MAN2A2

Basic Information

Gene Symbol	MAN2A2
Entrez Id	4122
Position	chr15:91447420..91465815
Description	mannosidase, alpha, class 2A, member 2
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs11073957	15:91444573	T/G	MAN2A2	near-gene-5	0.906	1.02624	0.0115	0.02465		5
rs11073958	15:91450524	A/G	MAN2A2	intron	0.937	1.03925	0.0320	0.2291		2b
rs112194177	15:91446922	A/G	MAN2A2	intron,near-gene-5	0.777	1.03179	0.0650	0.6304		4
rs113316526	15:91465770	A/G	MAN2A2	untranslated-3	0.668	0.97785	0.0492	0.6494		5
rs113405020	15:91443992	A/G	MAN2A2	near-gene-5	0.664	1.01582	0.0136	0.2505		7
rs113584386	15:91448005	A/C	MAN2A2	intron	0.873	0.94592	0.0347	0.1091		5
rs116299775	15:91445276	T/C	MAN2A2	near-gene-5	0.777	1.03666	0.0654	0.5814		3a
rs11630752	15:91449810	A/G	MAN2A2	intron	0.636	1.08026	0.0435	0.07566		5
rs117550559	15:91458985	A/G	MAN2A2	intron	0.818	1.08828	0.0455	0.06289		5
rs11856281	15:91444375	A/G	MAN2A2	near-gene-5	0.825	1.02398	0.0126	0.06013		6
rs12437758	15:91444476	T/C	MAN2A2	near-gene-5	0.894	1.02665	0.0117	0.02387		6
rs12439805	15:91447899	A/C	MAN2A2	intron	0.904	0.95983	0.0322	0.2031		5
rs12441618	15:91444046	T/C	MAN2A2	near-gene-5	0.678	1.00250	0.0130	0.8502		6
rs12591833	15:91449760	C/G	MAN2A2	intron	0.928	0.96310	0.0322	0.243		5
rs12594307	15:91449702	A/T	MAN2A2	coding-synon,ncRNA	0.927	0.96242	0.0322	0.234		5
rs1266488	15:91458552	T/C	MAN2A2	intron	0.902	0.94914	0.0302	0.08388		5
rs1266489	15:91458485	A/G	MAN2A2	intron	0.991	0.96657	0.0113	0.002535		5
rs1266490	15:91457220	C/G	MAN2A2	intron	0.943	0.96986	0.0113	0.006686		5
rs1266492	15:91456102	T/C	MAN2A2	intron	0.986	1.04091	0.0119	0.0007794		1f
rs1266495	15:91454571	T/C	MAN2A2	intron	0.936	0.94753	0.0308	0.07999		5
rs12909056	15:91459475	A/G	MAN2A2	ncRNA,missense	0.985	1.00160	0.0203	0.9367		5
rs12915571	15:91451966	T/C	MAN2A2	intron	0.815	1.00310	0.0378	0.9341		6
rs140404658	15:91455455	T/C	MAN2A2	coding-synon,ncRNA	0.653	1.01715	0.0529	0.7476		-
rs143056962	15:91446225	T/C	MAN2A2	intron,near-gene-5	0.776	1.00622	0.0444	0.8895		-
rs150063647	15:91451919	T/C	MAN2A2	intron	0.683	1.07595	0.0424	0.08403		-
rs17593311	15:91461154	C/G	MAN2A2	intron	0.656	0.95973	0.0517	0.4263		5
rs17635872	15:91460302	T/C	MAN2A2	intron	0.975	1.05001	0.0121	0.0000533		5
rs182598519	15:91445949	A/G	MAN2A2	intron,near-gene-5	0.695	1.07004	0.0337	0.04468		-
rs2072077	15:91449654	T/C	MAN2A2	coding-synon,ncRNA	0.927	0.96041	0.0322	0.2089		5
rs2072078	15:91449015	A/G	MAN2A2	intron	0.978	1.04446	0.0118	0.000224		7
rs2106673	15:91452595	A/G	MAN2A2	ncRNA,missense	0.990	1.04019	0.0119	0.0009011		5
rs2238340	15:91447686	A/G	MAN2A2	intron	0.972	0.95753	0.0119	0.0002678		2b
rs2239293	15:91450350	A/G	MAN2A2	intron	0.982	0.95820	0.0118	0.0002848		5
rs2239294	15:91450248	A/T	MAN2A2	intron	0.924	0.96041	0.0310	0.1917		5
rs2677744	15:91450441	A/G	MAN2A2	intron	0.978	0.96831	0.0112	0.004187		1f
rs2677748	15:91452836	T/C	MAN2A2	intron	0.894	1.04728	0.0126	0.0002406		5
rs2677749	15:91452865	A/G	MAN2A2	intron	0.949	1.03417	0.0114	0.003056		5
rs34128242	15:91444340	A/G	MAN2A2	near-gene-5	0.682	1.02306	0.0357	0.5239		7
rs34141725	15:91459657	T/C	MAN2A2	intron	0.985	1.00230	0.0204	0.9101		5
rs34970738	15:91465649	T/C	MAN2A2	untranslated-3	0.803	0.99352	0.0362	0.8576		5
rs35968052	15:91461824	T/C	MAN2A2	intron	0.986	1.00150	0.0204	0.9408		5
rs3784779	15:91453131	T/C	MAN2A2	intron	0.986	0.95782	0.0117	0.0002259		7
rs4932180	15:91459981	A/G	MAN2A2	intron	0.908	1.05327	0.0328	0.1136		5
rs4932377	15:91459925	A/G	MAN2A2	intron	0.908	1.05306	0.0328	0.1149		5
rs61746323	15:91465224	T/C	MAN2A2	untranslated-3	0.987	1.00050	0.0201	0.9784		4
rs6496737	15:91455618	T/C	MAN2A2	intron	0.978	0.95399	0.0118	0.00006884		5
rs71407343	15:91445234	T/C	MAN2A2	near-gene-5	0.867	0.99461	0.0245	0.8265		2a
rs71407344	15:91445976	T/G	MAN2A2	intron,near-gene-5	0.774	0.99382	0.0342	0.855		4
rs71407345	15:91448166	T/C	MAN2A2	intron	0.949	0.99452	0.0207	0.7896		3a
rs71407346	15:91454837	T/C	MAN2A2	intron	0.963	1.00230	0.0206	0.9116		5
rs71407347	15:91455960	T/G	MAN2A2	intron	0.965	1.00441	0.0206	0.83		4
rs7184022	15:91447867	T/G	MAN2A2	intron	0.959	1.04582	0.0120	0.0001809		5
rs72630484	15:91458406	C/G	MAN2A2	intron	0.898	0.94838	0.0324	0.102		5
rs72755399	15:91443960	A/G	MAN2A2	near-gene-5	0.735	1.02041	0.0130	0.1197		7
rs74470807	15:91450236	A/G	MAN2A2	intron	0.659	1.03873	0.0329	0.2478		5
rs75521846	15:91449962	T/C	MAN2A2	intron	0.748	0.90023	0.0337	0.001845		4
rs80163910	15:91455458	T/C	MAN2A2	coding-synon,ncRNA	0.881	1.05971	0.0343	0.09117		5
rs877285	15:91452204	A/G	MAN2A2	intron	0.990	1.03998	0.0119	0.0009532		7
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information