KCTD13

Basic Information

Gene Symbol	KCTD13
Entrez Id	253980
Position	chr16:29917660..29937545
Description	potassium channel tetramerization domain containing 13
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs117590634	16:29934113	C/G	KCTD13	intron	0.609	0.91567	0.0398	0.02694		7
rs12596042	16:29934754	A/T	KCTD13	intron	0.994	0.93754	0.0106	1.033E-9		6
rs12716972	16:29936654	A/G	KCTD13	intron	0.995	1.06439	0.0106	3.585E-9		1f
rs12932403	16:29934050	A/G	KCTD13	intron	0.962	1.06609	0.0107	2.534E-9		6
rs35345720	16:29933603	A/T	KCTD13	intron	0.854	0.93979	0.0290	0.03214		7
rs72798151	16:29933890	T/C	KCTD13	intron	0.646	0.98108	0.0323	0.5547		6
rs75549506	16:29933739	A/T	KCTD13	intron	0.735	1.05517	0.0244	0.02745		7
rs80273739	16:29933901	A/G	KCTD13	intron	0.679	1.05306	0.0329	0.1164		7
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

Reference	Study type	Sample size
19855392	Regional	4551 cases; 6391 controls
Reference	Study type	Sample size

eQTL Information