LZTS1

Basic Information

Gene Symbol	LZTS1
Entrez Id	11178
Position	chr8:20103676..20112803
Description	leucine zipper, putative tumor suppressor 1
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10086667	8:20156565	T/C	LZTS1	intron	0.955	1.02357	0.0109	0.03327		5
rs10111188	8:20155901	A/T	LZTS1	intron	0.949	0.97844	0.0110	0.04845		7
rs112378058	8:20121827	A/T	LZTS1	intron	0.971	1.00511	0.0432	0.9066		5
rs112588051	8:20158140	A/G	LZTS1	intron	0.845	1.00813	0.0566	0.8863		7
rs112971957	8:20123575	T/C	LZTS1	intron	0.899	1.01694	0.0251	0.5036		7
rs114394012	8:20122947	C/G	LZTS1	intron	0.932	1.02429	0.0403	0.5527		7
rs114769971	8:20160907	A/C	LZTS1	intron	0.866	0.96522	0.0581	0.5423		4
rs116167598	8:20151367	A/G	LZTS1	intron	0.848	1.00361	0.0551	0.9478		7
rs117044007	8:20154392	T/G	LZTS1	intron	0.656	0.97365	0.0409	0.5132		4
rs117357263	8:20113550	T/C	LZTS1	intron,near-gene-5	0.816	0.99134	0.0233	0.7104		6
rs11785350	8:20103852	T/C	LZTS1	untranslated-3	0.723	1.00220	0.0267	0.9339		5
rs11785891	8:20130868	A/G	LZTS1	intron	0.984	0.98639	0.0107	0.2012		3a
rs118150563	8:20148660	A/G	LZTS1	intron	0.921	1.01157	0.0401	0.7739		5
rs13259502	8:20125007	A/T	LZTS1	intron	0.977	1.01481	0.0121	0.2255		5
rs13259742	8:20120139	T/G	LZTS1	intron	0.958	1.00050	0.0122	0.9685		5
rs13260298	8:20120297	T/C	LZTS1	intron	0.886	0.98659	0.0189	0.4753		5
rs13266645	8:20125176	A/G	LZTS1	intron	0.965	1.00854	0.0115	0.4606		6
rs141962445	8:20122741	T/C	LZTS1	intron	0.824	1.01572	0.0403	0.6975		-
rs142324523	8:20114828	A/G	LZTS1	intron	0.697	1.01086	0.0317	0.7337		-
rs143470002	8:20111138	A/G	LZTS1	intron	0.715	1.03925	0.0658	0.5579		-
rs143525031	8:20106094	A/G	LZTS1	untranslated-3	0.724	0.97181	0.0551	0.6037		-
rs144878357	8:20116932	T/C	LZTS1	intron	0.855	0.99850	0.0416	0.9715		-
rs146678129	8:20111168	A/G	LZTS1	intron	0.655	0.97990	0.0536	0.7054		-
rs147150728	8:20157945	A/G	LZTS1	intron	0.915	1.01066	0.0181	0.5601		-
rs148031435	8:20161025	T/C	LZTS1	intron	0.866	0.96647	0.0582	0.5575		-
rs148101303	8:20157189	T/G	LZTS1	intron	0.849	1.05475	0.0509	0.2954		-
rs1497018	8:20127576	A/G	LZTS1	intron	0.992	0.98827	0.0122	0.3339		7
rs1542827	8:20129465	A/G	LZTS1	intron	0.981	1.01369	0.0130	0.2941		5
rs17092192	8:20121441	T/C	LZTS1	intron	0.928	0.99661	0.0124	0.7864		5
rs181587393	8:20157998	C/G	LZTS1	intron	0.877	1.00210	0.0196	0.9141		-
rs185312922	8:20161292	T/C	LZTS1	untranslated-5	0.657	0.96185	0.0551	0.4797		-
rs187604712	8:20119342	A/G	LZTS1	intron	0.820	1.00924	0.0555	0.8681		-
rs189083297	8:20125683	T/C	LZTS1	intron	0.658	0.98955	0.0425	0.8055		-
rs190458112	8:20112951	C/G	LZTS1	intron,near-gene-5	0.751	1.01969	0.0500	0.6966		-
rs2410635	8:20126852	C/G	LZTS1	intron	0.966	0.98708	0.0108	0.2269		5
rs2410640	8:20129656	A/G	LZTS1	intron	0.979	1.02235	0.0326	0.4983		5
rs2453910	8:20108580	T/C	LZTS1	intron	0.991	1.00773	0.0134	0.566		5
rs2645384	8:20109363	A/G	LZTS1	intron	0.998	0.98541	0.0108	0.1745		5
rs2645385	8:20110219	A/G	LZTS1	intron	0.991	0.98649	0.0110	0.2163		5
rs2645386	8:20110641	T/C	LZTS1	coding-synon,intron	0.995	0.98699	0.0110	0.2329		5
rs2645387	8:20111286	A/G	LZTS1	intron	0.996	1.01369	0.0110	0.2159		5
rs2645388	8:20111812	A/G	LZTS1	intron	0.992	1.01379	0.0111	0.218		5
rs2645391	8:20108093	A/C	LZTS1	intron	0.943	0.99005	0.0332	0.7638		5
rs2645392	8:20108131	A/T	LZTS1	intron	0.993	0.98669	0.0111	0.2259		5
rs2735950	8:20109354	A/G	LZTS1	intron	1.000	0.99104	0.0138	0.5152		5
rs28552881	8:20149899	A/G	LZTS1	intron	0.967	1.02020	0.0114	0.08084		5
rs28590363	8:20149861	A/G	LZTS1	intron	0.965	0.98147	0.0114	0.1022		5
rs28690412	8:20150177	A/G	LZTS1	intron	0.967	0.98206	0.0113	0.11		5
rs2935312	8:20109187	A/C	LZTS1	intron	0.999	0.98639	0.0110	0.2097		5
rs34399646	8:20111481	A/G	LZTS1	intron	0.964	0.99681	0.0304	0.9172		5
rs34608025	8:20120440	T/C	LZTS1	intron	0.783	0.99950	0.0413	0.9907		5
rs35053302	8:20110665	A/G	LZTS1	coding-synon,intron	0.814	0.96368	0.0347	0.2864		5
rs35103297	8:20111004	A/G	LZTS1	coding-synon,intron	0.986	1.00592	0.0406	0.8852		5
rs4244461	8:20128109	A/G	LZTS1	intron	0.970	0.97716	0.0327	0.4803		5
rs4436141	8:20128078	T/C	LZTS1	intron	0.992	1.01582	0.0119	0.1886		5
rs4598258	8:20128123	A/T	LZTS1	intron	0.986	0.98531	0.0119	0.2153		5
rs4921697	8:20116621	T/C	LZTS1	intron	0.999	1.00803	0.0107	0.4517		7
rs4921698	8:20116942	C/G	LZTS1	intron	0.994	1.00763	0.0133	0.5698		7
rs4922142	8:20114519	C/G	LZTS1	intron,near-gene-5	0.994	1.00874	0.0139	0.5315		7
rs4922143	8:20115282	A/G	LZTS1	intron	0.987	1.00874	0.0139	0.532		6
rs4922144	8:20117761	A/G	LZTS1	intron	0.978	0.99332	0.0107	0.5323		6
rs4922145	8:20130379	T/G	LZTS1	intron	0.994	1.01908	0.0244	0.4391		7
rs4922146	8:20130816	A/G	LZTS1	intron	0.994	1.01918	0.0244	0.4346		4
rs4922155	8:20153776	T/C	LZTS1	intron	0.977	1.02214	0.0114	0.05505		5
rs4922156	8:20153950	A/G	LZTS1	intron	0.988	1.02132	0.0167	0.2051		7
rs58366232	8:20120741	A/G	LZTS1	intron	0.871	0.99531	0.0222	0.8328		5
rs59995861	8:20106076	T/C	LZTS1	untranslated-3	0.949	0.98000	0.0373	0.5887		5
rs62499970	8:20121766	T/C	LZTS1	intron	0.933	0.99720	0.0125	0.8223		6
rs62499971	8:20125115	T/C	LZTS1	intron	0.953	0.99402	0.0138	0.6648		6
rs62499972	8:20129828	A/G	LZTS1	intron	0.982	0.99005	0.0136	0.4615		6
rs62499973	8:20131277	C/G	LZTS1	intron	0.984	1.01136	0.0136	0.404		5
rs6586900	8:20114102	T/C	LZTS1	intron,near-gene-5	0.990	0.98946	0.0111	0.3364		7
rs6586903	8:20158708	T/C	LZTS1	intron	0.982	1.02143	0.0167	0.2041		7
rs66871127	8:20119114	A/C	LZTS1	intron	0.755	1.00110	0.0199	0.9567		5
rs67109150	8:20128497	T/G	LZTS1	intron	0.967	1.01959	0.0247	0.4316		5
rs67777401	8:20129780	T/C	LZTS1	intron	0.984	1.01928	0.0244	0.4354		5
rs6986009	8:20159253	C/G	LZTS1	intron	0.954	0.97658	0.0110	0.03063		5
rs6986711	8:20157383	A/G	LZTS1	intron	0.948	1.02030	0.0110	0.0675		5
rs6990085	8:20157016	A/T	LZTS1	intron	0.954	0.97756	0.0109	0.03813		5
rs7015008	8:20122203	A/G	LZTS1	intron	0.931	1.00050	0.0128	0.9678		5
rs729361	8:20129995	T/C	LZTS1	intron	0.982	0.98985	0.0107	0.3403		5
rs73214084	8:20120326	T/C	LZTS1	intron	0.777	1.11204	0.0627	0.09066		5
rs73603996	8:20104243	A/G	LZTS1	untranslated-3	0.949	0.98206	0.0373	0.6267		5
rs73604002	8:20106406	T/C	LZTS1	untranslated-3	0.952	0.97619	0.0369	0.5142		5
rs73605915	8:20109110	T/G	LZTS1	intron	0.959	0.98030	0.0370	0.5902		5
rs73607942	8:20111303	T/C	LZTS1	intron	0.960	0.98334	0.0368	0.6471		5
rs73607943	8:20111600	A/G	LZTS1	intron	0.959	1.01704	0.0368	0.6466		5
rs73607945	8:20112824	C/G	LZTS1	near-gene-5,untranslated-5	0.955	0.98324	0.0368	0.6463		5
rs73607954	8:20118392	T/C	LZTS1	intron	0.919	1.01806	0.0375	0.6325		5
rs73607959	8:20121210	A/G	LZTS1	intron	0.888	0.99273	0.0224	0.7439		5
rs73607971	8:20129346	T/C	LZTS1	intron	0.980	1.01837	0.0245	0.4576		5
rs73669752	8:20104905	T/G	LZTS1	untranslated-3	0.965	0.97258	0.0333	0.4039		5
rs73669755	8:20113830	T/C	LZTS1	intron,near-gene-5	0.984	1.00391	0.0407	0.9236		5
rs74760679	8:20150770	A/G	LZTS1	intron	0.732	0.94242	0.0569	0.2979		5
rs75828631	8:20117476	A/G	LZTS1	intron	0.977	1.00793	0.0406	0.8451		7
rs76392058	8:20148707	T/C	LZTS1	intron	0.724	1.06535	0.0397	0.1112		5
rs76667939	8:20158805	T/C	LZTS1	intron	0.914	1.01207	0.0181	0.5076		5
rs76689097	8:20157606	A/G	LZTS1	intron	0.743	0.97443	0.0544	0.6343		5
rs76978627	8:20130991	T/G	LZTS1	intron	0.771	1.09068	0.0660	0.1884		4
rs77162288	8:20149365	A/C	LZTS1	intron	0.717	0.94450	0.0574	0.3199		5
rs77388031	8:20155544	T/C	LZTS1	intron	0.917	1.01106	0.0181	0.5442		6
rs77626788	8:20150072	C/G	LZTS1	intron	0.914	0.98817	0.0181	0.5131		6
rs77646768	8:20161329	T/C	LZTS1	untranslated-5	0.659	0.97638	0.0438	0.5856		4
rs77837030	8:20154303	C/G	LZTS1	intron	0.851	1.00100	0.0555	0.9849		3a
rs78061763	8:20153380	A/G	LZTS1	intron	0.733	0.94148	0.0568	0.2882		5
rs7835387	8:20150536	T/C	LZTS1	intron	0.979	0.97814	0.0114	0.05202		6
rs78620898	8:20126617	T/C	LZTS1	intron	0.819	0.98020	0.0323	0.5373		4
rs78730141	8:20109323	A/G	LZTS1	intron	0.965	1.01532	0.0365	0.6776		5
rs78861625	8:20149908	T/G	LZTS1	intron	0.724	0.94365	0.0572	0.3107		5
rs79573082	8:20155237	A/G	LZTS1	intron	0.883	1.01015	0.0198	0.608		6
rs79798618	8:20109109	T/C	LZTS1	intron	0.655	0.97990	0.0539	0.7062		5
rs868223	8:20151095	A/G	LZTS1	intron	0.972	0.98030	0.0114	0.08073		5
rs900957	8:20151211	A/G	LZTS1	intron	0.979	0.97863	0.0114	0.05751		7
rs903998	8:20109492	T/G	LZTS1	intron	1.000	0.99223	0.0138	0.571		5
rs903999	8:20109809	A/G	LZTS1	intron	0.994	0.99114	0.0106	0.4027		5
rs904000	8:20109880	T/C	LZTS1	intron	0.985	1.00803	0.0108	0.4614		5
rs904002	8:20106874	A/G	LZTS1	untranslated-3	0.992	1.00612	0.0136	0.6518		5
rs923057	8:20152143	A/G	LZTS1	intron	0.952	0.97912	0.0110	0.05524		5
rs953074	8:20126927	A/G	LZTS1	intron	0.964	0.98659	0.0108	0.2086		5
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information