955	0.98728	0.0113	0.258		5
rs9394451	6:37655781	T/C	MDGA1	intron	0.997	0.98432	0.0199	0.4283		7
rs9394452	6:37655800	T/C	MDGA1	intron	0.997	0.98432	0.0199	0.4284		7
rs9462339	6:37610244	A/G	MDGA1	intron	0.986	1.01928	0.0109	0.07817		6
rs9462340	6:37610349	A/G	MDGA1	intron	0.988	1.01918	0.0108	0.07927		7
rs9462341	6:37611381	A/T	MDGA1	intron	0.988	0.98059	0.0108	0.07		6
rs9462343	6:37620776	A/G	MDGA1	intron	0.996	0.98020	0.0130	0.1235		5
rs9462346	6:37639948	T/C	MDGA1	intron	0.998	1.02963	0.0199	0.1419		7
rs9462353	6:37666492	T/C	MDGA1	near-gene-5	0.933	1.00914	0.0168	0.5882		4
rs9470656	6:37633552	A/C	MDGA1	intron	0.964	1.00040	0.0344	0.9904		7
rs9470657	6:37633583	A/C	MDGA1	intron	0.969	1.00240	0.0343	0.9436		7
rs9470660	6:37650091	T/C	MDGA1	intron	0.937	1.00070	0.0156	0.9619		7
rs9470665	6:37654454	T/C	MDGA1	intron	0.955	0.99611	0.0112	0.7253		7
rs9470668	6:37657430	A/G	MDGA1	intron	0.975	1.00020	0.0121	0.9882		2b
rs989713	6:37649711	T/C	MDGA1	intron	0.955	1.01867	0.0133	0.1642		5
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information