IL1A

Basic Information

Gene Symbol	IL1A
Entrez Id	3552
Position	chr2:113531492..113542971
Description	interleukin 1, alpha
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs112022400	2:113538194	A/G	IL1A	intron	0.807	0.99710	0.0609	0.9616		5
rs13000462	2:113534024	T/C	IL1A	intron	0.980	0.99760	0.0115	0.8315		5
rs1533463	2:113538782	A/G	IL1A	intron	0.999	0.99990	0.0114	0.9899		5
rs1609682	2:113540205	T/G	IL1A	intron	0.999	0.99970	0.0114	0.9822		4
rs17561	2:113537223	A/C	IL1A	missense	0.997	0.98728	0.0116	0.2693		3a
rs1969294	2:113538490	A/G	IL1A	intron	0.966	1.00531	0.0113	0.6375		6
rs2071373	2:113540084	A/G	IL1A	intron	0.999	0.99990	0.0114	0.9944		5
rs2071374	2:113537352	T/G	IL1A	intron	0.998	0.99511	0.0119	0.6785		5
rs2071375	2:113535438	T/C	IL1A	intron	0.997	0.98699	0.0116	0.2615		6
rs2071376	2:113535395	T/G	IL1A	intron	0.999	0.99960	0.0114	0.9714		7
rs2856838	2:113539972	A/G	IL1A	intron	0.999	1.01096	0.0109	0.3149		4
rs2856841	2:113537339	A/G	IL1A	intron	0.997	1.01329	0.0116	0.2554		4
rs3783525	2:113541819	A/T	IL1A	intron	0.999	0.99950	0.0114	0.9657		5
rs3783526	2:113541807	T/C	IL1A	intron	0.999	1.00010	0.0115	0.9914		7
rs3783533	2:113538779	A/G	IL1A	intron	0.999	0.99970	0.0114	0.9786		5
rs3783538	2:113538195	A/G	IL1A	intron	0.831	1.01826	0.0582	0.755		5
rs3783539	2:113537579	T/C	IL1A	intron	0.999	1.00020	0.0115	0.9886		7
rs3783543	2:113536651	A/G	IL1A	intron	1.000	0.99980	0.0114	0.9839		5
rs3783546	2:113534830	C/G	IL1A	intron	0.999	0.99960	0.0114	0.971		4
rs3783547	2:113533339	A/G	IL1A	intron	0.996	0.98886	0.0109	0.3051		5
rs3783548	2:113533333	A/G	IL1A	intron	0.790	1.01339	0.0211	0.5285		5
rs3783550	2:113532885	T/G	IL1A	intron	0.999	0.99980	0.0114	0.9853		5
rs41294734	2:113536635	T/C	IL1A	intron	0.893	0.98511	0.0454	0.7412		5
rs41294736	2:113531947	C/G	IL1A	untranslated-3	0.837	1.01227	0.0449	0.7853		7
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information