LINC00933

Basic Information

Gene Symbol	LINC00933
Entrez Id	100506874
Position	chr15:85113880..85123412
Description	long intergenic non-protein coding RNA 933
Gene type	ncRNA

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs112353795	15:85118093	T/C	LINC00933	intron	0.869	0.97074	0.0430	0.4898		7
rs116935008	15:85115210	A/G	LINC00933	intron,near-gene-5	0.866	0.95993	0.0312	0.1901		6
rs12899953	15:85114547	T/C	LINC00933	intron,near-gene-5	0.923	1.07691	0.0128	7.88E-9		3a
rs17597076	15:85115935	A/G	LINC00933	intron,near-gene-5	0.953	0.99154	0.0183	0.6421		6
rs2341186	15:85118128	A/G	LINC00933	intron	0.986	0.99243	0.0159	0.6303		6
rs36090723	15:85118307	C/G	LINC00933	intron	0.989	1.07799	0.0120	3.989E-10		7
rs62021166	15:85116794	A/G	LINC00933	intron	0.986	0.92793	0.0120	5.157E-10		7
rs62021167	15:85118051	A/T	LINC00933	intron	0.989	0.92793	0.0120	4.636E-10		7
rs62021169	15:85120402	A/G	LINC00933	intron	0.934	0.98580	0.0352	0.6856		6
rs71395454	15:85116522	T/G	LINC00933	intron	0.871	1.03852	0.0574	0.5103		7
rs72750837	15:85115641	C/G	LINC00933	intron,near-gene-5	0.968	0.96493	0.0204	0.08072		5
rs895571	15:85117153	A/C	LINC00933	intron	0.987	0.97035	0.0117	0.009777		7
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information