LARS

Basic Information

Gene Symbol	LARS
Entrez Id	51520
Position	chr5:145492589..145562294
Description	leucyl-tRNA synthetase
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10515564	5:145511921	A/G	LARS	intron	1.000	1.00582	0.0116	0.617		7
rs11167932	5:145513407	T/C	LARS	intron	1.000	0.99422	0.0116	0.6175		6
rs111843158	5:145514670	A/G	LARS	intron	0.965	0.99611	0.0213	0.855		7
rs112509375	5:145516246	T/C	LARS	intron	0.957	1.00250	0.0209	0.9036		7
rs112888218	5:145519167	A/G	LARS	intron	0.802	1.03314	0.0157	0.03835		7
rs113054461	5:145555168	A/C	LARS	intron	0.659	1.11338	0.0568	0.05853		7
rs114726414	5:145515151	A/G	LARS	intron	0.656	1.16137	0.0691	0.03036		6
rs114780888	5:145553117	A/T	LARS	intron	0.848	1.00813	0.0212	0.7005		6
rs11540215	5:145562143	A/G	LARS	untranslated-5	0.996	1.00491	0.0117	0.6736		4
rs11540216	5:145506100	A/G	LARS	coding-synon	0.975	0.99750	0.0213	0.9051		5
rs116041061	5:145512975	T/C	LARS	intron	0.953	0.98886	0.0283	0.6931		7
rs116089408	5:145511323	C/G	LARS	intron	0.954	1.00995	0.0283	0.7261		7
rs116294253	5:145501417	A/G	LARS	intron	0.746	1.01521	0.0306	0.623		7
rs11948180	5:145528330	A/G	LARS	intron	1.000	1.00572	0.0116	0.6228		6
rs11948314	5:145528856	A/G	LARS	intron	1.000	1.00572	0.0116	0.6231		7
rs11949351	5:145557388	C/G	LARS	intron	0.997	0.99481	0.0117	0.6543		7
rs11949703	5:145552692	T/C	LARS	intron	1.000	1.00572	0.0117	0.6253		4
rs11951553	5:145519948	T/C	LARS	intron	1.000	1.00582	0.0116	0.6183		7
rs11952228	5:145551987	A/G	LARS	intron	0.997	0.99541	0.0117	0.6916		7
rs11952281	5:145520141	T/C	LARS	intron	0.947	1.00823	0.0122	0.5039		7
rs11952340	5:145520274	T/C	LARS	intron	0.960	1.00723	0.0121	0.5507		6
rs11953517	5:145509573	A/G	LARS	intron	1.000	1.00612	0.0117	0.6023		7
rs11954083	5:145513188	A/G	LARS	intron	1.000	0.99382	0.0117	0.5953		6
rs11954750	5:145513085	T/G	LARS	intron	1.000	0.99422	0.0116	0.6175		7
rs11954870	5:145528454	T/C	LARS	intron	1.000	1.00572	0.0116	0.6227		7
rs11954923	5:145528625	T/C	LARS	intron	1.000	1.00572	0.0116	0.6229		6
rs11954977	5:145528776	T/C	LARS	intron	1.000	1.00572	0.0116	0.6231		7
rs11955557	5:145554508	T/C	LARS	intron	0.972	0.99422	0.0119	0.6259		7
rs11955635	5:145520137	A/G	LARS	intron	0.970	0.99442	0.0120	0.6392		7
rs11955695	5:145520275	A/G	LARS	intron	0.960	0.99283	0.0121	0.551		6
rs11957830	5:145554457	A/G	LARS	intron	0.995	1.00592	0.0117	0.6165		7
rs11957888	5:145554651	A/G	LARS	intron	0.997	1.00521	0.0117	0.6541		7
rs11958630	5:145520186	T/G	LARS	intron	0.963	1.00602	0.0120	0.6168		6
rs11959805	5:145516105	A/G	LARS	intron	1.000	1.00572	0.0116	0.6251		6
rs12153109	5:145515346	T/C	LARS	intron	1.000	1.00582	0.0116	0.6206		7
rs12153238	5:145513647	A/T	LARS	intron	1.000	0.99422	0.0116	0.6175		7
rs13153675	5:145535347	C/G	LARS	intron	1.000	1.00491	0.0117	0.6717		7
rs13154547	5:145545881	A/C	LARS	intron	1.000	1.00531	0.0116	0.6483		7
rs13157279	5:145559173	T/C	LARS	intron	0.997	0.99481	0.0117	0.6541		6
rs13159380	5:145560697	A/T	LARS	intron	0.997	0.99481	0.0117	0.6541		7
rs13161036	5:145557993	A/G	LARS	intron	0.986	1.00582	0.0118	0.6209		6
rs13161075	5:145524401	C/G	LARS	intron	1.000	1.00582	0.0116	0.6202		7
rs13161659	5:145507827	T/C	LARS	intron	1.000	0.99422	0.0116	0.6186		6
rs13164882	5:145530434	A/G	LARS	intron	1.000	1.00572	0.0116	0.6238		6
rs13171596	5:145559214	T/C	LARS	intron	0.985	1.00461	0.0118	0.6938		7
rs13171828	5:145501636	T/C	LARS	intron	0.999	1.00572	0.0116	0.6238		7
rs13172010	5:145519331	C/G	LARS	intron	0.972	1.00521	0.0119	0.6651		7
rs13176784	5:145560831	A/G	LARS	intron	0.995	1.00471	0.0117	0.6876		6
rs13176915	5:145560876	A/G	LARS	intron	0.997	1.00531	0.0117	0.6524		7
rs13178370	5:145535305	T/C	LARS	intron	1.000	0.99442	0.0116	0.6328		7
rs13178516	5:145538924	A/T	LARS	intron	1.000	1.00541	0.0116	0.643		7
rs13178755	5:145555966	C/G	LARS	intron	0.985	1.00471	0.0118	0.6931		7
rs13178840	5:145505484	T/G	LARS	intron	1.000	0.99402	0.0117	0.6068		7
rs13179517	5:145555812	T/C	LARS	intron	0.985	1.00481	0.0118	0.6867		7
rs13180113	5:145536642	A/G	LARS	intron	1.000	0.99452	0.0116	0.6371		7
rs13182567	5:145539123	A/T	LARS	intron	1.000	1.00541	0.0116	0.6438		7
rs13184702	5:145516528	A/G	LARS	intron	1.000	1.00582	0.0116	0.6177		7
rs13185805	5:145516471	T/C	LARS	intron	0.998	1.00572	0.0117	0.6279		6
rs138039555	5:145555124	T/C	LARS	intron	0.973	0.99541	0.0214	0.8289		-
rs1395277	5:145506248	T/C	LARS	intron	1.000	1.00582	0.0116	0.6183		5
rs142608102	5:145525482	T/G	LARS	intron	0.706	0.95256	0.0663	0.4633		-
rs143326019	5:145560872	T/C	LARS	intron	0.977	0.99551	0.0213	0.8313		-
rs143462164	5:145520991	A/G	LARS	intron	0.618	1.01501	0.0576	0.7964		-
rs144322464	5:145553996	A/G	LARS	intron	0.974	0.99263	0.0119	0.5324		-
rs145903171	5:145534479	T/C	LARS	intron	1.000	0.99442	0.0116	0.6311		-
rs149561471	5:145523336	T/G	LARS	intron	0.667	1.07047	0.0570	0.2319		-
rs149887540	5:145540583	T/C	LARS	intron	0.698	1.03666	0.0669	0.5904		-
rs150782702	5:145536034	A/G	LARS	intron	0.975	1.00290	0.0213	0.8929		-
rs17104250	5:145500101	C/G	LARS	intron	0.974	0.99581	0.0211	0.8428		7
rs17104255	5:145502957	A/G	LARS	intron	0.996	0.99571	0.0110	0.6948		7
rs17104260	5:145507741	T/C	LARS	intron	0.974	1.00421	0.0211	0.841		7
rs17104264	5:145507901	T/C	LARS	intron	0.974	1.00411	0.0211	0.8473		7
rs17104266	5:145509380	A/G	LARS	intron	0.975	0.99740	0.0213	0.9019		5
rs17104268	5:145509728	A/C	LARS	intron	0.975	1.00290	0.0213	0.8923		6
rs17104276	5:145522926	A/C	LARS	intron	0.975	1.00270	0.0213	0.8998		6
rs17427286	5:145505337	A/G	LARS	intron	1.000	1.00582	0.0116	0.6185		7
rs17427691	5:145510176	A/G	LARS	intron	1.000	0.99412	0.0116	0.614		2b
rs17428100	5:145517253	A/T	LARS	intron	1.000	0.99422	0.0116	0.6182		6
rs17428465	5:145532927	T/C	LARS	intron	1.000	0.99432	0.0116	0.6263		6
rs17428570	5:145537567	T/C	LARS	intron	1.000	0.99471	0.0116	0.6509		7
rs17492851	5:145504347	A/C	LARS	intron	1.000	0.99422	0.0116	0.6165		5
rs17492893	5:145504426	A/G	LARS	intron	1.000	0.99382	0.0116	0.5971		5
rs17492950	5:145504688	T/C	LARS	intron	0.996	0.99561	0.0110	0.6873		6
rs17493090	5:145506602	A/G	LARS	intron	1.000	1.00582	0.0116	0.6183		7
rs17493851	5:145519821	A/G	LARS	coding-synon	1.000	1.00582	0.0116	0.6183		6
rs17500456	5:145531113	C/G	LARS	intron	1.000	1.00572	0.0116	0.6242		7
rs17500483	5:145532859	T/C	LARS	intron	0.995	0.99611	0.0110	0.7242		7
rs17500504	5:145532876	A/G	LARS	intron	1.000	0.99432	0.0116	0.6263		7
rs180762316	5:145539189	T/C	LARS	intron	0.628	0.99681	0.0528	0.9518		-
rs181008052	5:145558519	C/G	LARS	intron	0.618	0.89369	0.0657	0.08684		-
rs182801361	5:145540219	A/C	LARS	intron	0.968	1.01045	0.0120	0.3844		-
rs184291911	5:145547343	T/C	LARS	intron	0.691	1.01979	0.0344	0.5687		-
rs2063005	5:145548460	T/C	LARS	intron	0.996	1.00421	0.0110	0.7039		6
rs2292172	5:145529572	T/C	LARS	intron	1.000	1.00572	0.0116	0.6234		7
rs2292173	5:145529556	A/G	LARS	intron	1.000	0.99432	0.0116	0.6235		6
rs2400211	5:145524513	T/C	LARS	intron	0.968	1.00783	0.0120	0.5117		7
rs2895647	5:145508340	A/G	LARS	coding-synon	1.000	0.99471	0.0116	0.65		7
rs2895648	5:145508457	T/C	LARS	intron	1.000	0.99422	0.0116	0.6186		6
rs2895649	5:145508471	T/C	LARS	intron	1.000	0.99422	0.0116	0.6175		6
rs2895650	5:145524692	C/G	LARS	intron	1.000	1.00541	0.0117	0.6434		7
rs2939527	5:145518742	A/G	LARS	intron	0.952	0.99045	0.0117	0.4145		6
rs2939535	5:145554549	A/G	LARS	intron	0.992	0.99621	0.0110	0.7334		6
rs2939536	5:145539259	C/G	LARS	intron	1.000	0.99382	0.0116	0.5953		7
rs2939539	5:145541857	T/G	LARS	intron	0.991	1.00451	0.0111	0.6814		7
rs2962503	5:145518320	A/G	LARS	intron	0.996	1.00451	0.0110	0.6837		5
rs2962509	5:145543579	A/G	LARS	intron	0.996	0.99611	0.0110	0.7213		6
rs2962510	5:145550813	A/G	LARS	intron	0.992	0.99491	0.0110	0.6456		6
rs2962511	5:145552542	T/C	LARS	intron	0.995	1.00411	0.0110	0.7084		7
rs2962515	5:145561207	T/C	LARS	intron	0.996	0.99442	0.0117	0.6292		4
rs2963911	5:145552780	A/G	LARS	intron	1.000	1.00632	0.0117	0.5863		4
rs2963914	5:145534017	A/C	LARS	intron	0.995	0.99461	0.0110	0.6213		6
rs2963915	5:145531921	A/G	LARS	intron	0.997	0.99551	0.0110	0.6811		7
rs2963918	5:145516389	A/G	LARS	intron	0.996	0.99551	0.0110	0.6841		6
rs2963919	5:145515379	T/C	LARS	intron	0.995	0.99571	0.0110	0.6934		7
rs2963920	5:145514649	T/C	LARS	intron	0.996	0.99561	0.0110	0.689		7
rs2963921	5:145513868	A/C	LARS	intron	0.997	0.99541	0.0110	0.6763		7
rs2963922	5:145513676	C/G	LARS	intron	0.997	0.99561	0.0110	0.6908		6
rs2963923	5:145511702	T/C	LARS	intron	0.995	0.99551	0.0110	0.6834		6
rs2963924	5:145511343	A/G	LARS	intron	1.000	1.00652	0.0116	0.5762		7
rs33914983	5:145559592	T/C	LARS	intron	0.997	0.99481	0.0117	0.6542		5
rs34014355	5:145556237	A/G	LARS	intron	0.997	0.99481	0.0117	0.6545		6
rs34049009	5:145521654	T/C	LARS	intron	1.000	1.00582	0.0116	0.6188		7
rs34272709	5:145535976	C/G	LARS	intron	1.000	1.00552	0.0116	0.6346		7
rs34342344	5:145533418	A/T	LARS	intron	1.000	1.00572	0.0116	0.6273		7
rs34345997	5:145546458	T/C	LARS	intron	1.000	1.00531	0.0116	0.6522		7
rs34404385	5:145546258	A/C	LARS	intron	1.000	0.99481	0.0116	0.6527		6
rs34461274	5:145518919	A/G	LARS	intron	0.980	0.99541	0.0119	0.6979		6
rs34482773	5:145535992	T/C	LARS	intron	0.995	0.99312	0.0117	0.5561		7
rs34529192	5:145526608	T/C	LARS	intron	1.000	1.00582	0.0116	0.6215		6
rs34581962	5:145545432	T/C	LARS	intron	1.000	1.00531	0.0116	0.6522		4
rs34672485	5:145547167	A/C	LARS	intron	0.985	1.00481	0.0118	0.6852		7
rs34683303	5:145507406	T/G	LARS	intron	1.000	0.99392	0.0117	0.6034		7
rs34706167	5:145532103	A/C	LARS	intron	0.755	0.95945	0.0676	0.5408		5
rs34774165	5:145521133	A/G	LARS	intron	1.000	0.99422	0.0116	0.6199		7
rs34794113	5:145547159	A/G	LARS	intron	0.985	0.99521	0.0118	0.6861		7
rs34794547	5:145510123	A/T	LARS	intron	1.000	0.99412	0.0116	0.614		4
rs35048100	5:145521579	T/C	LARS	intron	0.996	1.00381	0.0110	0.7292		7
rs35048686	5:145559423	T/C	LARS	intron	0.997	0.99471	0.0117	0.6498		5
rs35131794	5:145541415	A/G	LARS	intron	0.892	0.99571	0.0117	0.7165		7
rs35185759	5:145541101	A/G	LARS	intron	0.953	0.99173	0.0122	0.4934		7
rs35238125	5:145533956	A/G	LARS	intron	1.000	0.99442	0.0116	0.629		6
rs35262581	5:145549763	C/G	LARS	intron	1.000	1.00531	0.0117	0.6478		6
rs35421100	5:145556140	T/C	LARS	intron	0.997	1.00521	0.0117	0.6537		6
rs35421875	5:145540923	A/T	LARS	intron	1.000	0.99452	0.0116	0.6365		6
rs35424128	5:145510806	A/G	LARS	intron	0.992	0.99601	0.0117	0.73		7
rs35436549	5:145544566	T/C	LARS	intron	1.000	0.99481	0.0116	0.6527		6
rs35581472	5:145544674	A/G	LARS	intron	0.938	0.99064	0.0124	0.4471		7
rs35658996	5:145526827	C/G	LARS	intron	1.000	0.99432	0.0116	0.6222		6
rs35749752	5:145553402	C/G	LARS	intron	0.999	1.00521	0.0117	0.6569		4
rs35821418	5:145547041	A/G	LARS	intron	1.000	0.99481	0.0116	0.6527		7
rs35825928	5:145507654	C/G	LARS	intron	1.000	0.99422	0.0116	0.6186		6
rs35868039	5:145516965	A/G	LARS	intron	1.000	1.00582	0.0116	0.6176		7
rs35869904	5:145512390	C/G	LARS	intron	1.000	1.00602	0.0117	0.6058		6
rs36059140	5:145534140	T/C	LARS	intron	1.000	1.00562	0.0116	0.6297		7
rs36095232	5:145545671	A/G	LARS	intron	1.000	0.99481	0.0116	0.6527		5
rs36098188	5:145510143	T/C	LARS	intron	1.000	1.00592	0.0116	0.614		4
rs36102990	5:145538047	A/C	LARS	intron	1.000	1.00541	0.0116	0.6409		5
rs36122632	5:145523520	A/G	LARS	intron	0.997	1.00622	0.0117	0.5957		7
rs3797628	5:145512807	T/C	LARS	intron	1.000	0.99412	0.0116	0.6126		7
rs3822623	5:145513033	A/G	LARS	intron	1.000	0.99422	0.0116	0.6175		6
rs3828935	5:145551181	A/C	LARS	intron	1.000	1.00552	0.0117	0.6383		6
rs4413574	5:145556744	A/G	LARS	intron	0.989	0.99651	0.0118	0.766		5
rs4443471	5:145556986	A/G	LARS	intron	0.997	1.00521	0.0117	0.6541		6
rs4705119	5:145552776	A/G	LARS	intron	1.000	1.00572	0.0117	0.6253		4
rs4705398	5:145544766	A/G	LARS	intron	1.000	0.99481	0.0116	0.6527		7
rs4705438	5:145552906	T/C	LARS	intron	1.000	0.99432	0.0117	0.6246		3a
rs61115635	5:145553233	T/C	LARS	intron	0.630	1.02081	0.0188	0.2728		4
rs61732382	5:145508637	A/C	LARS	coding-synon	0.892	0.98906	0.0130	0.3976		6
rs61732383	5:145508636	T/C	LARS	missense	0.892	0.98906	0.0130	0.3976		6
rs62373771	5:145511862	T/C	LARS	intron	0.969	0.99302	0.0120	0.5614		7
rs62373773	5:145514420	A/G	LARS	intron	0.976	0.99312	0.0119	0.5638		7
rs62373774	5:145514426	T/C	LARS	intron	0.976	1.00692	0.0119	0.5626		6
rs62373785	5:145535518	A/G	LARS	intron	1.000	0.99452	0.0116	0.6339		6
rs62373786	5:145535779	T/C	LARS	intron	1.000	1.00552	0.0116	0.6343		7
rs62373789	5:145539339	T/G	LARS	intron	1.000	0.99461	0.0116	0.6441		6
rs62373794	5:145544646	A/C	LARS	intron	0.928	0.99124	0.0125	0.4825		7
rs62373795	5:145544647	T/C	LARS	intron	0.928	0.99124	0.0125	0.4832		7
rs62373798	5:145546680	A/G	LARS	intron	1.000	1.00531	0.0116	0.6522		6
rs62373799	5:145549268	T/C	LARS	intron	0.995	1.00491	0.0117	0.6744		7
rs62373801	5:145550668	C/G	LARS	intron	1.000	0.99452	0.0117	0.6355		6
rs62373802	5:145550720	A/G	LARS	intron	1.000	1.00562	0.0117	0.6296		6
rs62373809	5:145554718	A/G	LARS	intron	0.980	1.00521	0.0119	0.6626		7
rs62373810	5:145555060	A/G	LARS	intron	0.980	0.99481	0.0119	0.6584		6
rs62373811	5:145555174	A/G	LARS	intron	0.981	0.99511	0.0119	0.6767		7
rs62373812	5:145555285	A/G	LARS	intron	0.985	1.00461	0.0118	0.6943		7
rs62373813	5:145555322	T/C	LARS	intron	0.984	1.00411	0.0118	0.7259		6
rs66507348	5:145527627	T/C	LARS	intron	0.974	0.99571	0.0211	0.8382		7
rs66538287	5:145521866	T/C	LARS	intron	1.000	1.00582	0.0116	0.6189		7
rs66891285	5:145540375	A/G	LARS	intron	0.974	1.00441	0.0211	0.8353		6
rs67051761	5:145549205	A/G	LARS	intron	0.998	1.00471	0.0117	0.6874		7
rs67303470	5:145550044	A/G	LARS	intron	0.683	0.99442	0.0191	0.768		6
rs67598659	5:145519603	T/C	LARS	intron	1.000	1.00582	0.0116	0.6183		6
rs67721586	5:145542125	T/C	LARS	intron	0.974	0.99541	0.0211	0.8286		6
rs67897591	5:145541145	A/G	LARS	intron	0.974	1.00461	0.0211	0.8278		6
rs67986716	5:145539222	T/C	LARS	intron	1.000	0.99501	0.0117	0.6699		7
rs6871866	5:145542005	T/C	LARS	intron	0.974	1.00461	0.0211	0.8278		7
rs6882243	5:145558329	T/C	LARS	intron	0.977	0.99551	0.0213	0.8315		7
rs71594528	5:145559965	T/C	LARS	intron	0.997	1.00521	0.0117	0.6542		6
rs72822208	5:145512157	T/C	LARS	intron	0.975	1.00260	0.0213	0.9013		7
rs72822249	5:145524690	C/G	LARS	intron	0.974	0.99661	0.0214	0.873		7
rs72822252	5:145524824	T/G	LARS	intron	0.973	1.00280	0.0213	0.8958		6
rs72822255	5:145527666	A/G	LARS	intron	0.637	0.97453	0.0347	0.4572		7
rs72822263	5:145532226	C/G	LARS	intron	0.974	1.00341	0.0214	0.8736		5
rs72822274	5:145538828	T/C	LARS	intron	0.975	0.99710	0.0213	0.8932		7
rs72822286	5:145542880	A/C	LARS	intron	1.000	0.99471	0.0116	0.6509		7
rs72822293	5:145547839	T/C	LARS	intron	0.975	1.00260	0.0213	0.9026		7
rs72822296	5:145549968	T/C	LARS	intron	0.975	1.00250	0.0213	0.9052		6
rs72824110	5:145560420	A/G	LARS	intron	0.977	0.99551	0.0213	0.8314		7
rs76304107	5:145519577	C/G	LARS	intron	0.635	0.97844	0.0186	0.2405		7
rs78566110	5:145546143	A/G	LARS	intron	0.608	1.01816	0.0221	0.4162		7
rs79194156	5:145551085	A/G	LARS	intron	0.932	0.98452	0.0331	0.6376		6
rs79270245	5:145561200	A/G	LARS	intron	0.616	0.88577	0.0647	0.06076		4
rs80131118	5:145530596	A/G	LARS	intron	0.815	0.94327	0.0589	0.3219		7
rs80286736	5:145500638	T/G	LARS	intron	0.636	1.02000	0.0186	0.2866		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information