Gene Symbol | IL1B |
---|---|
Entrez Id | 3553 |
Position | chr2:113587337..113594356 |
Description | interleukin 1, beta |
Gene type | protein-coding |
SNP | Position | Alelle | Gene | Annotation | Info | Or | Se | P-value | eQTL | Score* |
---|---|---|---|---|---|---|---|---|---|---|
rs3136557 | 2:113591342 | A/G | IL1B | intron | 0.947 | 0.97521 | 0.0143 | 0.07972 | ![]() | 5 |
rs3136558 | 2:113591275 | A/G | IL1B | intron | 0.952 | 1.02255 | 0.0125 | 0.07583 | ![]() | 5 |
rs3917356 | 2:113592363 | T/C | IL1B | intron | 0.990 | 1.00541 | 0.0106 | 0.6123 | ![]() | 2b |
SNP | Position | Alelle | Gene | Annotation | Info | Or | Se | P-value | eQTL | Score* |
score | supporting data | score | supporting data |
---|---|---|---|
1a | eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak | 6 | other |
2a | TF binding + matched TF motif + matched DNase Footprint + DNase peak | 5 | TF binding or DNase peak |
1b | eQTL + TF binding + any motif + DNase Footprint + DNase peak | 4 | TF binding + DNase peak |
2b | TF binding + any motif + DNase Footprint + DNase peak | 3b | TF binding + matched TF motif |
1c | eQTL + TF binding + matched TF motif + DNase peak | 1f | eQTL + TF binding / DNase peak |
2c | TF binding + matched TF motif + DNase peak | 3a | TF binding + any motif + DNase peak |
1d | eQTL + TF binding + any motif + DNase peak | 1e | eQTL + TF binding + matched TF motif |
The gene is not affected by CNV!